RNA–Protein interactions for RNA: ENST00000381031.7

TTC38-201, Transcript of tetratricopeptide repeat domain 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC38, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-201ENST00000381031 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
TTC38-201ENST00000381031 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
TTC38-201ENST00000381031 LRRC9Q6ZRR7 1453 aa19.74■□□□□ 0.75
TTC38-201ENST00000381031 MAP3K1Q13233 1512 aa19.71■□□□□ 0.75
TTC38-201ENST00000381031 IGF1RP08069 1367 aa19.71■□□□□ 0.75
TTC38-201ENST00000381031 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
TTC38-201ENST00000381031 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
TTC38-201ENST00000381031 CFTRP13569 1480 aa19.7■□□□□ 0.74
TTC38-201ENST00000381031 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
TTC38-201ENST00000381031 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
TTC38-201ENST00000381031 RBM19Q9Y4C8 960 aaKnown RBP19.64■□□□□ 0.73
TTC38-201ENST00000381031 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
TTC38-201ENST00000381031 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
TTC38-201ENST00000381031 P3H3Q8IVL6 736 aa19.62■□□□□ 0.73
TTC38-201ENST00000381031 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
TTC38-201ENST00000381031 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
TTC38-201ENST00000381031 NEFLP07196 543 aa19.57■□□□□ 0.72
TTC38-201ENST00000381031 ANP32CO43423 234 aa19.57■□□□□ 0.72
TTC38-201ENST00000381031 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
TTC38-201ENST00000381031 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
TTC38-201ENST00000381031 TIMELESSQ9UNS1 1208 aa19.55■□□□□ 0.72
TTC38-201ENST00000381031 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
TTC38-201ENST00000381031 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
TTC38-201ENST00000381031 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
TTC38-201ENST00000381031 FHOD3Q2V2M9 1422 aa19.52■□□□□ 0.72
TTC38-201ENST00000381031 MSH5O43196 834 aa19.5■□□□□ 0.71
TTC38-201ENST00000381031 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
TTC38-201ENST00000381031 PTPRKQ15262 1439 aa19.45■□□□□ 0.7
TTC38-201ENST00000381031 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
TTC38-201ENST00000381031 CCDC18Q5T9S5 1454 aa19.43■□□□□ 0.7
TTC38-201ENST00000381031 FYCO1Q9BQS8 1478 aa19.43■□□□□ 0.7
TTC38-201ENST00000381031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.72e-9■■■□□ 17.4
TTC38-201ENST00000381031 FGD6Q6ZV73 1430 aa19.41■□□□□ 0.7
TTC38-201ENST00000381031 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
TTC38-201ENST00000381031 CASKIN1Q8WXD9 1431 aa19.4■□□□□ 0.7
TTC38-201ENST00000381031 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
TTC38-201ENST00000381031 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.694e-7■■■■■ 32.1
TTC38-201ENST00000381031 HNRNPUQ00839 825 aaKnown RBP eCLIP19.38■□□□□ 0.69
TTC38-201ENST00000381031 PTPN23Q9H3S7 1636 aa19.38■□□□□ 0.69
TTC38-201ENST00000381031 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
TTC38-201ENST00000381031 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
TTC38-201ENST00000381031 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
TTC38-201ENST00000381031 EFCAB5A4FU69 1503 aa19.33■□□□□ 0.68
TTC38-201ENST00000381031 LRRIQ1Q96JM4 1722 aa19.32■□□□□ 0.68
TTC38-201ENST00000381031 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
TTC38-201ENST00000381031 NAIPQ13075 1403 aa19.32■□□□□ 0.68
TTC38-201ENST00000381031 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
TTC38-201ENST00000381031 CCDC184Q52MB2 194 aa19.29■□□□□ 0.68
TTC38-201ENST00000381031 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
TTC38-201ENST00000381031 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
TTC38-201ENST00000381031 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.68
TTC38-201ENST00000381031 HSPA5P11021 654 aaKnown RBP19.27■□□□□ 0.68
TTC38-201ENST00000381031 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
TTC38-201ENST00000381031 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
TTC38-201ENST00000381031 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
TTC38-201ENST00000381031 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
TTC38-201ENST00000381031 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
TTC38-201ENST00000381031 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
TTC38-201ENST00000381031 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
TTC38-201ENST00000381031 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
TTC38-201ENST00000381031 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
TTC38-201ENST00000381031 RRP7BPQ9NSQ0 103 aa19.2■□□□□ 0.66
TTC38-201ENST00000381031 CUL7Q14999 1698 aa19.19■□□□□ 0.66
TTC38-201ENST00000381031 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
TTC38-201ENST00000381031 C11orf95C9JLR9 678 aaPredicted RBP19.18■□□□□ 0.66
TTC38-201ENST00000381031 KDM6BO15054 1643 aa19.18■□□□□ 0.66
TTC38-201ENST00000381031 TOPBP1Q92547 1522 aa19.18■□□□□ 0.66
TTC38-201ENST00000381031 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
TTC38-201ENST00000381031 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
TTC38-201ENST00000381031 CNTLNQ9NXG0 1405 aa19.16■□□□□ 0.66
TTC38-201ENST00000381031 SAMD9Q5K651 1589 aa19.15■□□□□ 0.66
TTC38-201ENST00000381031 MAGI3Q5TCQ9 1506 aa19.15■□□□□ 0.66
TTC38-201ENST00000381031 SUPT6HQ7KZ85 1726 aaKnown RBP19.15■□□□□ 0.66
TTC38-201ENST00000381031 PPP4R2Q9NY27 417 aa19.15■□□□□ 0.66
TTC38-201ENST00000381031 B4GALNT3Q6L9W6 998 aa19.13■□□□□ 0.65
TTC38-201ENST00000381031 FAM9BQ8IZU0 186 aa19.12■□□□□ 0.65
TTC38-201ENST00000381031 HECW1Q76N89 1606 aa19.12■□□□□ 0.65
TTC38-201ENST00000381031 UGGT2Q9NYU1 1516 aa19.12■□□□□ 0.65
TTC38-201ENST00000381031 EIF4G2P78344 907 aaKnown RBP eCLIP19.12■□□□□ 0.655e-8■■■□□ 18.8
TTC38-201ENST00000381031 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
TTC38-201ENST00000381031 FOXD1Q16676 465 aa19.11■□□□□ 0.65
TTC38-201ENST00000381031 GCC2Q8IWJ2 1684 aa19.1■□□□□ 0.65
TTC38-201ENST00000381031 PRKRIP1Q9H875 184 aaPredicted RBP19.1■□□□□ 0.65
TTC38-201ENST00000381031 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
TTC38-201ENST00000381031 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
TTC38-201ENST00000381031 NESP48681 1621 aa19.09■□□□□ 0.65
TTC38-201ENST00000381031 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
TTC38-201ENST00000381031 ERICH6BQ5W0A0 696 aa19.08■□□□□ 0.65
TTC38-201ENST00000381031 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
TTC38-201ENST00000381031 NCOA1Q15788 1441 aa19.08■□□□□ 0.64
TTC38-201ENST00000381031 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
TTC38-201ENST00000381031 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
TTC38-201ENST00000381031 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
TTC38-201ENST00000381031 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
TTC38-201ENST00000381031 ZBED9Q6R2W3 1325 aa19.04■□□□□ 0.64
TTC38-201ENST00000381031 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
TTC38-201ENST00000381031 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
TTC38-201ENST00000381031 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
TTC38-201ENST00000381031 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
TTC38-201ENST00000381031 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms