RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
TM9SF2-201ENST00000376387 MAPKBP1O60336 1514 aa16.43■□□□□ 0.22
TM9SF2-201ENST00000376387 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
TM9SF2-201ENST00000376387 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
TM9SF2-201ENST00000376387 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
TM9SF2-201ENST00000376387 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
TM9SF2-201ENST00000376387 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.22
TM9SF2-201ENST00000376387 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
TM9SF2-201ENST00000376387 HIRIP3Q9BW71 556 aaPredicted RBP16.39■□□□□ 0.21
TM9SF2-201ENST00000376387 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
TM9SF2-201ENST00000376387 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
TM9SF2-201ENST00000376387 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
TM9SF2-201ENST00000376387 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
TM9SF2-201ENST00000376387 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
TM9SF2-201ENST00000376387 PPP1R15AO75807 674 aaPredicted RBP16.32■□□□□ 0.2
TM9SF2-201ENST00000376387 CUX1P39880 1505 aa16.3■□□□□ 0.2
TM9SF2-201ENST00000376387 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.2
TM9SF2-201ENST00000376387 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
TM9SF2-201ENST00000376387 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
TM9SF2-201ENST00000376387 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
TM9SF2-201ENST00000376387 NEFLP07196 543 aa16.24■□□□□ 0.19
TM9SF2-201ENST00000376387 PHLDB1Q86UU1 1377 aa16.24■□□□□ 0.19
TM9SF2-201ENST00000376387 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
TM9SF2-201ENST00000376387 MSH5O43196 834 aa16.23■□□□□ 0.19
TM9SF2-201ENST00000376387 CFTRP13569 1480 aa16.23■□□□□ 0.19
TM9SF2-201ENST00000376387 TIAM1Q13009 1591 aa16.23■□□□□ 0.19
TM9SF2-201ENST00000376387 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
TM9SF2-201ENST00000376387 ANP32CO43423 234 aa16.18■□□□□ 0.18
TM9SF2-201ENST00000376387 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
TM9SF2-201ENST00000376387 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
TM9SF2-201ENST00000376387 IRX6P78412 446 aaPredicted RBP16.16■□□□□ 0.18
TM9SF2-201ENST00000376387 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
TM9SF2-201ENST00000376387 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
TM9SF2-201ENST00000376387 ATP1B4Q9UN42 357 aaPredicted RBP16.13■□□□□ 0.17
TM9SF2-201ENST00000376387 IGF1RP08069 1367 aa16.11■□□□□ 0.17
TM9SF2-201ENST00000376387 MAP3K1Q13233 1512 aa16.11■□□□□ 0.17
TM9SF2-201ENST00000376387 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
TM9SF2-201ENST00000376387 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
TM9SF2-201ENST00000376387 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
TM9SF2-201ENST00000376387 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
TM9SF2-201ENST00000376387 PKNOX2Q96KN3 472 aa16.04■□□□□ 0.16
TM9SF2-201ENST00000376387 CFAP43Q8NDM7 1665 aa16.04■□□□□ 0.16
TM9SF2-201ENST00000376387 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
TM9SF2-201ENST00000376387 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
TM9SF2-201ENST00000376387 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
TM9SF2-201ENST00000376387 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
TM9SF2-201ENST00000376387 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
TM9SF2-201ENST00000376387 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
TM9SF2-201ENST00000376387 TULP1O00294 542 aaPredicted RBP15.98■□□□□ 0.15
TM9SF2-201ENST00000376387 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
TM9SF2-201ENST00000376387 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
TM9SF2-201ENST00000376387 PTPRKQ15262 1439 aa15.96■□□□□ 0.15
TM9SF2-201ENST00000376387 CCDC18Q5T9S5 1454 aa15.95■□□□□ 0.14
TM9SF2-201ENST00000376387 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
TM9SF2-201ENST00000376387 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
TM9SF2-201ENST00000376387 NESP48681 1621 aa15.93■□□□□ 0.14
TM9SF2-201ENST00000376387 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
TM9SF2-201ENST00000376387 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■■■□□ 18.1
TM9SF2-201ENST00000376387 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
TM9SF2-201ENST00000376387 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
TM9SF2-201ENST00000376387 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
TM9SF2-201ENST00000376387 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
TM9SF2-201ENST00000376387 HSPA5P11021 654 aaKnown RBP15.89■□□□□ 0.13
TM9SF2-201ENST00000376387 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
TM9SF2-201ENST00000376387 B4GALNT3Q6L9W6 998 aa15.88■□□□□ 0.13
TM9SF2-201ENST00000376387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
TM9SF2-201ENST00000376387 FYCO1Q9BQS8 1478 aa15.88■□□□□ 0.13
TM9SF2-201ENST00000376387 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
TM9SF2-201ENST00000376387 HFM1A2PYH4 1435 aa15.86■□□□□ 0.13
TM9SF2-201ENST00000376387 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
TM9SF2-201ENST00000376387 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
TM9SF2-201ENST00000376387 PDIA4P13667 645 aaKnown RBP15.85■□□□□ 0.13
TM9SF2-201ENST00000376387 NAIPQ13075 1403 aa15.85■□□□□ 0.13
TM9SF2-201ENST00000376387 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
TM9SF2-201ENST00000376387 C11orf95C9JLR9 678 aaPredicted RBP15.84■□□□□ 0.13
TM9SF2-201ENST00000376387 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.13
TM9SF2-201ENST00000376387 PDE4CQ08493 712 aa15.82■□□□□ 0.12
TM9SF2-201ENST00000376387 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
TM9SF2-201ENST00000376387 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
TM9SF2-201ENST00000376387 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
TM9SF2-201ENST00000376387 RRP7BPQ9NSQ0 103 aa15.8■□□□□ 0.12
TM9SF2-201ENST00000376387 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
TM9SF2-201ENST00000376387 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
TM9SF2-201ENST00000376387 DEKP35659 375 aaKnown RBP15.8■□□□□ 0.12
TM9SF2-201ENST00000376387 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
TM9SF2-201ENST00000376387 CHIC2Q9UKJ5 165 aa15.79■□□□□ 0.12
TM9SF2-201ENST00000376387 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
TM9SF2-201ENST00000376387 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
TM9SF2-201ENST00000376387 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.12
TM9SF2-201ENST00000376387 NCOA2Q15596 1464 aa15.77■□□□□ 0.12
TM9SF2-201ENST00000376387 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.12
TM9SF2-201ENST00000376387 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.11
TM9SF2-201ENST00000376387 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.11
TM9SF2-201ENST00000376387 ERICH6BQ5W0A0 696 aa15.77■□□□□ 0.11
TM9SF2-201ENST00000376387 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.11
TM9SF2-201ENST00000376387 EIF4G2P78344 907 aaKnown RBP eCLIP15.76■□□□□ 0.11
TM9SF2-201ENST00000376387 FOXD1Q16676 465 aa15.76■□□□□ 0.11
TM9SF2-201ENST00000376387 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
TM9SF2-201ENST00000376387 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
TM9SF2-201ENST00000376387 NBR1Q14596 966 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms