RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ARAP1Q96P48 1450 aa29.01■■■□□ 2.23
TMEFF1-201ENST00000374879 ANO8Q9HCE9 1232 aaPredicted RBP28.98■■■□□ 2.23
TMEFF1-201ENST00000374879 CDK11AQ9UQ88 783 aaPredicted RBP28.95■■■□□ 2.23
TMEFF1-201ENST00000374879 KANK4Q5T7N3 995 aaPredicted RBP28.87■■■□□ 2.21
TMEFF1-201ENST00000374879 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
TMEFF1-201ENST00000374879 CCER2I3L3R5 266 aa28.81■■■□□ 2.2
TMEFF1-201ENST00000374879 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
TMEFF1-201ENST00000374879 IRX6P78412 446 aaPredicted RBP28.79■■■□□ 2.2
TMEFF1-201ENST00000374879 ARHGAP35Q9NRY4 1499 aa28.76■■■□□ 2.19
TMEFF1-201ENST00000374879 CUX2O14529 1486 aa28.74■■■□□ 2.19
TMEFF1-201ENST00000374879 ANP32CO43423 234 aa28.72■■■□□ 2.19
TMEFF1-201ENST00000374879 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
TMEFF1-201ENST00000374879 SALL2Q9Y467 1007 aaPredicted RBP28.7■■■□□ 2.18
TMEFF1-201ENST00000374879 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.18
TMEFF1-201ENST00000374879 IGF1RP08069 1367 aa28.69■■■□□ 2.18
TMEFF1-201ENST00000374879 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
TMEFF1-201ENST00000374879 NBR1Q14596 966 aa28.68■■■□□ 2.18
TMEFF1-201ENST00000374879 MAPKBP1O60336 1514 aa28.67■■■□□ 2.18
TMEFF1-201ENST00000374879 HIRIP3Q9BW71 556 aaPredicted RBP28.67■■■□□ 2.18
TMEFF1-201ENST00000374879 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
TMEFF1-201ENST00000374879 ERICH6BQ5W0A0 696 aa28.59■■■□□ 2.17
TMEFF1-201ENST00000374879 NOP58Q9Y2X3 529 aaKnown RBP28.58■■■□□ 2.17
TMEFF1-201ENST00000374879 CCNB3Q8WWL7 1395 aa28.58■■■□□ 2.17
TMEFF1-201ENST00000374879 RAB3GAP2Q9H2M9 1393 aa28.58■■■□□ 2.17
TMEFF1-201ENST00000374879 CARMIL1Q5VZK9 1371 aa28.58■■■□□ 2.17
TMEFF1-201ENST00000374879 SIN3AQ96ST3 1273 aa28.57■■■□□ 2.16
TMEFF1-201ENST00000374879 PAK3O75914 559 aaPredicted RBP28.55■■■□□ 2.16
TMEFF1-201ENST00000374879 HNRNPUQ00839 825 aaKnown RBP eCLIP28.53■■■□□ 2.16
TMEFF1-201ENST00000374879 PPP4R2Q9NY27 417 aa28.52■■■□□ 2.16
TMEFF1-201ENST00000374879 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
TMEFF1-201ENST00000374879 CCDC136Q96JN2 1154 aa28.5■■■□□ 2.15
TMEFF1-201ENST00000374879 TIAM1Q13009 1591 aa28.46■■■□□ 2.15
TMEFF1-201ENST00000374879 FANCD2Q9BXW9 1451 aa28.45■■■□□ 2.14
TMEFF1-201ENST00000374879 IL27Q8NEV9 243 aa28.42■■■□□ 2.14
TMEFF1-201ENST00000374879 MAP3K1Q13233 1512 aa28.42■■■□□ 2.14
TMEFF1-201ENST00000374879 B4GALNT3Q6L9W6 998 aa28.41■■■□□ 2.14
TMEFF1-201ENST00000374879 LRRC9Q6ZRR7 1453 aa28.35■■■□□ 2.13
TMEFF1-201ENST00000374879 RTN4Q9NQC3 1192 aaKnown RBP28.35■■■□□ 2.13
TMEFF1-201ENST00000374879 SETD5Q9C0A6 1442 aa28.33■■■□□ 2.13
TMEFF1-201ENST00000374879 FHAD1B1AJZ9 1412 aa28.33■■■□□ 2.13
TMEFF1-201ENST00000374879 P3H3Q8IVL6 736 aa28.32■■■□□ 2.12
TMEFF1-201ENST00000374879 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
TMEFF1-201ENST00000374879 RTL5Q5HYW3 569 aaPredicted RBP28.31■■■□□ 2.12
TMEFF1-201ENST00000374879 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
TMEFF1-201ENST00000374879 TIMELESSQ9UNS1 1208 aa28.31■■■□□ 2.12
TMEFF1-201ENST00000374879 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.28■■■□□ 2.12
TMEFF1-201ENST00000374879 PHLDB1Q86UU1 1377 aa28.28■■■□□ 2.12
TMEFF1-201ENST00000374879 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
TMEFF1-201ENST00000374879 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.12
TMEFF1-201ENST00000374879 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
TMEFF1-201ENST00000374879 TOPBP1Q92547 1522 aa28.26■■■□□ 2.11
TMEFF1-201ENST00000374879 ATP1B4Q9UN42 357 aaPredicted RBP28.25■■■□□ 2.11
TMEFF1-201ENST00000374879 NESP48681 1621 aa28.23■■■□□ 2.11
TMEFF1-201ENST00000374879 CFAP43Q8NDM7 1665 aa28.22■■■□□ 2.11
TMEFF1-201ENST00000374879 UBE2Q2Q8WVN8 375 aa28.22■■■□□ 2.11
TMEFF1-201ENST00000374879 IPO9Q96P70 1041 aaKnown RBP28.22■■■□□ 2.11
TMEFF1-201ENST00000374879 FHOD3Q2V2M9 1422 aa28.21■■■□□ 2.11
TMEFF1-201ENST00000374879 FAM50AQ14320 339 aaKnown RBP28.21■■■□□ 2.11
TMEFF1-201ENST00000374879 ZBTB47Q9UFB7 747 aaPredicted RBP28.16■■■□□ 2.1
TMEFF1-201ENST00000374879 ANP32AP39687 249 aaKnown RBP28.15■■■□□ 2.1
TMEFF1-201ENST00000374879 EFCAB5A4FU69 1503 aa28.13■■■□□ 2.09
TMEFF1-201ENST00000374879 CUL7Q14999 1698 aa28.13■■■□□ 2.09
TMEFF1-201ENST00000374879 FYCO1Q9BQS8 1478 aa28.12■■■□□ 2.09
TMEFF1-201ENST00000374879 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
TMEFF1-201ENST00000374879 CTTNBP2Q8WZ74 1663 aa28.08■■■□□ 2.09
TMEFF1-201ENST00000374879 CCDC184Q52MB2 194 aa28.07■■■□□ 2.08
TMEFF1-201ENST00000374879 WASHC2AQ641Q2 1341 aa28.07■■■□□ 2.08
TMEFF1-201ENST00000374879 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.08
TMEFF1-201ENST00000374879 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
TMEFF1-201ENST00000374879 TONSLQ96HA7 1378 aa28.01■■■□□ 2.08
TMEFF1-201ENST00000374879 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
TMEFF1-201ENST00000374879 FMN1Q68DA7 1419 aa27.99■■■□□ 2.07
TMEFF1-201ENST00000374879 FAM9BQ8IZU0 186 aa27.98■■■□□ 2.07
TMEFF1-201ENST00000374879 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
TMEFF1-201ENST00000374879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.95■■■□□ 2.06
TMEFF1-201ENST00000374879 ZBED9Q6R2W3 1325 aa27.94■■■□□ 2.06
TMEFF1-201ENST00000374879 SNAPC4Q5SXM2 1469 aa27.93■■■□□ 2.06
TMEFF1-201ENST00000374879 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
TMEFF1-201ENST00000374879 NEFMP07197 916 aa27.9■■■□□ 2.06
TMEFF1-201ENST00000374879 FGD6Q6ZV73 1430 aa27.9■■■□□ 2.06
TMEFF1-201ENST00000374879 C11orf95C9JLR9 678 aaPredicted RBP27.89■■■□□ 2.06
TMEFF1-201ENST00000374879 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.06
TMEFF1-201ENST00000374879 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.05
TMEFF1-201ENST00000374879 LAS1LQ9Y4W2 734 aaKnown RBP27.88■■■□□ 2.05
TMEFF1-201ENST00000374879 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
TMEFF1-201ENST00000374879 SAMD9Q5K651 1589 aa27.85■■■□□ 2.05
TMEFF1-201ENST00000374879 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
TMEFF1-201ENST00000374879 MRS2Q9HD23 443 aa27.83■■■□□ 2.05
TMEFF1-201ENST00000374879 USP35Q9P2H5 1018 aa27.83■■■□□ 2.05
TMEFF1-201ENST00000374879 AKNAQ7Z591 1439 aa27.82■■■□□ 2.04
TMEFF1-201ENST00000374879 NPM2Q86SE8 214 aaKnown RBP27.81■■■□□ 2.04
TMEFF1-201ENST00000374879 EIF5BO60841 1220 aaKnown RBP27.8■■■□□ 2.04
TMEFF1-201ENST00000374879 HSPA5P11021 654 aaKnown RBP27.8■■■□□ 2.04
TMEFF1-201ENST00000374879 BRPF3Q9ULD4 1205 aa27.8■■■□□ 2.04
TMEFF1-201ENST00000374879 PRKRIP1Q9H875 184 aaPredicted RBP27.79■■■□□ 2.04
TMEFF1-201ENST00000374879 LRRIQ1Q96JM4 1722 aa27.79■■■□□ 2.04
TMEFF1-201ENST00000374879 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
TMEFF1-201ENST00000374879 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
TMEFF1-201ENST00000374879 CNTLNQ9NXG0 1405 aa27.75■■■□□ 2.03
TMEFF1-201ENST00000374879 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms