RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
MSH5-204ENST00000375755 MIER1Q8N108 512 aa19.21■□□□□ 0.67
MSH5-204ENST00000375755 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
MSH5-204ENST00000375755 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
MSH5-204ENST00000375755 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
MSH5-204ENST00000375755 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
MSH5-204ENST00000375755 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
MSH5-204ENST00000375755 APLP2Q06481 763 aa19.09■□□□□ 0.65
MSH5-204ENST00000375755 KANK4Q5T7N3 995 aaPredicted RBP19.08■□□□□ 0.65
MSH5-204ENST00000375755 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
MSH5-204ENST00000375755 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
MSH5-204ENST00000375755 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.642e-8■■■■■ 33.7
MSH5-204ENST00000375755 CUL7Q14999 1698 aa19.01■□□□□ 0.63
MSH5-204ENST00000375755 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
MSH5-204ENST00000375755 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
MSH5-204ENST00000375755 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
MSH5-204ENST00000375755 FHOD3Q2V2M9 1422 aa18.95■□□□□ 0.62
MSH5-204ENST00000375755 CTTNBP2Q8WZ74 1663 aa18.94■□□□□ 0.62
MSH5-204ENST00000375755 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
MSH5-204ENST00000375755 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
MSH5-204ENST00000375755 SUPT16HQ9Y5B9 1047 aaKnown RBP18.91■□□□□ 0.62
MSH5-204ENST00000375755 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
MSH5-204ENST00000375755 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
MSH5-204ENST00000375755 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
MSH5-204ENST00000375755 CLSPNQ9HAW4 1339 aa18.84■□□□□ 0.61
MSH5-204ENST00000375755 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
MSH5-204ENST00000375755 ANP32EQ9BTT0 268 aa18.82■□□□□ 0.6
MSH5-204ENST00000375755 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
MSH5-204ENST00000375755 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
MSH5-204ENST00000375755 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
MSH5-204ENST00000375755 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
MSH5-204ENST00000375755 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
MSH5-204ENST00000375755 ITGAEP38570 1179 aa18.76■□□□□ 0.59
MSH5-204ENST00000375755 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
MSH5-204ENST00000375755 SAMD9Q5K651 1589 aa18.75■□□□□ 0.59
MSH5-204ENST00000375755 LRRC9Q6ZRR7 1453 aa18.74■□□□□ 0.59
MSH5-204ENST00000375755 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
MSH5-204ENST00000375755 RRBP1Q9P2E9 1410 aaKnown RBP18.71■□□□□ 0.58
MSH5-204ENST00000375755 PHLDB1Q86UU1 1377 aa18.7■□□□□ 0.58
MSH5-204ENST00000375755 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
MSH5-204ENST00000375755 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
MSH5-204ENST00000375755 FBLN2P98095 1184 aa18.69■□□□□ 0.58
MSH5-204ENST00000375755 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
MSH5-204ENST00000375755 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
MSH5-204ENST00000375755 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
MSH5-204ENST00000375755 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
MSH5-204ENST00000375755 ARID3CA6NKF2 412 aa18.67■□□□□ 0.58
MSH5-204ENST00000375755 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
MSH5-204ENST00000375755 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
MSH5-204ENST00000375755 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
MSH5-204ENST00000375755 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
MSH5-204ENST00000375755 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
MSH5-204ENST00000375755 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
MSH5-204ENST00000375755 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
MSH5-204ENST00000375755 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
MSH5-204ENST00000375755 KIAA0586Q9BVV6 1533 aa18.55■□□□□ 0.56
MSH5-204ENST00000375755 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
MSH5-204ENST00000375755 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
MSH5-204ENST00000375755 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
MSH5-204ENST00000375755 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
MSH5-204ENST00000375755 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
MSH5-204ENST00000375755 CHD1O14646 1710 aa18.52■□□□□ 0.55
MSH5-204ENST00000375755 KIAA0556O60303 1618 aa18.5■□□□□ 0.55
MSH5-204ENST00000375755 BCANQ96GW7 911 aa18.5■□□□□ 0.55
MSH5-204ENST00000375755 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
MSH5-204ENST00000375755 NUP160Q12769 1436 aa18.48■□□□□ 0.55
MSH5-204ENST00000375755 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
MSH5-204ENST00000375755 EPRSP07814 1512 aaKnown RBP18.46■□□□□ 0.55
MSH5-204ENST00000375755 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
MSH5-204ENST00000375755 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
MSH5-204ENST00000375755 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
MSH5-204ENST00000375755 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
MSH5-204ENST00000375755 FKBP8Q14318 412 aa18.41■□□□□ 0.54
MSH5-204ENST00000375755 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
MSH5-204ENST00000375755 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
MSH5-204ENST00000375755 PTPRKQ15262 1439 aa18.39■□□□□ 0.54
MSH5-204ENST00000375755 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
MSH5-204ENST00000375755 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
MSH5-204ENST00000375755 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
MSH5-204ENST00000375755 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
MSH5-204ENST00000375755 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
MSH5-204ENST00000375755 MYOM3Q5VTT5 1437 aa18.37■□□□□ 0.53
MSH5-204ENST00000375755 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
MSH5-204ENST00000375755 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
MSH5-204ENST00000375755 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
MSH5-204ENST00000375755 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
MSH5-204ENST00000375755 SHROOM2Q13796 1616 aa18.32■□□□□ 0.52
MSH5-204ENST00000375755 PTPN23Q9H3S7 1636 aa18.31■□□□□ 0.52
MSH5-204ENST00000375755 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
MSH5-204ENST00000375755 MAPKBP1O60336 1514 aa18.29■□□□□ 0.52
MSH5-204ENST00000375755 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
MSH5-204ENST00000375755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.28■□□□□ 0.52
MSH5-204ENST00000375755 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
MSH5-204ENST00000375755 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.51
MSH5-204ENST00000375755 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
MSH5-204ENST00000375755 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
MSH5-204ENST00000375755 MSH5O43196 834 aa18.23■□□□□ 0.51
MSH5-204ENST00000375755 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
MSH5-204ENST00000375755 NEFLP07196 543 aa18.21■□□□□ 0.51
MSH5-204ENST00000375755 KIF14Q15058 1648 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms