RNA–Protein interactions for RNA: ENST00000381227.5

POLR2B-202, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene POLR2B, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-202ENST00000381227 SCAF1Q9H7N4 1312 aaKnown RBP9.58□□□□□ -0.88
POLR2B-202ENST00000381227 NEUROD1Q13562 356 aa9.58□□□□□ -0.88
POLR2B-202ENST00000381227 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
POLR2B-202ENST00000381227 MRC2Q9UBG0 1479 aa9.56□□□□□ -0.88
POLR2B-202ENST00000381227 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
POLR2B-202ENST00000381227 THOC2Q8NI27 1593 aaKnown RBP9.54□□□□□ -0.88
POLR2B-202ENST00000381227 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
POLR2B-202ENST00000381227 CCNB3Q8WWL7 1395 aa9.54□□□□□ -0.88
POLR2B-202ENST00000381227 MIER1Q8N108 512 aa9.54□□□□□ -0.88
POLR2B-202ENST00000381227 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
POLR2B-202ENST00000381227 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
POLR2B-202ENST00000381227 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
POLR2B-202ENST00000381227 ABCA10Q8WWZ4 1543 aa9.52□□□□□ -0.89
POLR2B-202ENST00000381227 WDR62O43379 1518 aa9.51□□□□□ -0.89
POLR2B-202ENST00000381227 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
POLR2B-202ENST00000381227 FHAD1B1AJZ9 1412 aa9.48□□□□□ -0.89
POLR2B-202ENST00000381227 GAPVD1Q14C86 1478 aa9.48□□□□□ -0.89
POLR2B-202ENST00000381227 ARHGAP35Q9NRY4 1499 aa9.48□□□□□ -0.89
POLR2B-202ENST00000381227 MTUS2Q5JR59 1369 aa9.48□□□□□ -0.89
POLR2B-202ENST00000381227 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.89
POLR2B-202ENST00000381227 FHOD3Q2V2M9 1422 aa9.46□□□□□ -0.89
POLR2B-202ENST00000381227 ABCA5Q8WWZ7 1642 aa9.46□□□□□ -0.9
POLR2B-202ENST00000381227 FBLN2P98095 1184 aa9.46□□□□□ -0.9
POLR2B-202ENST00000381227 DHX57Q6P158 1386 aaKnown RBP9.45□□□□□ -0.9
POLR2B-202ENST00000381227 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
POLR2B-202ENST00000381227 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
POLR2B-202ENST00000381227 RAB3GAP2Q9H2M9 1393 aa9.43□□□□□ -0.9
POLR2B-202ENST00000381227 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
POLR2B-202ENST00000381227 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
POLR2B-202ENST00000381227 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
POLR2B-202ENST00000381227 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
POLR2B-202ENST00000381227 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
POLR2B-202ENST00000381227 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
POLR2B-202ENST00000381227 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
POLR2B-202ENST00000381227 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
POLR2B-202ENST00000381227 DDX10Q13206 875 aaKnown RBP9.39□□□□□ -0.91
POLR2B-202ENST00000381227 AEBP2Q6ZN18 517 aaPredicted RBP9.39□□□□□ -0.91
POLR2B-202ENST00000381227 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
POLR2B-202ENST00000381227 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
POLR2B-202ENST00000381227 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
POLR2B-202ENST00000381227 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
POLR2B-202ENST00000381227 FMN1Q68DA7 1419 aa9.37□□□□□ -0.91
POLR2B-202ENST00000381227 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
POLR2B-202ENST00000381227 GRIN2BQ13224 1484 aa9.36□□□□□ -0.91
POLR2B-202ENST00000381227 CHMP7Q8WUX9 453 aaPredicted RBP9.34□□□□□ -0.91
POLR2B-202ENST00000381227 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
POLR2B-202ENST00000381227 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
POLR2B-202ENST00000381227 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
POLR2B-202ENST00000381227 ANP32CO43423 234 aa9.33□□□□□ -0.92
POLR2B-202ENST00000381227 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
POLR2B-202ENST00000381227 CUL7Q14999 1698 aa9.31□□□□□ -0.92
POLR2B-202ENST00000381227 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
POLR2B-202ENST00000381227 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
POLR2B-202ENST00000381227 NEFLP07196 543 aa9.3□□□□□ -0.92
POLR2B-202ENST00000381227 CASKIN1Q8WXD9 1431 aa9.3□□□□□ -0.92
POLR2B-202ENST00000381227 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
POLR2B-202ENST00000381227 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
POLR2B-202ENST00000381227 GRIN2AQ12879 1464 aa9.29□□□□□ -0.92
POLR2B-202ENST00000381227 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
POLR2B-202ENST00000381227 ZNF326Q5BKZ1 582 aaKnown RBP9.28□□□□□ -0.92
POLR2B-202ENST00000381227 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
POLR2B-202ENST00000381227 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
POLR2B-202ENST00000381227 CTTNBP2Q8WZ74 1663 aa9.26□□□□□ -0.93
POLR2B-202ENST00000381227 BCANQ96GW7 911 aa9.26□□□□□ -0.93
POLR2B-202ENST00000381227 SYNJ2O15056 1496 aa9.26□□□□□ -0.93
POLR2B-202ENST00000381227 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
POLR2B-202ENST00000381227 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
POLR2B-202ENST00000381227 PPP1R15AO75807 674 aaPredicted RBP9.24□□□□□ -0.93
POLR2B-202ENST00000381227 MAGI1Q96QZ7 1491 aaPredicted RBP9.24□□□□□ -0.93
POLR2B-202ENST00000381227 CHD1O14646 1710 aa9.24□□□□□ -0.93
POLR2B-202ENST00000381227 JPH4Q96JJ6 628 aa9.23□□□□□ -0.93
POLR2B-202ENST00000381227 ERCC6L2Q5T890 1561 aa9.23□□□□□ -0.93
POLR2B-202ENST00000381227 SLC4A1APQ9BWU0 796 aaKnown RBP9.23□□□□□ -0.93
POLR2B-202ENST00000381227 CCDC18Q5T9S5 1454 aa9.23□□□□□ -0.93
POLR2B-202ENST00000381227 FOXD1Q16676 465 aa9.22□□□□□ -0.93
POLR2B-202ENST00000381227 CFDP1Q9UEE9 299 aaPredicted RBP9.22□□□□□ -0.93
POLR2B-202ENST00000381227 NCOA2Q15596 1464 aa9.22□□□□□ -0.93
POLR2B-202ENST00000381227 DISP1Q96F81 1524 aa9.22□□□□□ -0.93
POLR2B-202ENST00000381227 IQGAP2Q13576 1575 aa9.22□□□□□ -0.93
POLR2B-202ENST00000381227 MYOM3Q5VTT5 1437 aa9.22□□□□□ -0.93
POLR2B-202ENST00000381227 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
POLR2B-202ENST00000381227 NUP160Q12769 1436 aa9.2□□□□□ -0.94
POLR2B-202ENST00000381227 LRRIQ1Q96JM4 1722 aa9.2□□□□□ -0.94
POLR2B-202ENST00000381227 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
POLR2B-202ENST00000381227 SAMD9Q5K651 1589 aa9.19□□□□□ -0.94
POLR2B-202ENST00000381227 PLEKHD1A6NEE1 506 aa9.19□□□□□ -0.94
POLR2B-202ENST00000381227 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
POLR2B-202ENST00000381227 MPHOSPH9Q99550 1183 aa9.18□□□□□ -0.94
POLR2B-202ENST00000381227 FKBP8Q14318 412 aa9.17□□□□□ -0.94
POLR2B-202ENST00000381227 PLB1Q6P1J6 1458 aa9.17□□□□□ -0.94
POLR2B-202ENST00000381227 UACAQ9BZF9 1416 aa9.16□□□□□ -0.94
POLR2B-202ENST00000381227 HNRNPUQ00839 825 aaKnown RBP eCLIP9.16□□□□□ -0.94
POLR2B-202ENST00000381227 MAPKBP1O60336 1514 aa9.16□□□□□ -0.94
POLR2B-202ENST00000381227 TSPY4P0CV99 314 aa9.16□□□□□ -0.94
POLR2B-202ENST00000381227 TSPY10P0CW01 314 aa9.16□□□□□ -0.94
POLR2B-202ENST00000381227 ZNF644Q9H582 1327 aaPredicted RBP9.16□□□□□ -0.94
POLR2B-202ENST00000381227 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
POLR2B-202ENST00000381227 PRG4Q92954 1404 aaPredicted RBP9.15□□□□□ -0.94
POLR2B-202ENST00000381227 CDK13Q14004 1512 aaKnown RBP9.15□□□□□ -0.94
POLR2B-202ENST00000381227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms