RNA–Protein interactions for RNA: ENST00000380035.2

SKOR1-202, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-202ENST00000380035 CCNB3Q8WWL7 1395 aa25.48■■□□□ 1.67
SKOR1-202ENST00000380035 CHIC2Q9UKJ5 165 aa25.47■■□□□ 1.67
SKOR1-202ENST00000380035 SIN3AQ96ST3 1273 aa25.45■■□□□ 1.66
SKOR1-202ENST00000380035 ARHGAP35Q9NRY4 1499 aa25.44■■□□□ 1.66
SKOR1-202ENST00000380035 BIVM-ERCC5R4GMW8 1640 aa25.38■■□□□ 1.65
SKOR1-202ENST00000380035 TRIM52Q96A61 297 aa25.38■■□□□ 1.65
SKOR1-202ENST00000380035 SUPT16HQ9Y5B9 1047 aaKnown RBP25.38■■□□□ 1.65
SKOR1-202ENST00000380035 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
SKOR1-202ENST00000380035 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
SKOR1-202ENST00000380035 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
SKOR1-202ENST00000380035 RRP7BPQ9NSQ0 103 aa25.29■■□□□ 1.64
SKOR1-202ENST00000380035 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
SKOR1-202ENST00000380035 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
SKOR1-202ENST00000380035 RAB3GAP2Q9H2M9 1393 aa25.27■■□□□ 1.64
SKOR1-202ENST00000380035 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
SKOR1-202ENST00000380035 DDX10Q13206 875 aaKnown RBP25.23■■□□□ 1.63
SKOR1-202ENST00000380035 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
SKOR1-202ENST00000380035 PHLDB1Q86UU1 1377 aa25.23■■□□□ 1.63
SKOR1-202ENST00000380035 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
SKOR1-202ENST00000380035 ZNF777Q9ULD5 760 aaPredicted RBP25.21■■□□□ 1.63
SKOR1-202ENST00000380035 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
SKOR1-202ENST00000380035 FKBP8Q14318 412 aa25.18■■□□□ 1.62
SKOR1-202ENST00000380035 TSHZ2Q9NRE2 1034 aa25.17■■□□□ 1.62
SKOR1-202ENST00000380035 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.61
SKOR1-202ENST00000380035 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
SKOR1-202ENST00000380035 ANP32EQ9BTT0 268 aa25.1■■□□□ 1.61
SKOR1-202ENST00000380035 NEFLP07196 543 aa25.09■■□□□ 1.61
SKOR1-202ENST00000380035 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
SKOR1-202ENST00000380035 POLR3GLQ9BT43 218 aa25.09■■□□□ 1.61
SKOR1-202ENST00000380035 SETD5Q9C0A6 1442 aa25.08■■□□□ 1.6
SKOR1-202ENST00000380035 LRRC9Q6ZRR7 1453 aa25.05■■□□□ 1.6
SKOR1-202ENST00000380035 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
SKOR1-202ENST00000380035 BCL11AQ9H165 835 aa25.04■■□□□ 1.6
SKOR1-202ENST00000380035 RRBP1Q9P2E9 1410 aaKnown RBP25.03■■□□□ 1.6
SKOR1-202ENST00000380035 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
SKOR1-202ENST00000380035 FOXD1Q16676 465 aa25.01■■□□□ 1.59
SKOR1-202ENST00000380035 ZNF326Q5BKZ1 582 aaKnown RBP25.01■■□□□ 1.59
SKOR1-202ENST00000380035 TONSLQ96HA7 1378 aa25■■□□□ 1.59
SKOR1-202ENST00000380035 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
SKOR1-202ENST00000380035 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
SKOR1-202ENST00000380035 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
SKOR1-202ENST00000380035 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
SKOR1-202ENST00000380035 ERICH6Q7L0X2 663 aa24.96■■□□□ 1.59
SKOR1-202ENST00000380035 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
SKOR1-202ENST00000380035 IRX6P78412 446 aaPredicted RBP24.91■■□□□ 1.58
SKOR1-202ENST00000380035 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.57
SKOR1-202ENST00000380035 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
SKOR1-202ENST00000380035 CASKIN1Q8WXD9 1431 aa24.82■■□□□ 1.56
SKOR1-202ENST00000380035 ZNF644Q9H582 1327 aaPredicted RBP24.81■■□□□ 1.56
SKOR1-202ENST00000380035 ANP32CO43423 234 aa24.81■■□□□ 1.56
SKOR1-202ENST00000380035 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
SKOR1-202ENST00000380035 FGD6Q6ZV73 1430 aa24.77■■□□□ 1.56
SKOR1-202ENST00000380035 CFDP1Q9UEE9 299 aaPredicted RBP24.76■■□□□ 1.55
SKOR1-202ENST00000380035 SLC4A1APQ9BWU0 796 aaKnown RBP24.75■■□□□ 1.55
SKOR1-202ENST00000380035 PPP1R15AO75807 674 aaPredicted RBP24.75■■□□□ 1.55
SKOR1-202ENST00000380035 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
SKOR1-202ENST00000380035 FYCO1Q9BQS8 1478 aa24.72■■□□□ 1.55
SKOR1-202ENST00000380035 RBM19Q9Y4C8 960 aaKnown RBP24.72■■□□□ 1.55
SKOR1-202ENST00000380035 NCOA2Q15596 1464 aa24.71■■□□□ 1.55
SKOR1-202ENST00000380035 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
SKOR1-202ENST00000380035 MYT1LQ9UL68 1186 aa24.68■■□□□ 1.54
SKOR1-202ENST00000380035 SENP3-EIF4A1A0A087X0R7 540 aa24.68■■□□□ 1.54
SKOR1-202ENST00000380035 JPH4Q96JJ6 628 aa24.66■■□□□ 1.54
SKOR1-202ENST00000380035 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.54
SKOR1-202ENST00000380035 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
SKOR1-202ENST00000380035 PLEKHD1A6NEE1 506 aa24.64■■□□□ 1.53
SKOR1-202ENST00000380035 MPHOSPH9Q99550 1183 aa24.63■■□□□ 1.53
SKOR1-202ENST00000380035 CDK13Q14004 1512 aaKnown RBP24.62■■□□□ 1.53
SKOR1-202ENST00000380035 MYOM3Q5VTT5 1437 aa24.62■■□□□ 1.53
SKOR1-202ENST00000380035 KDM2AQ9Y2K7 1162 aa24.62■■□□□ 1.53
SKOR1-202ENST00000380035 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
SKOR1-202ENST00000380035 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
SKOR1-202ENST00000380035 PTPRKQ15262 1439 aa24.61■■□□□ 1.53
SKOR1-202ENST00000380035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.61■■□□□ 1.53
SKOR1-202ENST00000380035 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
SKOR1-202ENST00000380035 CUL7Q14999 1698 aa24.58■■□□□ 1.53
SKOR1-202ENST00000380035 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
SKOR1-202ENST00000380035 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
SKOR1-202ENST00000380035 SNAPC4Q5SXM2 1469 aa24.54■■□□□ 1.52
SKOR1-202ENST00000380035 MAPKBP1O60336 1514 aa24.54■■□□□ 1.52
SKOR1-202ENST00000380035 HNRNPUQ00839 825 aaKnown RBP eCLIP24.54■■□□□ 1.52
SKOR1-202ENST00000380035 HSPA5P11021 654 aaKnown RBP24.53■■□□□ 1.52
SKOR1-202ENST00000380035 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
SKOR1-202ENST00000380035 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
SKOR1-202ENST00000380035 EIF4G2P78344 907 aaKnown RBP eCLIP24.51■■□□□ 1.51
SKOR1-202ENST00000380035 MAP3K1Q13233 1512 aa24.5■■□□□ 1.51
SKOR1-202ENST00000380035 FAM9BQ8IZU0 186 aa24.5■■□□□ 1.51
SKOR1-202ENST00000380035 HNRNPMP52272 730 aaKnown RBP eCLIP24.47■■□□□ 1.51
SKOR1-202ENST00000380035 NAIPQ13075 1403 aa24.45■■□□□ 1.5
SKOR1-202ENST00000380035 RGL3Q3MIN7 710 aa24.45■■□□□ 1.5
SKOR1-202ENST00000380035 PRG4Q92954 1404 aaPredicted RBP24.45■■□□□ 1.5
SKOR1-202ENST00000380035 TIMELESSQ9UNS1 1208 aa24.45■■□□□ 1.5
SKOR1-202ENST00000380035 EPRSP07814 1512 aaKnown RBP24.44■■□□□ 1.5
SKOR1-202ENST00000380035 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
SKOR1-202ENST00000380035 PKD2Q13563 968 aa24.42■■□□□ 1.5
SKOR1-202ENST00000380035 NBR1Q14596 966 aa24.42■■□□□ 1.5
SKOR1-202ENST00000380035 IQGAP2Q13576 1575 aa24.42■■□□□ 1.5
SKOR1-202ENST00000380035 UACAQ9BZF9 1416 aa24.42■■□□□ 1.5
SKOR1-202ENST00000380035 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
SKOR1-202ENST00000380035 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms