RNA–Protein interactions for RNA: ENST00000390447.3

TRAV19-201, Transcript of T cell receptor alpha variable 19, humanhuman

APPRIS P1 BASIC

Gene TRAV19, Length 467 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19-201ENST00000390447 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
TRAV19-201ENST00000390447 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
TRAV19-201ENST00000390447 ARAP1Q96P48 1450 aa10.47□□□□□ -0.73
TRAV19-201ENST00000390447 WDR62O43379 1518 aa10.47□□□□□ -0.73
TRAV19-201ENST00000390447 GAPVD1Q14C86 1478 aa10.46□□□□□ -0.74
TRAV19-201ENST00000390447 APLP2Q06481 763 aa10.44□□□□□ -0.74
TRAV19-201ENST00000390447 PPARGC1BQ86YN6 1023 aaKnown RBP10.44□□□□□ -0.74
TRAV19-201ENST00000390447 ARHGAP35Q9NRY4 1499 aa10.43□□□□□ -0.74
TRAV19-201ENST00000390447 SCAF1Q9H7N4 1312 aaKnown RBP10.43□□□□□ -0.74
TRAV19-201ENST00000390447 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
TRAV19-201ENST00000390447 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
TRAV19-201ENST00000390447 EFCAB5A4FU69 1503 aa10.42□□□□□ -0.74
TRAV19-201ENST00000390447 ERCC6Q03468 1493 aa10.42□□□□□ -0.74
TRAV19-201ENST00000390447 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
TRAV19-201ENST00000390447 IFT140Q96RY7 1462 aa10.41□□□□□ -0.74
TRAV19-201ENST00000390447 TDRD9Q8NDG6 1382 aaKnown RBP10.4□□□□□ -0.74
TRAV19-201ENST00000390447 ADAMTS12P58397 1594 aa10.39□□□□□ -0.75
TRAV19-201ENST00000390447 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
TRAV19-201ENST00000390447 FHAD1B1AJZ9 1412 aa10.36□□□□□ -0.75
TRAV19-201ENST00000390447 ZEB1P37275 1124 aaPredicted RBP10.36□□□□□ -0.75
TRAV19-201ENST00000390447 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
TRAV19-201ENST00000390447 TTBK1Q5TCY1 1321 aaPredicted RBP10.35□□□□□ -0.75
TRAV19-201ENST00000390447 MAP3K1Q13233 1512 aa10.35□□□□□ -0.75
TRAV19-201ENST00000390447 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
TRAV19-201ENST00000390447 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
TRAV19-201ENST00000390447 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
TRAV19-201ENST00000390447 PCF11O94913 1555 aaKnown RBP10.32□□□□□ -0.76
TRAV19-201ENST00000390447 TIAM1Q13009 1591 aa10.32□□□□□ -0.76
TRAV19-201ENST00000390447 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAV19-201ENST00000390447 ZNF608Q9ULD9 1512 aaPredicted RBP10.3□□□□□ -0.76
TRAV19-201ENST00000390447 IQGAP2Q13576 1575 aa10.3□□□□□ -0.76
TRAV19-201ENST00000390447 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
TRAV19-201ENST00000390447 FMN1Q68DA7 1419 aa10.29□□□□□ -0.76
TRAV19-201ENST00000390447 FHOD3Q2V2M9 1422 aa10.28□□□□□ -0.76
TRAV19-201ENST00000390447 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
TRAV19-201ENST00000390447 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.77
TRAV19-201ENST00000390447 CASKIN1Q8WXD9 1431 aa10.26□□□□□ -0.77
TRAV19-201ENST00000390447 RRBP1Q9P2E9 1410 aaKnown RBP10.24□□□□□ -0.77
TRAV19-201ENST00000390447 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
TRAV19-201ENST00000390447 LRRC9Q6ZRR7 1453 aa10.23□□□□□ -0.77
TRAV19-201ENST00000390447 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
TRAV19-201ENST00000390447 P3H3Q8IVL6 736 aa10.23□□□□□ -0.77
TRAV19-201ENST00000390447 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
TRAV19-201ENST00000390447 LRRIQ1Q96JM4 1722 aa10.22□□□□□ -0.77
TRAV19-201ENST00000390447 SYNJ2O15056 1496 aa10.22□□□□□ -0.77
TRAV19-201ENST00000390447 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
TRAV19-201ENST00000390447 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.77
TRAV19-201ENST00000390447 KIAA0586Q9BVV6 1533 aa10.21□□□□□ -0.78
TRAV19-201ENST00000390447 KIAA0556O60303 1618 aa10.19□□□□□ -0.78
TRAV19-201ENST00000390447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
TRAV19-201ENST00000390447 CCDC18Q5T9S5 1454 aa10.18□□□□□ -0.78
TRAV19-201ENST00000390447 CCNB3Q8WWL7 1395 aa10.18□□□□□ -0.78
TRAV19-201ENST00000390447 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
TRAV19-201ENST00000390447 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
TRAV19-201ENST00000390447 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
TRAV19-201ENST00000390447 ATP1B4Q9UN42 357 aaPredicted RBP10.17□□□□□ -0.78
TRAV19-201ENST00000390447 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
TRAV19-201ENST00000390447 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
TRAV19-201ENST00000390447 NUP160Q12769 1436 aa10.14□□□□□ -0.79
TRAV19-201ENST00000390447 DISP1Q96F81 1524 aa10.13□□□□□ -0.79
TRAV19-201ENST00000390447 RAPGEF6Q8TEU7 1601 aa10.13□□□□□ -0.79
TRAV19-201ENST00000390447 CHD1O14646 1710 aa10.13□□□□□ -0.79
TRAV19-201ENST00000390447 MTUS2Q5JR59 1369 aa10.13□□□□□ -0.79
TRAV19-201ENST00000390447 PHLDB1Q86UU1 1377 aa10.12□□□□□ -0.79
TRAV19-201ENST00000390447 EPRSP07814 1512 aaKnown RBP10.11□□□□□ -0.79
TRAV19-201ENST00000390447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAV19-201ENST00000390447 CARMIL2Q6F5E8 1435 aa10.09□□□□□ -0.79
TRAV19-201ENST00000390447 FBLN2P98095 1184 aa10.08□□□□□ -0.8
TRAV19-201ENST00000390447 NCOA2Q15596 1464 aa10.08□□□□□ -0.8
TRAV19-201ENST00000390447 FGD6Q6ZV73 1430 aa10.07□□□□□ -0.8
TRAV19-201ENST00000390447 ARHGEF11O15085 1522 aa10.07□□□□□ -0.8
TRAV19-201ENST00000390447 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
TRAV19-201ENST00000390447 MYOM3Q5VTT5 1437 aa10.07□□□□□ -0.8
TRAV19-201ENST00000390447 CDK13Q14004 1512 aaKnown RBP10.06□□□□□ -0.8
TRAV19-201ENST00000390447 CLSPNQ9HAW4 1339 aa10.06□□□□□ -0.8
TRAV19-201ENST00000390447 PTPN23Q9H3S7 1636 aa10.05□□□□□ -0.8
TRAV19-201ENST00000390447 FAM50AQ14320 339 aaKnown RBP10.04□□□□□ -0.8
TRAV19-201ENST00000390447 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
TRAV19-201ENST00000390447 JPH4Q96JJ6 628 aa10.03□□□□□ -0.8
TRAV19-201ENST00000390447 SHROOM2Q13796 1616 aa10.03□□□□□ -0.8
TRAV19-201ENST00000390447 DHX57Q6P158 1386 aaKnown RBP10.02□□□□□ -0.8
TRAV19-201ENST00000390447 SETD5Q9C0A6 1442 aa10.02□□□□□ -0.81
TRAV19-201ENST00000390447 ITGAEP38570 1179 aa10.02□□□□□ -0.81
TRAV19-201ENST00000390447 ADCY10Q96PN6 1610 aa10.02□□□□□ -0.81
TRAV19-201ENST00000390447 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
TRAV19-201ENST00000390447 ABCA8O94911 1581 aa10.01□□□□□ -0.81
TRAV19-201ENST00000390447 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
TRAV19-201ENST00000390447 MIA2Q96PC5 1412 aa10□□□□□ -0.81
TRAV19-201ENST00000390447 CDK11AQ9UQ88 783 aaPredicted RBP10□□□□□ -0.81
TRAV19-201ENST00000390447 RAB3GAP2Q9H2M9 1393 aa10□□□□□ -0.81
TRAV19-201ENST00000390447 PLB1Q6P1J6 1458 aa9.99□□□□□ -0.81
TRAV19-201ENST00000390447 GCC2Q8IWJ2 1684 aa9.99□□□□□ -0.81
TRAV19-201ENST00000390447 TROQ12816 1431 aaPredicted RBP9.98□□□□□ -0.81
TRAV19-201ENST00000390447 PRG4Q92954 1404 aaPredicted RBP9.98□□□□□ -0.81
TRAV19-201ENST00000390447 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
TRAV19-201ENST00000390447 KIF14Q15058 1648 aa9.96□□□□□ -0.82
TRAV19-201ENST00000390447 HOXD11P31277 338 aaPredicted RBP9.95□□□□□ -0.82
TRAV19-201ENST00000390447 HFM1A2PYH4 1435 aa9.95□□□□□ -0.82
TRAV19-201ENST00000390447 DNMT1P26358 1616 aaKnown RBP9.94□□□□□ -0.82
TRAV19-201ENST00000390447 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms