RNA–Protein interactions for RNA: ENST00000376086.7

LST1-204, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-204ENST00000376086 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
LST1-204ENST00000376086 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
LST1-204ENST00000376086 ZNF608Q9ULD9 1512 aaPredicted RBP24.16■■□□□ 1.46
LST1-204ENST00000376086 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
LST1-204ENST00000376086 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
LST1-204ENST00000376086 SPDYE2BA6NHP3 402 aa24.09■■□□□ 1.45
LST1-204ENST00000376086 SPDYE6P0CI01 402 aa24.09■■□□□ 1.45
LST1-204ENST00000376086 SPDYE2Q495Y8 402 aa24.09■■□□□ 1.45
LST1-204ENST00000376086 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
LST1-204ENST00000376086 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
LST1-204ENST00000376086 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
LST1-204ENST00000376086 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
LST1-204ENST00000376086 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
LST1-204ENST00000376086 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.43
LST1-204ENST00000376086 AKT1S1Q96B36 256 aa23.96■■□□□ 1.43
LST1-204ENST00000376086 ZNF692Q9BU19 519 aaPredicted RBP23.94■■□□□ 1.42
LST1-204ENST00000376086 CUX1P39880 1505 aa23.93■■□□□ 1.42
LST1-204ENST00000376086 SSUH2Q9Y2M2 353 aa23.92■■□□□ 1.42
LST1-204ENST00000376086 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
LST1-204ENST00000376086 SOGA1O94964 1423 aa23.9■■□□□ 1.42
LST1-204ENST00000376086 CHD1O14646 1710 aa23.87■■□□□ 1.41
LST1-204ENST00000376086 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
LST1-204ENST00000376086 SPDYE4A6NLX3 237 aa23.82■■□□□ 1.4
LST1-204ENST00000376086 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
LST1-204ENST00000376086 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
LST1-204ENST00000376086 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
LST1-204ENST00000376086 REM2Q8IYK8 340 aaPredicted RBP23.74■■□□□ 1.39
LST1-204ENST00000376086 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
LST1-204ENST00000376086 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
LST1-204ENST00000376086 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
LST1-204ENST00000376086 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
LST1-204ENST00000376086 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
LST1-204ENST00000376086 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
LST1-204ENST00000376086 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
LST1-204ENST00000376086 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
LST1-204ENST00000376086 FKBP8Q14318 412 aa23.6■■□□□ 1.37
LST1-204ENST00000376086 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
LST1-204ENST00000376086 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
LST1-204ENST00000376086 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
LST1-204ENST00000376086 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
LST1-204ENST00000376086 TOP2BQ02880 1626 aa23.58■■□□□ 1.36
LST1-204ENST00000376086 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
LST1-204ENST00000376086 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
LST1-204ENST00000376086 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
LST1-204ENST00000376086 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
LST1-204ENST00000376086 PITPNM1O00562 1244 aa23.48■■□□□ 1.35
LST1-204ENST00000376086 PROM2Q8N271 834 aa23.48■■□□□ 1.35
LST1-204ENST00000376086 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
LST1-204ENST00000376086 SPDYE1Q8NFV5 336 aaPredicted RBP23.41■■□□□ 1.34
LST1-204ENST00000376086 ADAMTS12P58397 1594 aa23.4■■□□□ 1.34
LST1-204ENST00000376086 CHRDL2Q6WN34 429 aa23.4■■□□□ 1.34
LST1-204ENST00000376086 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
LST1-204ENST00000376086 CLEC11AQ9Y240 323 aa23.31■■□□□ 1.32
LST1-204ENST00000376086 CEP170Q5SW79 1584 aa23.3■■□□□ 1.32
LST1-204ENST00000376086 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
LST1-204ENST00000376086 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
LST1-204ENST00000376086 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
LST1-204ENST00000376086 NUP160Q12769 1436 aa23.23■■□□□ 1.31
LST1-204ENST00000376086 STAG3Q9UJ98 1225 aa23.15■■□□□ 1.3
LST1-204ENST00000376086 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
LST1-204ENST00000376086 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
LST1-204ENST00000376086 FXR2P51116 673 aaKnown RBP eCLIP23.11■■□□□ 1.29
LST1-204ENST00000376086 PRR29P0C7W0 189 aa23.07■■□□□ 1.28
LST1-204ENST00000376086 PIP4P2Q8N4L2 257 aa23.07■■□□□ 1.28
LST1-204ENST00000376086 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
LST1-204ENST00000376086 IGF1RP08069 1367 aa23.06■■□□□ 1.28
LST1-204ENST00000376086 CUL7Q14999 1698 aa23.05■■□□□ 1.28
LST1-204ENST00000376086 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
LST1-204ENST00000376086 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
LST1-204ENST00000376086 POTEHQ6S545 545 aa22.98■■□□□ 1.27
LST1-204ENST00000376086 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
LST1-204ENST00000376086 KIAA0586Q9BVV6 1533 aa22.91■■□□□ 1.26
LST1-204ENST00000376086 PRKAR2AP13861 404 aaKnown RBP22.86■■□□□ 1.25
LST1-204ENST00000376086 TTBK1Q5TCY1 1321 aaPredicted RBP22.85■■□□□ 1.25
LST1-204ENST00000376086 CHADLQ6NUI6 762 aa22.82■■□□□ 1.24
LST1-204ENST00000376086 FBXO3Q9UK99 471 aa22.8■■□□□ 1.24
LST1-204ENST00000376086 CREBZFQ9NS37 354 aa22.79■■□□□ 1.24
LST1-204ENST00000376086 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
LST1-204ENST00000376086 ADCY10Q96PN6 1610 aa22.78■■□□□ 1.24
LST1-204ENST00000376086 RAPGEF2Q9Y4G8 1499 aa22.75■■□□□ 1.23
LST1-204ENST00000376086 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
LST1-204ENST00000376086 NPM1P06748 294 aaKnown RBP eCLIP22.72■■□□□ 1.23
LST1-204ENST00000376086 PTPRGP23470 1445 aa22.69■■□□□ 1.22
LST1-204ENST00000376086 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
LST1-204ENST00000376086 TNIKQ9UKE5 1360 aa22.64■■□□□ 1.22
LST1-204ENST00000376086 CTTNBP2Q8WZ74 1663 aa22.64■■□□□ 1.21
LST1-204ENST00000376086 FAM69CQ0P6D2 419 aa22.63■■□□□ 1.21
LST1-204ENST00000376086 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
LST1-204ENST00000376086 DISP1Q96F81 1524 aa22.62■■□□□ 1.21
LST1-204ENST00000376086 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
LST1-204ENST00000376086 UGGT2Q9NYU1 1516 aa22.59■■□□□ 1.21
LST1-204ENST00000376086 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
LST1-204ENST00000376086 MIER1Q8N108 512 aa22.58■■□□□ 1.21
LST1-204ENST00000376086 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
LST1-204ENST00000376086 FARP1Q9Y4F1 1045 aaPredicted RBP22.57■■□□□ 1.2
LST1-204ENST00000376086 TSPOAP1O95153 1857 aa22.57■■□□□ 1.2
LST1-204ENST00000376086 MNX1P50219 401 aaPredicted RBP22.56■■□□□ 1.2
LST1-204ENST00000376086 VASPP50552 380 aaPredicted RBP22.54■■□□□ 1.2
LST1-204ENST00000376086 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
LST1-204ENST00000376086 ABCC2Q92887 1545 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms