RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
SF1-205ENST00000377394 ITGAEP38570 1179 aa20.06■□□□□ 0.8
SF1-205ENST00000377394 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
SF1-205ENST00000377394 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
SF1-205ENST00000377394 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
SF1-205ENST00000377394 PHLDB1Q86UU1 1377 aa20.02■□□□□ 0.8
SF1-205ENST00000377394 MAPKBP1O60336 1514 aa20.01■□□□□ 0.79
SF1-205ENST00000377394 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
SF1-205ENST00000377394 CFAP43Q8NDM7 1665 aa19.99■□□□□ 0.79
SF1-205ENST00000377394 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
SF1-205ENST00000377394 PCF11O94913 1555 aaKnown RBP19.99■□□□□ 0.79
SF1-205ENST00000377394 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
SF1-205ENST00000377394 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
SF1-205ENST00000377394 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
SF1-205ENST00000377394 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
SF1-205ENST00000377394 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
SF1-205ENST00000377394 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
SF1-205ENST00000377394 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
SF1-205ENST00000377394 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
SF1-205ENST00000377394 NESP48681 1621 aa19.89■□□□□ 0.77
SF1-205ENST00000377394 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
SF1-205ENST00000377394 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
SF1-205ENST00000377394 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.771e-7■■■■■ 49.1
SF1-205ENST00000377394 CUL7Q14999 1698 aa19.88■□□□□ 0.77
SF1-205ENST00000377394 ATP1B4Q9UN42 357 aaPredicted RBP19.84■□□□□ 0.77
SF1-205ENST00000377394 CTTNBP2Q8WZ74 1663 aa19.84■□□□□ 0.77
SF1-205ENST00000377394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
SF1-205ENST00000377394 BCANQ96GW7 911 aa19.82■□□□□ 0.76
SF1-205ENST00000377394 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
SF1-205ENST00000377394 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
SF1-205ENST00000377394 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
SF1-205ENST00000377394 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
SF1-205ENST00000377394 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
SF1-205ENST00000377394 TIMELESSQ9UNS1 1208 aa19.75■□□□□ 0.75
SF1-205ENST00000377394 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
SF1-205ENST00000377394 FGD6Q6ZV73 1430 aa19.74■□□□□ 0.75
SF1-205ENST00000377394 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
SF1-205ENST00000377394 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
SF1-205ENST00000377394 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
SF1-205ENST00000377394 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
SF1-205ENST00000377394 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
SF1-205ENST00000377394 PPP1R15AO75807 674 aaPredicted RBP19.67■□□□□ 0.74
SF1-205ENST00000377394 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
SF1-205ENST00000377394 PTPRKQ15262 1439 aa19.67■□□□□ 0.74
SF1-205ENST00000377394 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
SF1-205ENST00000377394 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
SF1-205ENST00000377394 DDX10Q13206 875 aaKnown RBP19.64■□□□□ 0.73
SF1-205ENST00000377394 HFM1A2PYH4 1435 aa19.64■□□□□ 0.73
SF1-205ENST00000377394 RBM19Q9Y4C8 960 aaKnown RBP19.64■□□□□ 0.73
SF1-205ENST00000377394 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
SF1-205ENST00000377394 FKBP8Q14318 412 aa19.62■□□□□ 0.73
SF1-205ENST00000377394 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
SF1-205ENST00000377394 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
SF1-205ENST00000377394 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
SF1-205ENST00000377394 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
SF1-205ENST00000377394 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
SF1-205ENST00000377394 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
SF1-205ENST00000377394 NAIPQ13075 1403 aa19.57■□□□□ 0.72
SF1-205ENST00000377394 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
SF1-205ENST00000377394 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
SF1-205ENST00000377394 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
SF1-205ENST00000377394 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
SF1-205ENST00000377394 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
SF1-205ENST00000377394 HIRIP3Q9BW71 556 aaPredicted RBP19.54■□□□□ 0.72
SF1-205ENST00000377394 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
SF1-205ENST00000377394 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
SF1-205ENST00000377394 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
SF1-205ENST00000377394 MSH5O43196 834 aa19.54■□□□□ 0.72
SF1-205ENST00000377394 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
SF1-205ENST00000377394 MAGI3Q5TCQ9 1506 aa19.53■□□□□ 0.72
SF1-205ENST00000377394 CCER2I3L3R5 266 aa19.48■□□□□ 0.71
SF1-205ENST00000377394 TCOF1Q13428 1488 aaKnown RBP19.47■□□□□ 0.71
SF1-205ENST00000377394 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
SF1-205ENST00000377394 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
SF1-205ENST00000377394 HECW1Q76N89 1606 aa19.44■□□□□ 0.7
SF1-205ENST00000377394 ANP32CO43423 234 aa19.43■□□□□ 0.7
SF1-205ENST00000377394 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
SF1-205ENST00000377394 EPRSP07814 1512 aaKnown RBP19.42■□□□□ 0.7
SF1-205ENST00000377394 DENND4BO75064 1496 aaPredicted RBP19.41■□□□□ 0.7
SF1-205ENST00000377394 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
SF1-205ENST00000377394 GCC2Q8IWJ2 1684 aa19.4■□□□□ 0.7
SF1-205ENST00000377394 RRP7BPQ9NSQ0 103 aa19.4■□□□□ 0.7
SF1-205ENST00000377394 AKNAQ7Z591 1439 aa19.39■□□□□ 0.69
SF1-205ENST00000377394 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
SF1-205ENST00000377394 WDR62O43379 1518 aa19.37■□□□□ 0.69
SF1-205ENST00000377394 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
SF1-205ENST00000377394 MIA2Q96PC5 1412 aa19.36■□□□□ 0.69
SF1-205ENST00000377394 KDM6BO15054 1643 aa19.36■□□□□ 0.69
SF1-205ENST00000377394 NEFLP07196 543 aa19.35■□□□□ 0.69
SF1-205ENST00000377394 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
SF1-205ENST00000377394 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
SF1-205ENST00000377394 MPHOSPH9Q99550 1183 aa19.28■□□□□ 0.68
SF1-205ENST00000377394 HSPA5P11021 654 aaKnown RBP19.26■□□□□ 0.67
SF1-205ENST00000377394 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
SF1-205ENST00000377394 WASHC2AQ641Q2 1341 aa19.26■□□□□ 0.67
SF1-205ENST00000377394 ERICH6Q7L0X2 663 aa19.25■□□□□ 0.67
SF1-205ENST00000377394 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
SF1-205ENST00000377394 DISP1Q96F81 1524 aa19.24■□□□□ 0.67
SF1-205ENST00000377394 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
SF1-205ENST00000377394 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms