RNA–Protein interactions for RNA: ENST00000378763.1

FRG2-201, Transcript of FSHD region gene 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FRG2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG2-201ENST00000378763 ABCA5Q8WWZ7 1642 aa13.4□□□□□ -0.26
FRG2-201ENST00000378763 WDR62O43379 1518 aa13.39□□□□□ -0.27
FRG2-201ENST00000378763 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
FRG2-201ENST00000378763 CUL7Q14999 1698 aa13.39□□□□□ -0.27
FRG2-201ENST00000378763 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
FRG2-201ENST00000378763 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
FRG2-201ENST00000378763 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
FRG2-201ENST00000378763 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
FRG2-201ENST00000378763 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.27
FRG2-201ENST00000378763 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
FRG2-201ENST00000378763 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
FRG2-201ENST00000378763 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
FRG2-201ENST00000378763 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
FRG2-201ENST00000378763 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.28
FRG2-201ENST00000378763 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
FRG2-201ENST00000378763 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
FRG2-201ENST00000378763 ARHGAP35Q9NRY4 1499 aa13.25□□□□□ -0.29
FRG2-201ENST00000378763 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
FRG2-201ENST00000378763 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
FRG2-201ENST00000378763 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
FRG2-201ENST00000378763 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
FRG2-201ENST00000378763 TTBK1Q5TCY1 1321 aaPredicted RBP13.22□□□□□ -0.29
FRG2-201ENST00000378763 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.3
FRG2-201ENST00000378763 APLP2Q06481 763 aa13.2□□□□□ -0.3
FRG2-201ENST00000378763 EFCAB5A4FU69 1503 aa13.17□□□□□ -0.3
FRG2-201ENST00000378763 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
FRG2-201ENST00000378763 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
FRG2-201ENST00000378763 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
FRG2-201ENST00000378763 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
FRG2-201ENST00000378763 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
FRG2-201ENST00000378763 IQGAP2Q13576 1575 aa13.1□□□□□ -0.31
FRG2-201ENST00000378763 PCF11O94913 1555 aaKnown RBP13.08□□□□□ -0.32
FRG2-201ENST00000378763 GRIN2AQ12879 1464 aa13.08□□□□□ -0.32
FRG2-201ENST00000378763 HRCP23327 699 aa13.08□□□□□ -0.32
FRG2-201ENST00000378763 SYNJ2O15056 1496 aa13.06□□□□□ -0.32
FRG2-201ENST00000378763 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
FRG2-201ENST00000378763 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
FRG2-201ENST00000378763 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
FRG2-201ENST00000378763 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
FRG2-201ENST00000378763 MAP3K1Q13233 1512 aa13.04□□□□□ -0.32
FRG2-201ENST00000378763 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
FRG2-201ENST00000378763 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
FRG2-201ENST00000378763 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
FRG2-201ENST00000378763 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.32
FRG2-201ENST00000378763 FBLN2P98095 1184 aa13.02□□□□□ -0.33
FRG2-201ENST00000378763 ATP1B4Q9UN42 357 aaPredicted RBP13.02□□□□□ -0.33
FRG2-201ENST00000378763 UGGT2Q9NYU1 1516 aa13.01□□□□□ -0.33
FRG2-201ENST00000378763 CEP170Q5SW79 1584 aa13.01□□□□□ -0.33
FRG2-201ENST00000378763 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
FRG2-201ENST00000378763 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
FRG2-201ENST00000378763 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
FRG2-201ENST00000378763 KIAA0556O60303 1618 aa12.96□□□□□ -0.33
FRG2-201ENST00000378763 NUP160Q12769 1436 aa12.96□□□□□ -0.33
FRG2-201ENST00000378763 CHD1O14646 1710 aa12.95□□□□□ -0.34
FRG2-201ENST00000378763 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
FRG2-201ENST00000378763 HECW1Q76N89 1606 aa12.92□□□□□ -0.34
FRG2-201ENST00000378763 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
FRG2-201ENST00000378763 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
FRG2-201ENST00000378763 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
FRG2-201ENST00000378763 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
FRG2-201ENST00000378763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
FRG2-201ENST00000378763 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
FRG2-201ENST00000378763 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
FRG2-201ENST00000378763 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
FRG2-201ENST00000378763 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
FRG2-201ENST00000378763 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
FRG2-201ENST00000378763 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
FRG2-201ENST00000378763 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
FRG2-201ENST00000378763 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
FRG2-201ENST00000378763 RAPGEF6Q8TEU7 1601 aa12.86□□□□□ -0.35
FRG2-201ENST00000378763 PHLDB1Q86UU1 1377 aa12.86□□□□□ -0.35
FRG2-201ENST00000378763 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
FRG2-201ENST00000378763 EPRSP07814 1512 aaKnown RBP12.85□□□□□ -0.35
FRG2-201ENST00000378763 EHBP1L1Q8N3D4 1523 aa12.85□□□□□ -0.35
FRG2-201ENST00000378763 SUPT6HQ7KZ85 1726 aaKnown RBP12.84□□□□□ -0.35
FRG2-201ENST00000378763 ARHGEF11O15085 1522 aa12.84□□□□□ -0.35
FRG2-201ENST00000378763 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
FRG2-201ENST00000378763 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
FRG2-201ENST00000378763 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
FRG2-201ENST00000378763 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
FRG2-201ENST00000378763 NCOA2Q15596 1464 aa12.8□□□□□ -0.36
FRG2-201ENST00000378763 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
FRG2-201ENST00000378763 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
FRG2-201ENST00000378763 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
FRG2-201ENST00000378763 ITGAEP38570 1179 aa12.79□□□□□ -0.36
FRG2-201ENST00000378763 FAM50AQ14320 339 aaKnown RBP12.78□□□□□ -0.36
FRG2-201ENST00000378763 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
FRG2-201ENST00000378763 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
FRG2-201ENST00000378763 CYB5RLQ6IPT4 315 aa12.76□□□□□ -0.37
FRG2-201ENST00000378763 ABCA8O94911 1581 aa12.76□□□□□ -0.37
FRG2-201ENST00000378763 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
FRG2-201ENST00000378763 CLASP1Q7Z460 1538 aa12.75□□□□□ -0.37
FRG2-201ENST00000378763 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
FRG2-201ENST00000378763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
FRG2-201ENST00000378763 PTPRGP23470 1445 aa12.73□□□□□ -0.37
FRG2-201ENST00000378763 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
FRG2-201ENST00000378763 PTPN23Q9H3S7 1636 aa12.72□□□□□ -0.37
FRG2-201ENST00000378763 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.37
FRG2-201ENST00000378763 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
FRG2-201ENST00000378763 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms