RNA–Protein interactions for RNA: ENST00000378166.8

CASK-204, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CASK, Length 3,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-204ENST00000378166 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
CASK-204ENST00000378166 CUX1P39880 1505 aa12.1□□□□□ -0.47
CASK-204ENST00000378166 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
CASK-204ENST00000378166 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
CASK-204ENST00000378166 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
CASK-204ENST00000378166 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
CASK-204ENST00000378166 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
CASK-204ENST00000378166 PRXQ9BXM0 1461 aa12.01□□□□□ -0.49
CASK-204ENST00000378166 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
CASK-204ENST00000378166 CLIP1P30622 1438 aa12□□□□□ -0.49
CASK-204ENST00000378166 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
CASK-204ENST00000378166 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
CASK-204ENST00000378166 NESP48681 1621 aa11.94□□□□□ -0.5
CASK-204ENST00000378166 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
CASK-204ENST00000378166 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
CASK-204ENST00000378166 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
CASK-204ENST00000378166 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
CASK-204ENST00000378166 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
CASK-204ENST00000378166 CUX2O14529 1486 aa11.86□□□□□ -0.51
CASK-204ENST00000378166 IGF1RP08069 1367 aa11.86□□□□□ -0.51
CASK-204ENST00000378166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
CASK-204ENST00000378166 NBR1Q14596 966 aa11.86□□□□□ -0.51
CASK-204ENST00000378166 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
CASK-204ENST00000378166 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
CASK-204ENST00000378166 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
CASK-204ENST00000378166 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
CASK-204ENST00000378166 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
CASK-204ENST00000378166 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
CASK-204ENST00000378166 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
CASK-204ENST00000378166 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
CASK-204ENST00000378166 POLA1P09884 1462 aaPredicted RBP11.78□□□□□ -0.52
CASK-204ENST00000378166 CARMIL1Q5VZK9 1371 aa11.78□□□□□ -0.52
CASK-204ENST00000378166 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.52
CASK-204ENST00000378166 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
CASK-204ENST00000378166 WDR97A6NE52 1622 aa11.75□□□□□ -0.53
CASK-204ENST00000378166 PKD2Q13563 968 aa11.75□□□□□ -0.53
CASK-204ENST00000378166 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
CASK-204ENST00000378166 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
CASK-204ENST00000378166 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
CASK-204ENST00000378166 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
CASK-204ENST00000378166 CUL7Q14999 1698 aa11.71□□□□□ -0.53
CASK-204ENST00000378166 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
CASK-204ENST00000378166 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
CASK-204ENST00000378166 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
CASK-204ENST00000378166 ABCA5Q8WWZ7 1642 aa11.68□□□□□ -0.54
CASK-204ENST00000378166 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
CASK-204ENST00000378166 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
CASK-204ENST00000378166 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
CASK-204ENST00000378166 CTTNBP2Q8WZ74 1663 aa11.66□□□□□ -0.54
CASK-204ENST00000378166 TIAM1Q13009 1591 aa11.65□□□□□ -0.54
CASK-204ENST00000378166 TARBP1Q13395 1621 aaKnown RBP11.63□□□□□ -0.55
CASK-204ENST00000378166 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
CASK-204ENST00000378166 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
CASK-204ENST00000378166 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
CASK-204ENST00000378166 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
CASK-204ENST00000378166 PCF11O94913 1555 aaKnown RBP11.61□□□□□ -0.55
CASK-204ENST00000378166 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
CASK-204ENST00000378166 LRRC9Q6ZRR7 1453 aa11.59□□□□□ -0.55
CASK-204ENST00000378166 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
CASK-204ENST00000378166 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.56
CASK-204ENST00000378166 FHOD3Q2V2M9 1422 aa11.56□□□□□ -0.56
CASK-204ENST00000378166 FYCO1Q9BQS8 1478 aa11.56□□□□□ -0.56
CASK-204ENST00000378166 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
CASK-204ENST00000378166 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
CASK-204ENST00000378166 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
CASK-204ENST00000378166 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
CASK-204ENST00000378166 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
CASK-204ENST00000378166 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
CASK-204ENST00000378166 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
CASK-204ENST00000378166 IFNLR1Q8IU57 520 aaPredicted RBP11.54□□□□□ -0.56
CASK-204ENST00000378166 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
CASK-204ENST00000378166 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
CASK-204ENST00000378166 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
CASK-204ENST00000378166 CLSPNQ9HAW4 1339 aa11.53□□□□□ -0.56
CASK-204ENST00000378166 SNAPC4Q5SXM2 1469 aa11.53□□□□□ -0.56
CASK-204ENST00000378166 IGSF3O75054 1194 aa11.52□□□□□ -0.57
CASK-204ENST00000378166 PHLDB1Q86UU1 1377 aa11.52□□□□□ -0.57
CASK-204ENST00000378166 FMN1Q68DA7 1419 aa11.51□□□□□ -0.57
CASK-204ENST00000378166 LRRIQ1Q96JM4 1722 aa11.51□□□□□ -0.57
CASK-204ENST00000378166 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
CASK-204ENST00000378166 CCDC9Q9Y3X0 531 aaKnown RBP11.5□□□□□ -0.57
CASK-204ENST00000378166 WDR62O43379 1518 aa11.49□□□□□ -0.57
CASK-204ENST00000378166 ZNF316A6NFI3 1004 aaPredicted RBP11.49□□□□□ -0.57
CASK-204ENST00000378166 DIEXFQ68CQ4 756 aaKnown RBP11.49□□□□□ -0.57
CASK-204ENST00000378166 ADAMTS12P58397 1594 aa11.49□□□□□ -0.57
CASK-204ENST00000378166 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
CASK-204ENST00000378166 ARID3AQ99856 593 aa11.47□□□□□ -0.57
CASK-204ENST00000378166 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
CASK-204ENST00000378166 GRIN2BQ13224 1484 aa11.47□□□□□ -0.57
CASK-204ENST00000378166 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.58
CASK-204ENST00000378166 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
CASK-204ENST00000378166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.45□□□□□ -0.58
CASK-204ENST00000378166 FOXD1Q16676 465 aa11.44□□□□□ -0.58
CASK-204ENST00000378166 RAB3GAP2Q9H2M9 1393 aa11.43□□□□□ -0.58
CASK-204ENST00000378166 IQGAP2Q13576 1575 aa11.43□□□□□ -0.58
CASK-204ENST00000378166 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
CASK-204ENST00000378166 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
CASK-204ENST00000378166 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
CASK-204ENST00000378166 ITGAEP38570 1179 aa11.41□□□□□ -0.58
CASK-204ENST00000378166 MAPKBP1O60336 1514 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms