RNA–Protein interactions for RNA: ENST00000380550.6

OFD1-202, Transcript of OFD1, centriole and centriolar satellite protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene OFD1, Length 3,296 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OFD1-202ENST00000380550 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
OFD1-202ENST00000380550 PKNOX2Q96KN3 472 aa19.16■□□□□ 0.66
OFD1-202ENST00000380550 NOP58Q9Y2X3 529 aaKnown RBP19.16■□□□□ 0.66
OFD1-202ENST00000380550 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
OFD1-202ENST00000380550 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
OFD1-202ENST00000380550 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
OFD1-202ENST00000380550 EEA1Q15075 1411 aa19.07■□□□□ 0.64
OFD1-202ENST00000380550 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
OFD1-202ENST00000380550 B4GALNT3Q6L9W6 998 aa19.07■□□□□ 0.64
OFD1-202ENST00000380550 TOP2BQ02880 1626 aa19.06■□□□□ 0.64
OFD1-202ENST00000380550 CUX1P39880 1505 aa19.04■□□□□ 0.64
OFD1-202ENST00000380550 NESP48681 1621 aa19.03■□□□□ 0.64
OFD1-202ENST00000380550 BRPF3Q9ULD4 1205 aa19.01■□□□□ 0.63
OFD1-202ENST00000380550 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
OFD1-202ENST00000380550 LAS1LQ9Y4W2 734 aaKnown RBP18.98■□□□□ 0.63
OFD1-202ENST00000380550 CUX2O14529 1486 aa18.97■□□□□ 0.63
OFD1-202ENST00000380550 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
OFD1-202ENST00000380550 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
OFD1-202ENST00000380550 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
OFD1-202ENST00000380550 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
OFD1-202ENST00000380550 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
OFD1-202ENST00000380550 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
OFD1-202ENST00000380550 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
OFD1-202ENST00000380550 ZBTB47Q9UFB7 747 aaPredicted RBP18.87■□□□□ 0.61
OFD1-202ENST00000380550 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
OFD1-202ENST00000380550 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
OFD1-202ENST00000380550 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
OFD1-202ENST00000380550 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
OFD1-202ENST00000380550 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
OFD1-202ENST00000380550 NEFMP07197 916 aa18.84■□□□□ 0.61
OFD1-202ENST00000380550 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
OFD1-202ENST00000380550 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
OFD1-202ENST00000380550 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
OFD1-202ENST00000380550 VSIG10Q8N0Z9 540 aa18.82■□□□□ 0.6
OFD1-202ENST00000380550 ANP32CO43423 234 aa18.81■□□□□ 0.6
OFD1-202ENST00000380550 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
OFD1-202ENST00000380550 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
OFD1-202ENST00000380550 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
OFD1-202ENST00000380550 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
OFD1-202ENST00000380550 KIF21BO75037 1637 aa18.78■□□□□ 0.6
OFD1-202ENST00000380550 IPO9Q96P70 1041 aaKnown RBP18.78■□□□□ 0.6
OFD1-202ENST00000380550 ZMYND15Q9H091 742 aa18.76■□□□□ 0.59
OFD1-202ENST00000380550 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
OFD1-202ENST00000380550 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
OFD1-202ENST00000380550 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
OFD1-202ENST00000380550 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
OFD1-202ENST00000380550 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
OFD1-202ENST00000380550 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
OFD1-202ENST00000380550 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
OFD1-202ENST00000380550 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
OFD1-202ENST00000380550 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
OFD1-202ENST00000380550 IGF1RP08069 1367 aa18.68■□□□□ 0.58
OFD1-202ENST00000380550 CLIP1P30622 1438 aa18.68■□□□□ 0.58
OFD1-202ENST00000380550 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
OFD1-202ENST00000380550 WASHC2AQ641Q2 1341 aa18.64■□□□□ 0.58
OFD1-202ENST00000380550 A0A0U1RQG5 324 aaPredicted RBP18.64■□□□□ 0.57
OFD1-202ENST00000380550 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
OFD1-202ENST00000380550 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
OFD1-202ENST00000380550 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
OFD1-202ENST00000380550 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
OFD1-202ENST00000380550 CCER2I3L3R5 266 aa18.6■□□□□ 0.57
OFD1-202ENST00000380550 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
OFD1-202ENST00000380550 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
OFD1-202ENST00000380550 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
OFD1-202ENST00000380550 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
OFD1-202ENST00000380550 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
OFD1-202ENST00000380550 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
OFD1-202ENST00000380550 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
OFD1-202ENST00000380550 MRC2Q9UBG0 1479 aa18.51■□□□□ 0.55
OFD1-202ENST00000380550 GSE1Q14687 1217 aa18.51■□□□□ 0.55
OFD1-202ENST00000380550 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
OFD1-202ENST00000380550 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
OFD1-202ENST00000380550 SLC24A1O60721 1099 aa18.49■□□□□ 0.55
OFD1-202ENST00000380550 RSPH6AQ9H0K4 717 aa18.49■□□□□ 0.55
OFD1-202ENST00000380550 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
OFD1-202ENST00000380550 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
OFD1-202ENST00000380550 GLIPR1L2Q4G1C9 344 aa18.48■□□□□ 0.55
OFD1-202ENST00000380550 ARXQ96QS3 562 aa18.47■□□□□ 0.55
OFD1-202ENST00000380550 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
OFD1-202ENST00000380550 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.54
OFD1-202ENST00000380550 SKAP1Q86WV1 359 aa18.43■□□□□ 0.54
OFD1-202ENST00000380550 WDR62O43379 1518 aa18.42■□□□□ 0.54
OFD1-202ENST00000380550 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
OFD1-202ENST00000380550 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
OFD1-202ENST00000380550 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.543e-7■■■■■ 32.8
OFD1-202ENST00000380550 NFKBIBQ15653 356 aa18.38■□□□□ 0.53
OFD1-202ENST00000380550 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
OFD1-202ENST00000380550 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
OFD1-202ENST00000380550 ABCA5Q8WWZ7 1642 aa18.37■□□□□ 0.53
OFD1-202ENST00000380550 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
OFD1-202ENST00000380550 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
OFD1-202ENST00000380550 RRAGDQ9NQL2 400 aaPredicted RBP18.35■□□□□ 0.53
OFD1-202ENST00000380550 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
OFD1-202ENST00000380550 CUL7Q14999 1698 aa18.35■□□□□ 0.53
OFD1-202ENST00000380550 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
OFD1-202ENST00000380550 HSP90AA2PQ14568 343 aaPredicted RBP18.33■□□□□ 0.52
OFD1-202ENST00000380550 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
OFD1-202ENST00000380550 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
OFD1-202ENST00000380550 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
OFD1-202ENST00000380550 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms