RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
DDR1-226ENST00000376569 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
DDR1-226ENST00000376569 FKBP8Q14318 412 aa17.87■□□□□ 0.45
DDR1-226ENST00000376569 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
DDR1-226ENST00000376569 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
DDR1-226ENST00000376569 KIF21BO75037 1637 aa17.84■□□□□ 0.45
DDR1-226ENST00000376569 IGF1RP08069 1367 aa17.84■□□□□ 0.45
DDR1-226ENST00000376569 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.45
DDR1-226ENST00000376569 ARAP1Q96P48 1450 aa17.83■□□□□ 0.44
DDR1-226ENST00000376569 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.44
DDR1-226ENST00000376569 FAM9BQ8IZU0 186 aa17.78■□□□□ 0.44
DDR1-226ENST00000376569 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDR1-226ENST00000376569 NESP48681 1621 aa17.76■□□□□ 0.43
DDR1-226ENST00000376569 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
DDR1-226ENST00000376569 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
DDR1-226ENST00000376569 CUX1P39880 1505 aa17.73■□□□□ 0.43
DDR1-226ENST00000376569 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
DDR1-226ENST00000376569 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
DDR1-226ENST00000376569 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
DDR1-226ENST00000376569 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
DDR1-226ENST00000376569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDR1-226ENST00000376569 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
DDR1-226ENST00000376569 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
DDR1-226ENST00000376569 PHLDB1Q86UU1 1377 aa17.68■□□□□ 0.42
DDR1-226ENST00000376569 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
DDR1-226ENST00000376569 ARHGAP35Q9NRY4 1499 aa17.67■□□□□ 0.42
DDR1-226ENST00000376569 PRXQ9BXM0 1461 aa17.65■□□□□ 0.42
DDR1-226ENST00000376569 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.42
DDR1-226ENST00000376569 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
DDR1-226ENST00000376569 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
DDR1-226ENST00000376569 CFTRP13569 1480 aa17.63■□□□□ 0.41
DDR1-226ENST00000376569 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
DDR1-226ENST00000376569 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
DDR1-226ENST00000376569 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
DDR1-226ENST00000376569 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
DDR1-226ENST00000376569 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
DDR1-226ENST00000376569 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
DDR1-226ENST00000376569 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
DDR1-226ENST00000376569 MRS2Q9HD23 443 aa17.56■□□□□ 0.4
DDR1-226ENST00000376569 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.48e-8■■■■■ 39.6
DDR1-226ENST00000376569 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
DDR1-226ENST00000376569 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
DDR1-226ENST00000376569 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.391e-7■■■■■ 41.3
DDR1-226ENST00000376569 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
DDR1-226ENST00000376569 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
DDR1-226ENST00000376569 TSPY4P0CV99 314 aa17.47■□□□□ 0.39
DDR1-226ENST00000376569 TSPY10P0CW01 314 aa17.47■□□□□ 0.39
DDR1-226ENST00000376569 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
DDR1-226ENST00000376569 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
DDR1-226ENST00000376569 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
DDR1-226ENST00000376569 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
DDR1-226ENST00000376569 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
DDR1-226ENST00000376569 MYT1Q01538 1121 aa17.44■□□□□ 0.38
DDR1-226ENST00000376569 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
DDR1-226ENST00000376569 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
DDR1-226ENST00000376569 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
DDR1-226ENST00000376569 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
DDR1-226ENST00000376569 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
DDR1-226ENST00000376569 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
DDR1-226ENST00000376569 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
DDR1-226ENST00000376569 PKD2Q13563 968 aa17.37■□□□□ 0.37
DDR1-226ENST00000376569 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
DDR1-226ENST00000376569 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
DDR1-226ENST00000376569 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
DDR1-226ENST00000376569 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
DDR1-226ENST00000376569 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
DDR1-226ENST00000376569 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
DDR1-226ENST00000376569 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
DDR1-226ENST00000376569 CCDC18Q5T9S5 1454 aa17.31■□□□□ 0.36
DDR1-226ENST00000376569 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
DDR1-226ENST00000376569 B4GALNT3Q6L9W6 998 aa17.3■□□□□ 0.36
DDR1-226ENST00000376569 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
DDR1-226ENST00000376569 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
DDR1-226ENST00000376569 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
DDR1-226ENST00000376569 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
DDR1-226ENST00000376569 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
DDR1-226ENST00000376569 NCOA2Q15596 1464 aa17.24■□□□□ 0.35
DDR1-226ENST00000376569 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
DDR1-226ENST00000376569 CASKIN1Q8WXD9 1431 aa17.23■□□□□ 0.35
DDR1-226ENST00000376569 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
DDR1-226ENST00000376569 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
DDR1-226ENST00000376569 BCL11AQ9H165 835 aa17.21■□□□□ 0.35
DDR1-226ENST00000376569 NUP155O75694 1391 aa17.21■□□□□ 0.35
DDR1-226ENST00000376569 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
DDR1-226ENST00000376569 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
DDR1-226ENST00000376569 NBPF8Q3BBV2 869 aa17.18■□□□□ 0.34
DDR1-226ENST00000376569 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
DDR1-226ENST00000376569 CCER2I3L3R5 266 aa17.17■□□□□ 0.34
DDR1-226ENST00000376569 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
DDR1-226ENST00000376569 CCDC136Q96JN2 1154 aa17.17■□□□□ 0.34
DDR1-226ENST00000376569 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
DDR1-226ENST00000376569 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
DDR1-226ENST00000376569 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
DDR1-226ENST00000376569 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
DDR1-226ENST00000376569 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
DDR1-226ENST00000376569 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
DDR1-226ENST00000376569 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
DDR1-226ENST00000376569 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
DDR1-226ENST00000376569 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
DDR1-226ENST00000376569 UACAQ9BZF9 1416 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms