RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 PRXQ9BXM0 1461 aa29.74■■■□□ 2.35
SHB-201ENST00000377707 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
SHB-201ENST00000377707 IGF1RP08069 1367 aa29.69■■■□□ 2.34
SHB-201ENST00000377707 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
SHB-201ENST00000377707 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
SHB-201ENST00000377707 DHX57Q6P158 1386 aaKnown RBP29.61■■■□□ 2.33
SHB-201ENST00000377707 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
SHB-201ENST00000377707 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
SHB-201ENST00000377707 CARMIL1Q5VZK9 1371 aa29.53■■■□□ 2.32
SHB-201ENST00000377707 ARHGAP35Q9NRY4 1499 aa29.49■■■□□ 2.31
SHB-201ENST00000377707 P3H3Q8IVL6 736 aa29.48■■■□□ 2.31
SHB-201ENST00000377707 AQRO60306 1485 aaKnown RBP eCLIP29.46■■■□□ 2.313e-6■■■■□ 24.7
SHB-201ENST00000377707 WDR62O43379 1518 aa29.43■■■□□ 2.3
SHB-201ENST00000377707 ATP1B4Q9UN42 357 aaPredicted RBP29.43■■■□□ 2.3
SHB-201ENST00000377707 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
SHB-201ENST00000377707 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
SHB-201ENST00000377707 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.29
SHB-201ENST00000377707 CCNB3Q8WWL7 1395 aa29.38■■■□□ 2.29
SHB-201ENST00000377707 WDR97A6NE52 1622 aa29.36■■■□□ 2.29
SHB-201ENST00000377707 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
SHB-201ENST00000377707 RRBP1Q9P2E9 1410 aaKnown RBP29.36■■■□□ 2.29
SHB-201ENST00000377707 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
SHB-201ENST00000377707 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
SHB-201ENST00000377707 FAM50AQ14320 339 aaKnown RBP29.26■■■□□ 2.27
SHB-201ENST00000377707 CLSPNQ9HAW4 1339 aa29.26■■■□□ 2.27
SHB-201ENST00000377707 RAB3GAP2Q9H2M9 1393 aa29.23■■■□□ 2.27
SHB-201ENST00000377707 KCNH8Q96L42 1107 aa29.17■■■□□ 2.26
SHB-201ENST00000377707 SIN3AQ96ST3 1273 aa29.17■■■□□ 2.26
SHB-201ENST00000377707 PHLDB1Q86UU1 1377 aa29.15■■■□□ 2.26
SHB-201ENST00000377707 CUL7Q14999 1698 aa29.12■■■□□ 2.25
SHB-201ENST00000377707 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
SHB-201ENST00000377707 HIRIP3Q9BW71 556 aaPredicted RBP29.09■■■□□ 2.25
SHB-201ENST00000377707 TIAM1Q13009 1591 aa29.09■■■□□ 2.25
SHB-201ENST00000377707 FBLN2P98095 1184 aa29.08■■■□□ 2.25
SHB-201ENST00000377707 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
SHB-201ENST00000377707 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
SHB-201ENST00000377707 FHOD3Q2V2M9 1422 aa29.05■■■□□ 2.24
SHB-201ENST00000377707 LRRC9Q6ZRR7 1453 aa29.04■■■□□ 2.24
SHB-201ENST00000377707 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
SHB-201ENST00000377707 MAPKBP1O60336 1514 aa29.03■■■□□ 2.24
SHB-201ENST00000377707 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
SHB-201ENST00000377707 SETD5Q9C0A6 1442 aa28.98■■■□□ 2.23
SHB-201ENST00000377707 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
SHB-201ENST00000377707 DDX10Q13206 875 aaKnown RBP28.95■■■□□ 2.23
SHB-201ENST00000377707 CHMP7Q8WUX9 453 aaPredicted RBP28.95■■■□□ 2.23
SHB-201ENST00000377707 PCF11O94913 1555 aaKnown RBP28.95■■■□□ 2.22
SHB-201ENST00000377707 ANP32EQ9BTT0 268 aa28.9■■■□□ 2.22
SHB-201ENST00000377707 SUPT16HQ9Y5B9 1047 aaKnown RBP28.9■■■□□ 2.22
SHB-201ENST00000377707 CTTNBP2Q8WZ74 1663 aa28.82■■■□□ 2.2
SHB-201ENST00000377707 MAP3K1Q13233 1512 aa28.8■■■□□ 2.2
SHB-201ENST00000377707 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
SHB-201ENST00000377707 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
SHB-201ENST00000377707 SYNJ2O15056 1496 aa28.75■■■□□ 2.19
SHB-201ENST00000377707 BCANQ96GW7 911 aa28.73■■■□□ 2.19
SHB-201ENST00000377707 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
SHB-201ENST00000377707 ARID3CA6NKF2 412 aa28.67■■■□□ 2.18
SHB-201ENST00000377707 IQGAP2Q13576 1575 aa28.67■■■□□ 2.18
SHB-201ENST00000377707 CASKIN1Q8WXD9 1431 aa28.66■■■□□ 2.18
SHB-201ENST00000377707 MTUS2Q5JR59 1369 aa28.65■■■□□ 2.18
SHB-201ENST00000377707 EFCAB5A4FU69 1503 aa28.65■■■□□ 2.18
SHB-201ENST00000377707 PPP1R15AO75807 674 aaPredicted RBP28.64■■■□□ 2.18
SHB-201ENST00000377707 FYCO1Q9BQS8 1478 aa28.64■■■□□ 2.18
SHB-201ENST00000377707 PTPRKQ15262 1439 aa28.64■■■□□ 2.17
SHB-201ENST00000377707 KIAA0586Q9BVV6 1533 aa28.63■■■□□ 2.17
SHB-201ENST00000377707 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
SHB-201ENST00000377707 TRIM52Q96A61 297 aa28.6■■■□□ 2.17
SHB-201ENST00000377707 CHIC2Q9UKJ5 165 aa28.6■■■□□ 2.17
SHB-201ENST00000377707 FGD6Q6ZV73 1430 aa28.6■■■□□ 2.17
SHB-201ENST00000377707 SAMD9Q5K651 1589 aa28.58■■■□□ 2.17
SHB-201ENST00000377707 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
SHB-201ENST00000377707 SLC24A1O60721 1099 aa28.56■■■□□ 2.16
SHB-201ENST00000377707 RRP7BPQ9NSQ0 103 aa28.54■■■□□ 2.16
SHB-201ENST00000377707 FMN1Q68DA7 1419 aa28.53■■■□□ 2.16
SHB-201ENST00000377707 NUP160Q12769 1436 aa28.53■■■□□ 2.16
SHB-201ENST00000377707 TONSLQ96HA7 1378 aa28.52■■■□□ 2.16
SHB-201ENST00000377707 CCDC18Q5T9S5 1454 aa28.5■■■□□ 2.15
SHB-201ENST00000377707 FKBP8Q14318 412 aa28.49■■■□□ 2.15
SHB-201ENST00000377707 DISP1Q96F81 1524 aa28.48■■■□□ 2.15
SHB-201ENST00000377707 UGGT2Q9NYU1 1516 aa28.48■■■□□ 2.15
SHB-201ENST00000377707 LRRIQ1Q96JM4 1722 aa28.47■■■□□ 2.15
SHB-201ENST00000377707 TSHZ2Q9NRE2 1034 aa28.45■■■□□ 2.14
SHB-201ENST00000377707 NCOA2Q15596 1464 aa28.44■■■□□ 2.14
SHB-201ENST00000377707 ANP32CO43423 234 aa28.43■■■□□ 2.14
SHB-201ENST00000377707 CHD1O14646 1710 aa28.41■■■□□ 2.14
SHB-201ENST00000377707 TIMELESSQ9UNS1 1208 aa28.39■■■□□ 2.14
SHB-201ENST00000377707 NAIPQ13075 1403 aa28.38■■■□□ 2.13
SHB-201ENST00000377707 FOXD1Q16676 465 aa28.38■■■□□ 2.13
SHB-201ENST00000377707 KIAA0556O60303 1618 aa28.37■■■□□ 2.13
SHB-201ENST00000377707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.37■■■□□ 2.13
SHB-201ENST00000377707 HFM1A2PYH4 1435 aa28.37■■■□□ 2.13
SHB-201ENST00000377707 MYOM3Q5VTT5 1437 aa28.36■■■□□ 2.13
SHB-201ENST00000377707 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
SHB-201ENST00000377707 UACAQ9BZF9 1416 aa28.34■■■□□ 2.13
SHB-201ENST00000377707 MAGI3Q5TCQ9 1506 aa28.33■■■□□ 2.13
SHB-201ENST00000377707 PRG4Q92954 1404 aaPredicted RBP28.31■■■□□ 2.12
SHB-201ENST00000377707 CARMIL2Q6F5E8 1435 aa28.29■■■□□ 2.12
SHB-201ENST00000377707 PLB1Q6P1J6 1458 aa28.26■■■□□ 2.11
SHB-201ENST00000377707 CDK13Q14004 1512 aaKnown RBP28.25■■■□□ 2.11
SHB-201ENST00000377707 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
SHB-201ENST00000377707 CCER2I3L3R5 266 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms