RNA–Protein interactions for RNA: ENST00000380038.7

KLC1-205, Transcript of kinesin light chain 1, human

TSL 2 BASIC

Gene KLC1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-205	ENST00000380038	LRRC9	Q6ZRR7	1453 aa		32.97	■■■□□ 2.87
KLC1-205	ENST00000380038	PHLDB1	Q86UU1	1377 aa		32.91	■■■□□ 2.86
KLC1-205	ENST00000380038	MAPKBP1	O60336	1514 aa		32.9	■■■□□ 2.86
KLC1-205	ENST00000380038	LAMC3	Q9Y6N6	1575 aa		32.9	■■■□□ 2.86
KLC1-205	ENST00000380038	FHAD1	B1AJZ9	1412 aa		32.89	■■■□□ 2.86
KLC1-205	ENST00000380038	SETD5	Q9C0A6	1442 aa		32.86	■■■□□ 2.85
KLC1-205	ENST00000380038	DNMBP	Q6XZF7	1577 aa		32.86	■■■□□ 2.85
KLC1-205	ENST00000380038	TOPBP1	Q92547	1522 aa		32.81	■■■□□ 2.84
KLC1-205	ENST00000380038	P3H3	Q8IVL6	736 aa		32.79	■■■□□ 2.84
KLC1-205	ENST00000380038	PCF11	O94913	1555 aa	Known RBP	32.78	■■■□□ 2.84
KLC1-205	ENST00000380038	CFAP43	Q8NDM7	1665 aa		32.76	■■■□□ 2.84
KLC1-205	ENST00000380038	RAD54L2	Q9Y4B4	1467 aa		32.76	■■■□□ 2.83
KLC1-205	ENST00000380038	ABCA10	Q8WWZ4	1543 aa		32.75	■■■□□ 2.83
KLC1-205	ENST00000380038	FAM50A	Q14320	339 aa	Known RBP	32.74	■■■□□ 2.83
KLC1-205	ENST00000380038	POLA1	P09884	1462 aa	Predicted RBP	32.74	■■■□□ 2.83
KLC1-205	ENST00000380038	FHOD3	Q2V2M9	1422 aa		32.71	■■■□□ 2.83
KLC1-205	ENST00000380038	URB2	Q14146	1524 aa	Known RBP	32.68	■■■□□ 2.82
KLC1-205	ENST00000380038	PDS5B	Q9NTI5	1447 aa		32.67	■■■□□ 2.82
KLC1-205	ENST00000380038	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.67	■■■□□ 2.82
KLC1-205	ENST00000380038	FYCO1	Q9BQS8	1478 aa		32.67	■■■□□ 2.82
KLC1-205	ENST00000380038	EFCAB5	A4FU69	1503 aa		32.65	■■■□□ 2.82
KLC1-205	ENST00000380038	CASKIN1	Q8WXD9	1431 aa		32.64	■■■□□ 2.82
KLC1-205	ENST00000380038	AQR	O60306	1485 aa	Known RBP eCLIP	32.62	■■■□□ 2.81	4e-6	■■■■□ 23.4
KLC1-205	ENST00000380038	SIN3A	Q96ST3	1273 aa		32.62	■■■□□ 2.81
KLC1-205	ENST00000380038	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.59	■■■□□ 2.81
KLC1-205	ENST00000380038	CUL7	Q14999	1698 aa		32.56	■■■□□ 2.8
KLC1-205	ENST00000380038	WDR97	A6NE52	1622 aa		32.56	■■■□□ 2.8
KLC1-205	ENST00000380038	KIF21A	Q7Z4S6	1674 aa		32.55	■■■□□ 2.8
KLC1-205	ENST00000380038	TIMELESS	Q9UNS1	1208 aa		32.53	■■■□□ 2.8
KLC1-205	ENST00000380038	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.52	■■■□□ 2.8
KLC1-205	ENST00000380038	KCNH8	Q96L42	1107 aa		32.48	■■■□□ 2.79
KLC1-205	ENST00000380038	FMN1	Q68DA7	1419 aa		32.48	■■■□□ 2.79
KLC1-205	ENST00000380038	CTTNBP2	Q8WZ74	1663 aa		32.46	■■■□□ 2.79
KLC1-205	ENST00000380038	SNAPC4	Q5SXM2	1469 aa		32.44	■■■□□ 2.78
KLC1-205	ENST00000380038	FGD6	Q6ZV73	1430 aa		32.43	■■■□□ 2.78
KLC1-205	ENST00000380038	DDX10	Q13206	875 aa	Known RBP	32.39	■■■□□ 2.78
KLC1-205	ENST00000380038	PPP1R15A	O75807	674 aa	Predicted RBP	32.39	■■■□□ 2.78
KLC1-205	ENST00000380038	TDRD9	Q8NDG6	1382 aa	Known RBP	32.36	■■■□□ 2.77
KLC1-205	ENST00000380038	MTUS2	Q5JR59	1369 aa		32.34	■■■□□ 2.77
KLC1-205	ENST00000380038	ABCA5	Q8WWZ7	1642 aa		32.31	■■■□□ 2.76
KLC1-205	ENST00000380038	SAMD9	Q5K651	1589 aa		32.31	■■■□□ 2.76
KLC1-205	ENST00000380038	PTPRK	Q15262	1439 aa		32.31	■■■□□ 2.76
KLC1-205	ENST00000380038	HFM1	A2PYH4	1435 aa		32.28	■■■□□ 2.76
KLC1-205	ENST00000380038	GAPVD1	Q14C86	1478 aa		32.27	■■■□□ 2.76
KLC1-205	ENST00000380038	CCDC18	Q5T9S5	1454 aa		32.27	■■■□□ 2.76
KLC1-205	ENST00000380038	MYT1	Q01538	1121 aa		32.26	■■■□□ 2.76
KLC1-205	ENST00000380038	GRIN2B	Q13224	1484 aa		32.25	■■■□□ 2.75
KLC1-205	ENST00000380038	TARBP1	Q13395	1621 aa	Known RBP	32.24	■■■□□ 2.75
KLC1-205	ENST00000380038	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.23	■■■□□ 2.75
KLC1-205	ENST00000380038	UACA	Q9BZF9	1416 aa		32.22	■■■□□ 2.75
KLC1-205	ENST00000380038	NCOA2	Q15596	1464 aa		32.22	■■■□□ 2.75
KLC1-205	ENST00000380038	MRC2	Q9UBG0	1479 aa		32.22	■■■□□ 2.75
KLC1-205	ENST00000380038	MYOM3	Q5VTT5	1437 aa		32.2	■■■□□ 2.75
KLC1-205	ENST00000380038	LRRIQ1	Q96JM4	1722 aa		32.2	■■■□□ 2.74
KLC1-205	ENST00000380038	PTPN23	Q9H3S7	1636 aa		32.19	■■■□□ 2.74
KLC1-205	ENST00000380038	TONSL	Q96HA7	1378 aa		32.18	■■■□□ 2.74
KLC1-205	ENST00000380038	NAIP	Q13075	1403 aa		32.17	■■■□□ 2.74
KLC1-205	ENST00000380038	THOC2	Q8NI27	1593 aa	Known RBP	32.16	■■■□□ 2.74
KLC1-205	ENST00000380038	CCER2	I3L3R5	266 aa		32.11	■■■□□ 2.73
KLC1-205	ENST00000380038	EHBP1L1	Q8N3D4	1523 aa		32.1	■■■□□ 2.73
KLC1-205	ENST00000380038	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.08	■■■□□ 2.73
KLC1-205	ENST00000380038	ARHGEF11	O15085	1522 aa		32.06	■■■□□ 2.72
KLC1-205	ENST00000380038	UGGT2	Q9NYU1	1516 aa		32.06	■■■□□ 2.72
KLC1-205	ENST00000380038	ANP32C	O43423	234 aa		32.05	■■■□□ 2.72
KLC1-205	ENST00000380038	MAGI3	Q5TCQ9	1506 aa		32.03	■■■□□ 2.72
KLC1-205	ENST00000380038	TSHZ2	Q9NRE2	1034 aa		32.01	■■■□□ 2.71
KLC1-205	ENST00000380038	WDR62	O43379	1518 aa		32.01	■■■□□ 2.71
KLC1-205	ENST00000380038	KDM5B	Q9UGL1	1544 aa		31.98	■■■□□ 2.71
KLC1-205	ENST00000380038	PBRM1	Q86U86	1689 aa		31.97	■■■□□ 2.71
KLC1-205	ENST00000380038	TCOF1	Q13428	1488 aa	Known RBP	31.95	■■■□□ 2.71
KLC1-205	ENST00000380038	FKBP8	Q14318	412 aa		31.92	■■■□□ 2.7
KLC1-205	ENST00000380038	IFT140	Q96RY7	1462 aa		31.92	■■■□□ 2.7
KLC1-205	ENST00000380038	RRP7BP	Q9NSQ0	103 aa		31.92	■■■□□ 2.7
KLC1-205	ENST00000380038	ERCC6	Q03468	1493 aa		31.91	■■■□□ 2.7
KLC1-205	ENST00000380038	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.89	■■■□□ 2.7
KLC1-205	ENST00000380038	TRIM52	Q96A61	297 aa		31.89	■■■□□ 2.7
KLC1-205	ENST00000380038	CHIC2	Q9UKJ5	165 aa		31.88	■■■□□ 2.69
KLC1-205	ENST00000380038	DENND4B	O75064	1496 aa	Predicted RBP	31.87	■■■□□ 2.69
KLC1-205	ENST00000380038	BCAN	Q96GW7	911 aa		31.87	■■■□□ 2.69
KLC1-205	ENST00000380038	HECW1	Q76N89	1606 aa		31.87	■■■□□ 2.69
KLC1-205	ENST00000380038	EPRS	P07814	1512 aa	Known RBP	31.86	■■■□□ 2.69
KLC1-205	ENST00000380038	ADAMTS12	P58397	1594 aa		31.85	■■■□□ 2.69
KLC1-205	ENST00000380038	AKNA	Q7Z591	1439 aa		31.84	■■■□□ 2.69
KLC1-205	ENST00000380038	IQGAP2	Q13576	1575 aa		31.83	■■■□□ 2.69
KLC1-205	ENST00000380038	GCC2	Q8IWJ2	1684 aa		31.81	■■■□□ 2.68
KLC1-205	ENST00000380038	MIA2	Q96PC5	1412 aa		31.79	■■■□□ 2.68
KLC1-205	ENST00000380038	CDK13	Q14004	1512 aa	Known RBP	31.77	■■■□□ 2.68
KLC1-205	ENST00000380038	KDM6B	O15054	1643 aa		31.77	■■■□□ 2.68
KLC1-205	ENST00000380038	NEFL	P07196	543 aa		31.73	■■■□□ 2.67
KLC1-205	ENST00000380038	HSPA5	P11021	654 aa	Known RBP	31.72	■■■□□ 2.67
KLC1-205	ENST00000380038	MPHOSPH9	Q99550	1183 aa		31.72	■■■□□ 2.67
KLC1-205	ENST00000380038	WASHC2A	Q641Q2	1341 aa		31.71	■■■□□ 2.67
KLC1-205	ENST00000380038	EIF4G3	O43432	1585 aa	Known RBP	31.69	■■■□□ 2.66
KLC1-205	ENST00000380038	ARID3C	A6NKF2	412 aa		31.67	■■■□□ 2.66
KLC1-205	ENST00000380038	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.63	■■■□□ 2.65	3e-6	■■■■□ 19.3
KLC1-205	ENST00000380038	L3MBTL2	Q969R5	705 aa		31.63	■■■□□ 2.65
KLC1-205	ENST00000380038	FOXD1	Q16676	465 aa		31.6	■■■□□ 2.65
KLC1-205	ENST00000380038	ROCK1	Q13464	1354 aa		31.59	■■■□□ 2.65
KLC1-205	ENST00000380038	DAPK1	P53355	1430 aa		31.57	■■■□□ 2.65
KLC1-205	ENST00000380038	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.54	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms