RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
TFAP2A-202ENST00000379608 SIN3AQ96ST3 1273 aa30.29■■■□□ 2.44
TFAP2A-202ENST00000379608 LRRC9Q6ZRR7 1453 aa30.23■■■□□ 2.43
TFAP2A-202ENST00000379608 SUPT16HQ9Y5B9 1047 aaKnown RBP30.19■■■□□ 2.42
TFAP2A-202ENST00000379608 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
TFAP2A-202ENST00000379608 SETD5Q9C0A6 1442 aa30.17■■■□□ 2.42
TFAP2A-202ENST00000379608 HIRIP3Q9BW71 556 aaPredicted RBP30.16■■■□□ 2.42
TFAP2A-202ENST00000379608 RAD54L2Q9Y4B4 1467 aa30.16■■■□□ 2.42
TFAP2A-202ENST00000379608 FHOD3Q2V2M9 1422 aa30.15■■■□□ 2.42
TFAP2A-202ENST00000379608 PCF11O94913 1555 aaKnown RBP30.14■■■□□ 2.42
TFAP2A-202ENST00000379608 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
TFAP2A-202ENST00000379608 DDX10Q13206 875 aaKnown RBP30.09■■■□□ 2.41
TFAP2A-202ENST00000379608 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
TFAP2A-202ENST00000379608 MAP3K1Q13233 1512 aa30.06■■■□□ 2.4
TFAP2A-202ENST00000379608 FHAD1B1AJZ9 1412 aa30■■■□□ 2.39
TFAP2A-202ENST00000379608 NESP48681 1621 aa30■■■□□ 2.39
TFAP2A-202ENST00000379608 CFAP43Q8NDM7 1665 aa29.97■■■□□ 2.39
TFAP2A-202ENST00000379608 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
TFAP2A-202ENST00000379608 DNMBPQ6XZF7 1577 aa29.91■■■□□ 2.38
TFAP2A-202ENST00000379608 BCANQ96GW7 911 aa29.89■■■□□ 2.38
TFAP2A-202ENST00000379608 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
TFAP2A-202ENST00000379608 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
TFAP2A-202ENST00000379608 PPP1R15AO75807 674 aaPredicted RBP29.83■■■□□ 2.37
TFAP2A-202ENST00000379608 FYCO1Q9BQS8 1478 aa29.82■■■□□ 2.36
TFAP2A-202ENST00000379608 CASKIN1Q8WXD9 1431 aa29.82■■■□□ 2.36
TFAP2A-202ENST00000379608 PTPRKQ15262 1439 aa29.79■■■□□ 2.36
TFAP2A-202ENST00000379608 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
TFAP2A-202ENST00000379608 TSHZ2Q9NRE2 1034 aa29.76■■■□□ 2.36
TFAP2A-202ENST00000379608 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
TFAP2A-202ENST00000379608 TRIM52Q96A61 297 aa29.73■■■□□ 2.35
TFAP2A-202ENST00000379608 MTUS2Q5JR59 1369 aa29.72■■■□□ 2.35
TFAP2A-202ENST00000379608 CUL7Q14999 1698 aa29.71■■■□□ 2.35
TFAP2A-202ENST00000379608 EFCAB5A4FU69 1503 aa29.71■■■□□ 2.35
TFAP2A-202ENST00000379608 CTTNBP2Q8WZ74 1663 aa29.71■■■□□ 2.35
TFAP2A-202ENST00000379608 SNAPC4Q5SXM2 1469 aa29.7■■■□□ 2.35
TFAP2A-202ENST00000379608 FKBP8Q14318 412 aa29.69■■■□□ 2.34
TFAP2A-202ENST00000379608 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
TFAP2A-202ENST00000379608 CCDC18Q5T9S5 1454 aa29.67■■■□□ 2.34
TFAP2A-202ENST00000379608 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
TFAP2A-202ENST00000379608 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.34
TFAP2A-202ENST00000379608 LRRIQ1Q96JM4 1722 aa29.65■■■□□ 2.34
TFAP2A-202ENST00000379608 TONSLQ96HA7 1378 aa29.64■■■□□ 2.34
TFAP2A-202ENST00000379608 FMN1Q68DA7 1419 aa29.63■■■□□ 2.33
TFAP2A-202ENST00000379608 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
TFAP2A-202ENST00000379608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.6■■■□□ 2.33
TFAP2A-202ENST00000379608 CHIC2Q9UKJ5 165 aa29.59■■■□□ 2.33
TFAP2A-202ENST00000379608 TIMELESSQ9UNS1 1208 aa29.59■■■□□ 2.33
TFAP2A-202ENST00000379608 ARID3CA6NKF2 412 aa29.59■■■□□ 2.33
TFAP2A-202ENST00000379608 NCOA2Q15596 1464 aa29.58■■■□□ 2.33
TFAP2A-202ENST00000379608 ANP32CO43423 234 aa29.57■■■□□ 2.32
TFAP2A-202ENST00000379608 RRP7BPQ9NSQ0 103 aa29.57■■■□□ 2.32
TFAP2A-202ENST00000379608 PTPN23Q9H3S7 1636 aa29.55■■■□□ 2.32
TFAP2A-202ENST00000379608 MYT1Q01538 1121 aa29.55■■■□□ 2.32
TFAP2A-202ENST00000379608 HFM1A2PYH4 1435 aa29.55■■■□□ 2.32
TFAP2A-202ENST00000379608 NAIPQ13075 1403 aa29.54■■■□□ 2.32
TFAP2A-202ENST00000379608 UACAQ9BZF9 1416 aa29.51■■■□□ 2.32
TFAP2A-202ENST00000379608 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
TFAP2A-202ENST00000379608 GAPVD1Q14C86 1478 aa29.5■■■□□ 2.31
TFAP2A-202ENST00000379608 MYOM3Q5VTT5 1437 aa29.5■■■□□ 2.31
TFAP2A-202ENST00000379608 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
TFAP2A-202ENST00000379608 SAMD9Q5K651 1589 aa29.48■■■□□ 2.31
TFAP2A-202ENST00000379608 MAGI3Q5TCQ9 1506 aa29.48■■■□□ 2.31
TFAP2A-202ENST00000379608 CCER2I3L3R5 266 aa29.44■■■□□ 2.3
TFAP2A-202ENST00000379608 KDM5BQ9UGL1 1544 aa29.41■■■□□ 2.3
TFAP2A-202ENST00000379608 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
TFAP2A-202ENST00000379608 FOXD1Q16676 465 aa29.4■■■□□ 2.3
TFAP2A-202ENST00000379608 SUPT6HQ7KZ85 1726 aaKnown RBP29.37■■■□□ 2.29
TFAP2A-202ENST00000379608 PDS5BQ9NTI5 1447 aa29.35■■■□□ 2.29
TFAP2A-202ENST00000379608 KDM6BO15054 1643 aa29.35■■■□□ 2.29
TFAP2A-202ENST00000379608 DENND4BO75064 1496 aaPredicted RBP29.35■■■□□ 2.29
TFAP2A-202ENST00000379608 UGGT2Q9NYU1 1516 aa29.33■■■□□ 2.29
TFAP2A-202ENST00000379608 HSPA5P11021 654 aaKnown RBP29.32■■■□□ 2.28
TFAP2A-202ENST00000379608 EHBP1L1Q8N3D4 1523 aa29.32■■■□□ 2.28
TFAP2A-202ENST00000379608 NEFLP07196 543 aa29.32■■■□□ 2.28
TFAP2A-202ENST00000379608 WASHC2AQ641Q2 1341 aa29.3■■■□□ 2.28
TFAP2A-202ENST00000379608 IRX6P78412 446 aaPredicted RBP29.29■■■□□ 2.28
TFAP2A-202ENST00000379608 CDK13Q14004 1512 aaKnown RBP29.28■■■□□ 2.28
TFAP2A-202ENST00000379608 TARBP1Q13395 1621 aaKnown RBP29.27■■■□□ 2.28
TFAP2A-202ENST00000379608 HNRNPUQ00839 825 aaKnown RBP eCLIP29.27■■■□□ 2.28
TFAP2A-202ENST00000379608 CCDC184Q52MB2 194 aa29.25■■■□□ 2.27
TFAP2A-202ENST00000379608 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
TFAP2A-202ENST00000379608 C11orf95C9JLR9 678 aaPredicted RBP29.21■■■□□ 2.27
TFAP2A-202ENST00000379608 MPHOSPH9Q99550 1183 aa29.2■■■□□ 2.27
TFAP2A-202ENST00000379608 THOC2Q8NI27 1593 aaKnown RBP29.2■■■□□ 2.27
TFAP2A-202ENST00000379608 L3MBTL2Q969R5 705 aa29.19■■■□□ 2.26
TFAP2A-202ENST00000379608 PBRM1Q86U86 1689 aa29.19■■■□□ 2.26
TFAP2A-202ENST00000379608 EPRSP07814 1512 aaKnown RBP29.18■■■□□ 2.26
TFAP2A-202ENST00000379608 ZNF644Q9H582 1327 aaPredicted RBP29.15■■■□□ 2.26
TFAP2A-202ENST00000379608 RBM19Q9Y4C8 960 aaKnown RBP29.15■■■□□ 2.26
TFAP2A-202ENST00000379608 TCOF1Q13428 1488 aaKnown RBP29.14■■■□□ 2.26
TFAP2A-202ENST00000379608 ANP32EQ9BTT0 268 aa29.13■■■□□ 2.25
TFAP2A-202ENST00000379608 EIF4G2P78344 907 aaKnown RBP eCLIP29.11■■■□□ 2.25
TFAP2A-202ENST00000379608 GCC2Q8IWJ2 1684 aa29.11■■■□□ 2.25
TFAP2A-202ENST00000379608 HECW1Q76N89 1606 aa29.1■■■□□ 2.25
TFAP2A-202ENST00000379608 NBPF8Q3BBV2 869 aa29.09■■■□□ 2.25
TFAP2A-202ENST00000379608 IQGAP2Q13576 1575 aa29.09■■■□□ 2.25
TFAP2A-202ENST00000379608 CNGB1Q14028 1251 aaPredicted RBP29.05■■■□□ 2.24
TFAP2A-202ENST00000379608 ADAMTS12P58397 1594 aa29.03■■■□□ 2.24
TFAP2A-202ENST00000379608 WDR62O43379 1518 aa29.03■■■□□ 2.24
TFAP2A-202ENST00000379608 FAM9BQ8IZU0 186 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms