RNA–Protein interactions for RNA: ENST00000376573.8

PIP4K2A-202, Transcript of phosphatidylinositol-5-phosphate 4-kinase type 2 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIP4K2A, Length 3,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIP4K2A-202ENST00000376573 SENP3-EIF4A1A0A087X0R7 540 aa26.49■■□□□ 1.83
PIP4K2A-202ENST00000376573 RAB3GAP2Q9H2M9 1393 aa26.49■■□□□ 1.83
PIP4K2A-202ENST00000376573 ARAP1Q96P48 1450 aa26.48■■□□□ 1.83
PIP4K2A-202ENST00000376573 KCNH8Q96L42 1107 aa26.47■■□□□ 1.83
PIP4K2A-202ENST00000376573 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
PIP4K2A-202ENST00000376573 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
PIP4K2A-202ENST00000376573 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
PIP4K2A-202ENST00000376573 MYT1LQ9UL68 1186 aa26.42■■□□□ 1.82
PIP4K2A-202ENST00000376573 CUX1P39880 1505 aa26.39■■□□□ 1.82
PIP4K2A-202ENST00000376573 FOXD1Q16676 465 aa26.38■■□□□ 1.81
PIP4K2A-202ENST00000376573 FKBP8Q14318 412 aa26.37■■□□□ 1.81
PIP4K2A-202ENST00000376573 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
PIP4K2A-202ENST00000376573 NESP48681 1621 aa26.34■■□□□ 1.81
PIP4K2A-202ENST00000376573 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
PIP4K2A-202ENST00000376573 IRX6P78412 446 aaPredicted RBP26.3■■□□□ 1.8
PIP4K2A-202ENST00000376573 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
PIP4K2A-202ENST00000376573 PRXQ9BXM0 1461 aa26.29■■□□□ 1.8
PIP4K2A-202ENST00000376573 CFTRP13569 1480 aa26.28■■□□□ 1.8
PIP4K2A-202ENST00000376573 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
PIP4K2A-202ENST00000376573 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
PIP4K2A-202ENST00000376573 HNRNPUQ00839 825 aaKnown RBP eCLIP26.26■■□□□ 1.79
PIP4K2A-202ENST00000376573 SETD5Q9C0A6 1442 aa26.26■■□□□ 1.79
PIP4K2A-202ENST00000376573 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
PIP4K2A-202ENST00000376573 FAM9BQ8IZU0 186 aa26.24■■□□□ 1.79
PIP4K2A-202ENST00000376573 PHLDB1Q86UU1 1377 aa26.24■■□□□ 1.79
PIP4K2A-202ENST00000376573 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
PIP4K2A-202ENST00000376573 SLC4A1APQ9BWU0 796 aaKnown RBP26.17■■□□□ 1.78
PIP4K2A-202ENST00000376573 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
PIP4K2A-202ENST00000376573 CDK11AQ9UQ88 783 aaPredicted RBP26.17■■□□□ 1.78
PIP4K2A-202ENST00000376573 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
PIP4K2A-202ENST00000376573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.11■■□□□ 1.77
PIP4K2A-202ENST00000376573 SALL2Q9Y467 1007 aaPredicted RBP26.07■■□□□ 1.76
PIP4K2A-202ENST00000376573 SUPT16HQ9Y5B9 1047 aaKnown RBP26.07■■□□□ 1.76
PIP4K2A-202ENST00000376573 ERICH6Q7L0X2 663 aa26.07■■□□□ 1.76
PIP4K2A-202ENST00000376573 CFDP1Q9UEE9 299 aaPredicted RBP26.03■■□□□ 1.76
PIP4K2A-202ENST00000376573 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
PIP4K2A-202ENST00000376573 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
PIP4K2A-202ENST00000376573 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
PIP4K2A-202ENST00000376573 HMGXB3Q12766 1538 aa26■■□□□ 1.75
PIP4K2A-202ENST00000376573 EIF4G2P78344 907 aaKnown RBP eCLIP25.99■■□□□ 1.751e-17■■■■■ 38.2
PIP4K2A-202ENST00000376573 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
PIP4K2A-202ENST00000376573 MRS2Q9HD23 443 aa25.96■■□□□ 1.75
PIP4K2A-202ENST00000376573 LRRC9Q6ZRR7 1453 aa25.96■■□□□ 1.75
PIP4K2A-202ENST00000376573 RGL3Q3MIN7 710 aa25.95■■□□□ 1.74
PIP4K2A-202ENST00000376573 FMN1Q68DA7 1419 aa25.94■■□□□ 1.74
PIP4K2A-202ENST00000376573 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.741e-6■■■■□ 23.3
PIP4K2A-202ENST00000376573 ZNF644Q9H582 1327 aaPredicted RBP25.92■■□□□ 1.74
PIP4K2A-202ENST00000376573 RRBP1Q9P2E9 1410 aaKnown RBP25.91■■□□□ 1.74
PIP4K2A-202ENST00000376573 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
PIP4K2A-202ENST00000376573 HSPA5P11021 654 aaKnown RBP25.9■■□□□ 1.74
PIP4K2A-202ENST00000376573 ERCC6Q03468 1493 aa25.88■■□□□ 1.73
PIP4K2A-202ENST00000376573 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
PIP4K2A-202ENST00000376573 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
PIP4K2A-202ENST00000376573 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
PIP4K2A-202ENST00000376573 PLEKHD1A6NEE1 506 aa25.86■■□□□ 1.73
PIP4K2A-202ENST00000376573 MPHOSPH9Q99550 1183 aa25.86■■□□□ 1.73
PIP4K2A-202ENST00000376573 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
PIP4K2A-202ENST00000376573 L3MBTL2Q969R5 705 aa25.84■■□□□ 1.73
PIP4K2A-202ENST00000376573 TOPBP1Q92547 1522 aa25.83■■□□□ 1.73
PIP4K2A-202ENST00000376573 FGD6Q6ZV73 1430 aa25.76■■□□□ 1.71
PIP4K2A-202ENST00000376573 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
PIP4K2A-202ENST00000376573 CCDC18Q5T9S5 1454 aa25.73■■□□□ 1.71
PIP4K2A-202ENST00000376573 TIAM1Q13009 1591 aa25.71■■□□□ 1.71
PIP4K2A-202ENST00000376573 PKD2Q13563 968 aa25.71■■□□□ 1.71
PIP4K2A-202ENST00000376573 TMC1Q8TDI8 760 aa25.67■■□□□ 1.7
PIP4K2A-202ENST00000376573 TIMELESSQ9UNS1 1208 aa25.66■■□□□ 1.7
PIP4K2A-202ENST00000376573 CASKIN1Q8WXD9 1431 aa25.65■■□□□ 1.7
PIP4K2A-202ENST00000376573 CARD11Q9BXL7 1154 aa25.64■■□□□ 1.7
PIP4K2A-202ENST00000376573 HNRNPMP52272 730 aaKnown RBP eCLIP25.64■■□□□ 1.78e-7■■■□□ 17.7
PIP4K2A-202ENST00000376573 JPH4Q96JJ6 628 aa25.64■■□□□ 1.69
PIP4K2A-202ENST00000376573 PCF11O94913 1555 aaKnown RBP25.63■■□□□ 1.69
PIP4K2A-202ENST00000376573 DCAF11Q8TEB1 546 aa25.63■■□□□ 1.69
PIP4K2A-202ENST00000376573 NCOA2Q15596 1464 aa25.63■■□□□ 1.69
PIP4K2A-202ENST00000376573 WDR97A6NE52 1622 aa25.62■■□□□ 1.69
PIP4K2A-202ENST00000376573 CHGAP10645 457 aaKnown RBP25.61■■□□□ 1.69
PIP4K2A-202ENST00000376573 MYOM3Q5VTT5 1437 aa25.57■■□□□ 1.68
PIP4K2A-202ENST00000376573 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
PIP4K2A-202ENST00000376573 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
PIP4K2A-202ENST00000376573 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
PIP4K2A-202ENST00000376573 B4GALNT3Q6L9W6 998 aa25.52■■□□□ 1.68
PIP4K2A-202ENST00000376573 FYCO1Q9BQS8 1478 aa25.52■■□□□ 1.68
PIP4K2A-202ENST00000376573 CCER2I3L3R5 266 aa25.5■■□□□ 1.67
PIP4K2A-202ENST00000376573 TSHZ2Q9NRE2 1034 aa25.5■■□□□ 1.67
PIP4K2A-202ENST00000376573 NUP155O75694 1391 aa25.5■■□□□ 1.67
PIP4K2A-202ENST00000376573 CDK13Q14004 1512 aaKnown RBP25.46■■□□□ 1.67
PIP4K2A-202ENST00000376573 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
PIP4K2A-202ENST00000376573 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
PIP4K2A-202ENST00000376573 UACAQ9BZF9 1416 aa25.45■■□□□ 1.67
PIP4K2A-202ENST00000376573 WASHC2AQ641Q2 1341 aa25.45■■□□□ 1.66
PIP4K2A-202ENST00000376573 NPM2Q86SE8 214 aaKnown RBP25.43■■□□□ 1.66
PIP4K2A-202ENST00000376573 CC2D1BQ5T0F9 858 aaKnown RBP25.42■■□□□ 1.66
PIP4K2A-202ENST00000376573 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
PIP4K2A-202ENST00000376573 MAPKBP1O60336 1514 aa25.39■■□□□ 1.66
PIP4K2A-202ENST00000376573 CCDC136Q96JN2 1154 aa25.39■■□□□ 1.66
PIP4K2A-202ENST00000376573 NAIPQ13075 1403 aa25.38■■□□□ 1.65
PIP4K2A-202ENST00000376573 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
PIP4K2A-202ENST00000376573 PRG4Q92954 1404 aaPredicted RBP25.36■■□□□ 1.65
PIP4K2A-202ENST00000376573 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
PIP4K2A-202ENST00000376573 C11orf95C9JLR9 678 aaPredicted RBP25.35■■□□□ 1.65
PIP4K2A-202ENST00000376573 HFM1A2PYH4 1435 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms