RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 RAB3GAP2Q9H2M9 1393 aa21.98■■□□□ 1.11
DFFB-204ENST00000378206 FHOD3Q2V2M9 1422 aa21.95■■□□□ 1.1
DFFB-204ENST00000378206 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
DFFB-204ENST00000378206 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
DFFB-204ENST00000378206 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
DFFB-204ENST00000378206 KCNH8Q96L42 1107 aa21.88■■□□□ 1.09
DFFB-204ENST00000378206 LRRC9Q6ZRR7 1453 aa21.87■■□□□ 1.09
DFFB-204ENST00000378206 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
DFFB-204ENST00000378206 PELP1Q8IZL8 1130 aaKnown RBP21.85■■□□□ 1.09
DFFB-204ENST00000378206 TIAM1Q13009 1591 aa21.85■■□□□ 1.09
DFFB-204ENST00000378206 TOPBP1Q92547 1522 aa21.83■■□□□ 1.08
DFFB-204ENST00000378206 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
DFFB-204ENST00000378206 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
DFFB-204ENST00000378206 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
DFFB-204ENST00000378206 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.07
DFFB-204ENST00000378206 MAPKBP1O60336 1514 aa21.76■■□□□ 1.07
DFFB-204ENST00000378206 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
DFFB-204ENST00000378206 PCF11O94913 1555 aaKnown RBP21.75■■□□□ 1.07
DFFB-204ENST00000378206 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
DFFB-204ENST00000378206 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
DFFB-204ENST00000378206 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.07
DFFB-204ENST00000378206 MAP3K1Q13233 1512 aa21.66■■□□□ 1.06
DFFB-204ENST00000378206 MTUS2Q5JR59 1369 aa21.65■■□□□ 1.06
DFFB-204ENST00000378206 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
DFFB-204ENST00000378206 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
DFFB-204ENST00000378206 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
DFFB-204ENST00000378206 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
DFFB-204ENST00000378206 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
DFFB-204ENST00000378206 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
DFFB-204ENST00000378206 PPP1R15AO75807 674 aaPredicted RBP21.57■■□□□ 1.04
DFFB-204ENST00000378206 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
DFFB-204ENST00000378206 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
DFFB-204ENST00000378206 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
DFFB-204ENST00000378206 SUPT16HQ9Y5B9 1047 aaKnown RBP21.53■■□□□ 1.04
DFFB-204ENST00000378206 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.038e-7■■■■■ 28.7
DFFB-204ENST00000378206 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
DFFB-204ENST00000378206 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
DFFB-204ENST00000378206 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
DFFB-204ENST00000378206 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
DFFB-204ENST00000378206 FOXD1Q16676 465 aa21.45■■□□□ 1.02
DFFB-204ENST00000378206 TRIM52Q96A61 297 aa21.45■■□□□ 1.02
DFFB-204ENST00000378206 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
DFFB-204ENST00000378206 CUL7Q14999 1698 aa21.45■■□□□ 1.02
DFFB-204ENST00000378206 BCANQ96GW7 911 aa21.45■■□□□ 1.02
DFFB-204ENST00000378206 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
DFFB-204ENST00000378206 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
DFFB-204ENST00000378206 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
DFFB-204ENST00000378206 CTTNBP2Q8WZ74 1663 aa21.42■■□□□ 1.02
DFFB-204ENST00000378206 NAIPQ13075 1403 aa21.38■■□□□ 1.01
DFFB-204ENST00000378206 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
DFFB-204ENST00000378206 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
DFFB-204ENST00000378206 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
DFFB-204ENST00000378206 MAGI3Q5TCQ9 1506 aa21.37■■□□□ 1.01
DFFB-204ENST00000378206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.36■■□□□ 1.01
DFFB-204ENST00000378206 LRRIQ1Q96JM4 1722 aa21.36■■□□□ 1.01
DFFB-204ENST00000378206 KIF21AQ7Z4S6 1674 aa21.36■■□□□ 1.01
DFFB-204ENST00000378206 TIMELESSQ9UNS1 1208 aa21.35■■□□□ 1.01
DFFB-204ENST00000378206 HFM1A2PYH4 1435 aa21.35■■□□□ 1.01
DFFB-204ENST00000378206 ZNF644Q9H582 1327 aaPredicted RBP21.34■■□□□ 1.01
DFFB-204ENST00000378206 ANP32CO43423 234 aa21.32■■□□□ 1
DFFB-204ENST00000378206 UACAQ9BZF9 1416 aa21.31■■□□□ 1
DFFB-204ENST00000378206 SAMD9Q5K651 1589 aa21.31■■□□□ 1
DFFB-204ENST00000378206 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
DFFB-204ENST00000378206 FBLN2P98095 1184 aa21.29■■□□□ 1
DFFB-204ENST00000378206 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
DFFB-204ENST00000378206 FKBP8Q14318 412 aa21.28■■□□□ 1
DFFB-204ENST00000378206 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
DFFB-204ENST00000378206 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
DFFB-204ENST00000378206 MPHOSPH9Q99550 1183 aa21.24■□□□□ 0.99
DFFB-204ENST00000378206 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
DFFB-204ENST00000378206 EPRSP07814 1512 aaKnown RBP21.21■□□□□ 0.99
DFFB-204ENST00000378206 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
DFFB-204ENST00000378206 UGGT2Q9NYU1 1516 aa21.2■□□□□ 0.98
DFFB-204ENST00000378206 KDM6BO15054 1643 aa21.19■□□□□ 0.98
DFFB-204ENST00000378206 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
DFFB-204ENST00000378206 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
DFFB-204ENST00000378206 SUPT6HQ7KZ85 1726 aaKnown RBP21.19■□□□□ 0.98
DFFB-204ENST00000378206 DENND4BO75064 1496 aaPredicted RBP21.18■□□□□ 0.98
DFFB-204ENST00000378206 EHBP1L1Q8N3D4 1523 aa21.18■□□□□ 0.98
DFFB-204ENST00000378206 C11orf95C9JLR9 678 aaPredicted RBP21.17■□□□□ 0.98
DFFB-204ENST00000378206 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
DFFB-204ENST00000378206 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
DFFB-204ENST00000378206 TSHZ2Q9NRE2 1034 aa21.15■□□□□ 0.98
DFFB-204ENST00000378206 IQGAP2Q13576 1575 aa21.15■□□□□ 0.98
DFFB-204ENST00000378206 CCDC184Q52MB2 194 aa21.13■□□□□ 0.97
DFFB-204ENST00000378206 CCER2I3L3R5 266 aa21.13■□□□□ 0.97
DFFB-204ENST00000378206 ARHGEF11O15085 1522 aa21.12■□□□□ 0.97
DFFB-204ENST00000378206 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
DFFB-204ENST00000378206 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
DFFB-204ENST00000378206 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
DFFB-204ENST00000378206 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
DFFB-204ENST00000378206 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
DFFB-204ENST00000378206 IRX6P78412 446 aaPredicted RBP21.09■□□□□ 0.97
DFFB-204ENST00000378206 HNRNPUQ00839 825 aaKnown RBP eCLIP21.09■□□□□ 0.97
DFFB-204ENST00000378206 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.97
DFFB-204ENST00000378206 PBRM1Q86U86 1689 aa21.07■□□□□ 0.96
DFFB-204ENST00000378206 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
DFFB-204ENST00000378206 ZNF326Q5BKZ1 582 aaKnown RBP21.06■□□□□ 0.96
DFFB-204ENST00000378206 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
DFFB-204ENST00000378206 CFDP1Q9UEE9 299 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms