RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
TRAV6-201ENST00000390428 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
TRAV6-201ENST00000390428 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
TRAV6-201ENST00000390428 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
TRAV6-201ENST00000390428 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
TRAV6-201ENST00000390428 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
TRAV6-201ENST00000390428 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
TRAV6-201ENST00000390428 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
TRAV6-201ENST00000390428 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
TRAV6-201ENST00000390428 FBLN2P98095 1184 aa14.17□□□□□ -0.14
TRAV6-201ENST00000390428 CHD1O14646 1710 aa14.17□□□□□ -0.14
TRAV6-201ENST00000390428 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
TRAV6-201ENST00000390428 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAV6-201ENST00000390428 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
TRAV6-201ENST00000390428 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
TRAV6-201ENST00000390428 SOGA1O94964 1423 aa14.08□□□□□ -0.15
TRAV6-201ENST00000390428 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
TRAV6-201ENST00000390428 WDR97A6NE52 1622 aa14.06□□□□□ -0.16
TRAV6-201ENST00000390428 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
TRAV6-201ENST00000390428 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
TRAV6-201ENST00000390428 CUX1P39880 1505 aa14.04□□□□□ -0.16
TRAV6-201ENST00000390428 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
TRAV6-201ENST00000390428 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.16
TRAV6-201ENST00000390428 ARAP1Q96P48 1450 aa14.02□□□□□ -0.16
TRAV6-201ENST00000390428 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
TRAV6-201ENST00000390428 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
TRAV6-201ENST00000390428 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
TRAV6-201ENST00000390428 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
TRAV6-201ENST00000390428 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
TRAV6-201ENST00000390428 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
TRAV6-201ENST00000390428 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
TRAV6-201ENST00000390428 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
TRAV6-201ENST00000390428 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
TRAV6-201ENST00000390428 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
TRAV6-201ENST00000390428 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
TRAV6-201ENST00000390428 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.18
TRAV6-201ENST00000390428 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
TRAV6-201ENST00000390428 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.19
TRAV6-201ENST00000390428 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
TRAV6-201ENST00000390428 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
TRAV6-201ENST00000390428 SSUH2Q9Y2M2 353 aa13.85□□□□□ -0.19
TRAV6-201ENST00000390428 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
TRAV6-201ENST00000390428 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
TRAV6-201ENST00000390428 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
TRAV6-201ENST00000390428 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
TRAV6-201ENST00000390428 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
TRAV6-201ENST00000390428 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
TRAV6-201ENST00000390428 POTEHQ6S545 545 aa13.78□□□□□ -0.2
TRAV6-201ENST00000390428 CEP170Q5SW79 1584 aa13.76□□□□□ -0.21
TRAV6-201ENST00000390428 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
TRAV6-201ENST00000390428 NUP160Q12769 1436 aa13.75□□□□□ -0.21
TRAV6-201ENST00000390428 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
TRAV6-201ENST00000390428 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
TRAV6-201ENST00000390428 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
TRAV6-201ENST00000390428 SHROOM2Q13796 1616 aa13.72□□□□□ -0.21
TRAV6-201ENST00000390428 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
TRAV6-201ENST00000390428 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
TRAV6-201ENST00000390428 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
TRAV6-201ENST00000390428 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
TRAV6-201ENST00000390428 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
TRAV6-201ENST00000390428 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
TRAV6-201ENST00000390428 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
TRAV6-201ENST00000390428 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
TRAV6-201ENST00000390428 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAV6-201ENST00000390428 CUL7Q14999 1698 aa13.53□□□□□ -0.24
TRAV6-201ENST00000390428 IGF1RP08069 1367 aa13.53□□□□□ -0.24
TRAV6-201ENST00000390428 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
TRAV6-201ENST00000390428 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
TRAV6-201ENST00000390428 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
TRAV6-201ENST00000390428 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
TRAV6-201ENST00000390428 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAV6-201ENST00000390428 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
TRAV6-201ENST00000390428 FAM69CQ0P6D2 419 aa13.46□□□□□ -0.25
TRAV6-201ENST00000390428 DIP2BQ9P265 1576 aa13.45□□□□□ -0.26
TRAV6-201ENST00000390428 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
TRAV6-201ENST00000390428 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
TRAV6-201ENST00000390428 PROM2Q8N271 834 aa13.42□□□□□ -0.26
TRAV6-201ENST00000390428 TSPOAP1O95153 1857 aa13.41□□□□□ -0.26
TRAV6-201ENST00000390428 PTPRGP23470 1445 aa13.39□□□□□ -0.27
TRAV6-201ENST00000390428 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
TRAV6-201ENST00000390428 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
TRAV6-201ENST00000390428 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
TRAV6-201ENST00000390428 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
TRAV6-201ENST00000390428 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
TRAV6-201ENST00000390428 KDM6BO15054 1643 aa13.35□□□□□ -0.27
TRAV6-201ENST00000390428 FKBP8Q14318 412 aa13.35□□□□□ -0.27
TRAV6-201ENST00000390428 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
TRAV6-201ENST00000390428 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
TRAV6-201ENST00000390428 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
TRAV6-201ENST00000390428 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
TRAV6-201ENST00000390428 UHRF1BP1LA0JNW5 1464 aa13.31□□□□□ -0.28
TRAV6-201ENST00000390428 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
TRAV6-201ENST00000390428 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
TRAV6-201ENST00000390428 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
TRAV6-201ENST00000390428 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
TRAV6-201ENST00000390428 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
TRAV6-201ENST00000390428 GLI2P10070 1586 aa13.29□□□□□ -0.28
TRAV6-201ENST00000390428 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
TRAV6-201ENST00000390428 KIAA0556O60303 1618 aa13.27□□□□□ -0.29
TRAV6-201ENST00000390428 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 396.6 ms