RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 SPDYE2Q495Y8 402 aa18.2■□□□□ 0.5
CFTRP3-201ENST00000376400 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
CFTRP3-201ENST00000376400 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
CFTRP3-201ENST00000376400 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
CFTRP3-201ENST00000376400 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
CFTRP3-201ENST00000376400 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
CFTRP3-201ENST00000376400 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
CFTRP3-201ENST00000376400 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
CFTRP3-201ENST00000376400 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
CFTRP3-201ENST00000376400 SPDYE4A6NLX3 237 aa18■□□□□ 0.47
CFTRP3-201ENST00000376400 SSUH2Q9Y2M2 353 aa18■□□□□ 0.47
CFTRP3-201ENST00000376400 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
CFTRP3-201ENST00000376400 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
CFTRP3-201ENST00000376400 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
CFTRP3-201ENST00000376400 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
CFTRP3-201ENST00000376400 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
CFTRP3-201ENST00000376400 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
CFTRP3-201ENST00000376400 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
CFTRP3-201ENST00000376400 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
CFTRP3-201ENST00000376400 CHD1O14646 1710 aa17.86■□□□□ 0.45
CFTRP3-201ENST00000376400 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
CFTRP3-201ENST00000376400 ARHGEF11O15085 1522 aa17.83■□□□□ 0.45
CFTRP3-201ENST00000376400 FKBP8Q14318 412 aa17.82■□□□□ 0.44
CFTRP3-201ENST00000376400 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
CFTRP3-201ENST00000376400 CUX1P39880 1505 aa17.76■□□□□ 0.43
CFTRP3-201ENST00000376400 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
CFTRP3-201ENST00000376400 SOGA1O94964 1423 aa17.74■□□□□ 0.43
CFTRP3-201ENST00000376400 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
CFTRP3-201ENST00000376400 SPDYE1Q8NFV5 336 aaPredicted RBP17.72■□□□□ 0.43
CFTRP3-201ENST00000376400 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
CFTRP3-201ENST00000376400 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
CFTRP3-201ENST00000376400 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CFTRP3-201ENST00000376400 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
CFTRP3-201ENST00000376400 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
CFTRP3-201ENST00000376400 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
CFTRP3-201ENST00000376400 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
CFTRP3-201ENST00000376400 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
CFTRP3-201ENST00000376400 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
CFTRP3-201ENST00000376400 CYB5RLQ6IPT4 315 aa17.62■□□□□ 0.41
CFTRP3-201ENST00000376400 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
CFTRP3-201ENST00000376400 PROM2Q8N271 834 aa17.61■□□□□ 0.41
CFTRP3-201ENST00000376400 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
CFTRP3-201ENST00000376400 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
CFTRP3-201ENST00000376400 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
CFTRP3-201ENST00000376400 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
CFTRP3-201ENST00000376400 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
CFTRP3-201ENST00000376400 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
CFTRP3-201ENST00000376400 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
CFTRP3-201ENST00000376400 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
CFTRP3-201ENST00000376400 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
CFTRP3-201ENST00000376400 PRR29P0C7W0 189 aa17.49■□□□□ 0.39
CFTRP3-201ENST00000376400 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
CFTRP3-201ENST00000376400 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
CFTRP3-201ENST00000376400 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
CFTRP3-201ENST00000376400 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
CFTRP3-201ENST00000376400 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
CFTRP3-201ENST00000376400 PIP4P2Q8N4L2 257 aa17.4■□□□□ 0.38
CFTRP3-201ENST00000376400 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
CFTRP3-201ENST00000376400 NUP160Q12769 1436 aa17.37■□□□□ 0.37
CFTRP3-201ENST00000376400 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
CFTRP3-201ENST00000376400 POTEHQ6S545 545 aa17.36■□□□□ 0.37
CFTRP3-201ENST00000376400 SHROOM2Q13796 1616 aa17.33■□□□□ 0.37
CFTRP3-201ENST00000376400 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
CFTRP3-201ENST00000376400 FHAD1B1AJZ9 1412 aa17.32■□□□□ 0.36
CFTRP3-201ENST00000376400 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
CFTRP3-201ENST00000376400 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
CFTRP3-201ENST00000376400 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
CFTRP3-201ENST00000376400 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
CFTRP3-201ENST00000376400 CREBZFQ9NS37 354 aa17.17■□□□□ 0.34
CFTRP3-201ENST00000376400 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
CFTRP3-201ENST00000376400 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
CFTRP3-201ENST00000376400 MIER1Q8N108 512 aa17.12■□□□□ 0.33
CFTRP3-201ENST00000376400 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
CFTRP3-201ENST00000376400 CUL7Q14999 1698 aa17.1■□□□□ 0.33
CFTRP3-201ENST00000376400 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
CFTRP3-201ENST00000376400 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.32
CFTRP3-201ENST00000376400 IGF1RP08069 1367 aa17.07■□□□□ 0.32
CFTRP3-201ENST00000376400 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
CFTRP3-201ENST00000376400 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
CFTRP3-201ENST00000376400 KIAA0586Q9BVV6 1533 aa17.05■□□□□ 0.32
CFTRP3-201ENST00000376400 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
CFTRP3-201ENST00000376400 VASPP50552 380 aaPredicted RBP17■□□□□ 0.31
CFTRP3-201ENST00000376400 MAPKBP1O60336 1514 aa17■□□□□ 0.31
CFTRP3-201ENST00000376400 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
CFTRP3-201ENST00000376400 DIP2BQ9P265 1576 aa16.96■□□□□ 0.31
CFTRP3-201ENST00000376400 HAX1O00165 279 aa16.95■□□□□ 0.3
CFTRP3-201ENST00000376400 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
CFTRP3-201ENST00000376400 NPM1P06748 294 aaKnown RBP eCLIP16.94■□□□□ 0.3
CFTRP3-201ENST00000376400 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
CFTRP3-201ENST00000376400 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
CFTRP3-201ENST00000376400 IQGAP2Q13576 1575 aa16.89■□□□□ 0.3
CFTRP3-201ENST00000376400 FAM69CQ0P6D2 419 aa16.88■□□□□ 0.29
CFTRP3-201ENST00000376400 PTPRGP23470 1445 aa16.86■□□□□ 0.29
CFTRP3-201ENST00000376400 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
CFTRP3-201ENST00000376400 C19orf67A6NJJ6 358 aa16.83■□□□□ 0.28
CFTRP3-201ENST00000376400 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.28
CFTRP3-201ENST00000376400 DISP1Q96F81 1524 aa16.83■□□□□ 0.28
CFTRP3-201ENST00000376400 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
CFTRP3-201ENST00000376400 ABCC2Q92887 1545 aa16.82■□□□□ 0.28
CFTRP3-201ENST00000376400 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms