RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
ARHGEF1-204ENST00000378152 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
ARHGEF1-204ENST00000378152 WDR62O43379 1518 aa23.4■■□□□ 1.34
ARHGEF1-204ENST00000378152 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
ARHGEF1-204ENST00000378152 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
ARHGEF1-204ENST00000378152 CUL7Q14999 1698 aa23.38■■□□□ 1.33
ARHGEF1-204ENST00000378152 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
ARHGEF1-204ENST00000378152 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
ARHGEF1-204ENST00000378152 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
ARHGEF1-204ENST00000378152 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
ARHGEF1-204ENST00000378152 ITGAEP38570 1179 aa23.25■■□□□ 1.31
ARHGEF1-204ENST00000378152 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
ARHGEF1-204ENST00000378152 SUPT16HQ9Y5B9 1047 aaKnown RBP23.21■■□□□ 1.31
ARHGEF1-204ENST00000378152 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
ARHGEF1-204ENST00000378152 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
ARHGEF1-204ENST00000378152 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
ARHGEF1-204ENST00000378152 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
ARHGEF1-204ENST00000378152 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
ARHGEF1-204ENST00000378152 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
ARHGEF1-204ENST00000378152 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
ARHGEF1-204ENST00000378152 ADAMTS12P58397 1594 aa23.08■■□□□ 1.29
ARHGEF1-204ENST00000378152 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
ARHGEF1-204ENST00000378152 KCNH8Q96L42 1107 aa23.07■■□□□ 1.28
ARHGEF1-204ENST00000378152 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
ARHGEF1-204ENST00000378152 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
ARHGEF1-204ENST00000378152 EFCAB5A4FU69 1503 aa23.01■■□□□ 1.27
ARHGEF1-204ENST00000378152 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
ARHGEF1-204ENST00000378152 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
ARHGEF1-204ENST00000378152 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
ARHGEF1-204ENST00000378152 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.271e-6■■■■■ 36
ARHGEF1-204ENST00000378152 TSHZ2Q9NRE2 1034 aa22.94■■□□□ 1.26
ARHGEF1-204ENST00000378152 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
ARHGEF1-204ENST00000378152 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
ARHGEF1-204ENST00000378152 BCANQ96GW7 911 aa22.89■■□□□ 1.26
ARHGEF1-204ENST00000378152 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.26
ARHGEF1-204ENST00000378152 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
ARHGEF1-204ENST00000378152 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
ARHGEF1-204ENST00000378152 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
ARHGEF1-204ENST00000378152 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
ARHGEF1-204ENST00000378152 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
ARHGEF1-204ENST00000378152 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
ARHGEF1-204ENST00000378152 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
ARHGEF1-204ENST00000378152 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.24
ARHGEF1-204ENST00000378152 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
ARHGEF1-204ENST00000378152 HIRIP3Q9BW71 556 aaPredicted RBP22.81■■□□□ 1.24
ARHGEF1-204ENST00000378152 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
ARHGEF1-204ENST00000378152 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
ARHGEF1-204ENST00000378152 CFAP43Q8NDM7 1665 aa22.78■■□□□ 1.24
ARHGEF1-204ENST00000378152 FKBP8Q14318 412 aa22.78■■□□□ 1.24
ARHGEF1-204ENST00000378152 LRRC9Q6ZRR7 1453 aa22.78■■□□□ 1.24
ARHGEF1-204ENST00000378152 PCF11O94913 1555 aaKnown RBP22.77■■□□□ 1.24
ARHGEF1-204ENST00000378152 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
ARHGEF1-204ENST00000378152 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
ARHGEF1-204ENST00000378152 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
ARHGEF1-204ENST00000378152 UGGT2Q9NYU1 1516 aa22.75■■□□□ 1.23
ARHGEF1-204ENST00000378152 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
ARHGEF1-204ENST00000378152 CASKIN1Q8WXD9 1431 aa22.72■■□□□ 1.23
ARHGEF1-204ENST00000378152 KIAA0586Q9BVV6 1533 aa22.71■■□□□ 1.23
ARHGEF1-204ENST00000378152 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
ARHGEF1-204ENST00000378152 PPP1R15AO75807 674 aaPredicted RBP22.69■■□□□ 1.22
ARHGEF1-204ENST00000378152 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
ARHGEF1-204ENST00000378152 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
ARHGEF1-204ENST00000378152 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
ARHGEF1-204ENST00000378152 NUP160Q12769 1436 aa22.64■■□□□ 1.21
ARHGEF1-204ENST00000378152 ANP32CO43423 234 aa22.6■■□□□ 1.21
ARHGEF1-204ENST00000378152 NEFLP07196 543 aa22.6■■□□□ 1.21
ARHGEF1-204ENST00000378152 LRRIQ1Q96JM4 1722 aa22.6■■□□□ 1.21
ARHGEF1-204ENST00000378152 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
ARHGEF1-204ENST00000378152 BCL11AQ9H165 835 aa22.59■■□□□ 1.21
ARHGEF1-204ENST00000378152 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
ARHGEF1-204ENST00000378152 TIMELESSQ9UNS1 1208 aa22.56■■□□□ 1.2
ARHGEF1-204ENST00000378152 CCER2I3L3R5 266 aa22.53■■□□□ 1.2
ARHGEF1-204ENST00000378152 HECW1Q76N89 1606 aa22.52■■□□□ 1.2
ARHGEF1-204ENST00000378152 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
ARHGEF1-204ENST00000378152 CHD1O14646 1710 aa22.49■■□□□ 1.19
ARHGEF1-204ENST00000378152 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
ARHGEF1-204ENST00000378152 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
ARHGEF1-204ENST00000378152 RBM19Q9Y4C8 960 aaKnown RBP22.47■■□□□ 1.19
ARHGEF1-204ENST00000378152 FGD6Q6ZV73 1430 aa22.41■■□□□ 1.18
ARHGEF1-204ENST00000378152 EHBP1L1Q8N3D4 1523 aa22.41■■□□□ 1.18
ARHGEF1-204ENST00000378152 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
ARHGEF1-204ENST00000378152 RAPGEF6Q8TEU7 1601 aa22.39■■□□□ 1.18
ARHGEF1-204ENST00000378152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.174e-7■□□□□ 8.1
ARHGEF1-204ENST00000378152 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
ARHGEF1-204ENST00000378152 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
ARHGEF1-204ENST00000378152 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
ARHGEF1-204ENST00000378152 ARHGEF11O15085 1522 aa22.37■■□□□ 1.17
ARHGEF1-204ENST00000378152 SUPT6HQ7KZ85 1726 aaKnown RBP22.35■■□□□ 1.17
ARHGEF1-204ENST00000378152 CARMIL2Q6F5E8 1435 aa22.34■■□□□ 1.17
ARHGEF1-204ENST00000378152 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
ARHGEF1-204ENST00000378152 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
ARHGEF1-204ENST00000378152 UACAQ9BZF9 1416 aa22.33■■□□□ 1.17
ARHGEF1-204ENST00000378152 MAGI3Q5TCQ9 1506 aa22.33■■□□□ 1.16
ARHGEF1-204ENST00000378152 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
ARHGEF1-204ENST00000378152 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
ARHGEF1-204ENST00000378152 NUP153P49790 1475 aaKnown RBP22.3■■□□□ 1.16
ARHGEF1-204ENST00000378152 FBLN2P98095 1184 aa22.29■■□□□ 1.16
ARHGEF1-204ENST00000378152 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
ARHGEF1-204ENST00000378152 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
ARHGEF1-204ENST00000378152 ABCA8O94911 1581 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms