RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 DNMBPQ6XZF7 1577 aa19.03■□□□□ 0.64
SNX12-202ENST00000374274 FANCIQ9NVI1 1328 aa19.02■□□□□ 0.63
SNX12-202ENST00000374274 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
SNX12-202ENST00000374274 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
SNX12-202ENST00000374274 BCANQ96GW7 911 aa18.98■□□□□ 0.63
SNX12-202ENST00000374274 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
SNX12-202ENST00000374274 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
SNX12-202ENST00000374274 KCNH8Q96L42 1107 aa18.95■□□□□ 0.62
SNX12-202ENST00000374274 CCNB3Q8WWL7 1395 aa18.95■□□□□ 0.62
SNX12-202ENST00000374274 IGF1RP08069 1367 aa18.93■□□□□ 0.62
SNX12-202ENST00000374274 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
SNX12-202ENST00000374274 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
SNX12-202ENST00000374274 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
SNX12-202ENST00000374274 MSH5O43196 834 aa18.89■□□□□ 0.61
SNX12-202ENST00000374274 RANGAP1P46060 587 aaPredicted RBP18.89■□□□□ 0.61
SNX12-202ENST00000374274 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
SNX12-202ENST00000374274 URB2Q14146 1524 aaKnown RBP18.88■□□□□ 0.61
SNX12-202ENST00000374274 PPP1R15AO75807 674 aaPredicted RBP18.88■□□□□ 0.61
SNX12-202ENST00000374274 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
SNX12-202ENST00000374274 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
SNX12-202ENST00000374274 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
SNX12-202ENST00000374274 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
SNX12-202ENST00000374274 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
SNX12-202ENST00000374274 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
SNX12-202ENST00000374274 WDR97A6NE52 1622 aa18.83■□□□□ 0.6
SNX12-202ENST00000374274 ERICH6BQ5W0A0 696 aa18.82■□□□□ 0.6
SNX12-202ENST00000374274 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
SNX12-202ENST00000374274 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
SNX12-202ENST00000374274 ANP32CO43423 234 aa18.78■□□□□ 0.6
SNX12-202ENST00000374274 SETD5Q9C0A6 1442 aa18.78■□□□□ 0.6
SNX12-202ENST00000374274 CDK11AQ9UQ88 783 aaPredicted RBP18.78■□□□□ 0.6
SNX12-202ENST00000374274 CUL7Q14999 1698 aa18.75■□□□□ 0.59
SNX12-202ENST00000374274 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
SNX12-202ENST00000374274 ITGAEP38570 1179 aa18.73■□□□□ 0.59
SNX12-202ENST00000374274 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
SNX12-202ENST00000374274 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
SNX12-202ENST00000374274 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
SNX12-202ENST00000374274 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
SNX12-202ENST00000374274 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
SNX12-202ENST00000374274 TARBP1Q13395 1621 aaKnown RBP18.66■□□□□ 0.58
SNX12-202ENST00000374274 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
SNX12-202ENST00000374274 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
SNX12-202ENST00000374274 CTTNBP2Q8WZ74 1663 aa18.62■□□□□ 0.57
SNX12-202ENST00000374274 DEKP35659 375 aaKnown RBP18.61■□□□□ 0.57
SNX12-202ENST00000374274 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
SNX12-202ENST00000374274 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
SNX12-202ENST00000374274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.57
SNX12-202ENST00000374274 CFAP43Q8NDM7 1665 aa18.56■□□□□ 0.56
SNX12-202ENST00000374274 EFCAB5A4FU69 1503 aa18.55■□□□□ 0.56
SNX12-202ENST00000374274 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
SNX12-202ENST00000374274 WDR62O43379 1518 aa18.54■□□□□ 0.56
SNX12-202ENST00000374274 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
SNX12-202ENST00000374274 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
SNX12-202ENST00000374274 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX12-202ENST00000374274 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
SNX12-202ENST00000374274 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
SNX12-202ENST00000374274 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
SNX12-202ENST00000374274 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
SNX12-202ENST00000374274 P3H3Q8IVL6 736 aa18.47■□□□□ 0.55
SNX12-202ENST00000374274 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX12-202ENST00000374274 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
SNX12-202ENST00000374274 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
SNX12-202ENST00000374274 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
SNX12-202ENST00000374274 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
SNX12-202ENST00000374274 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
SNX12-202ENST00000374274 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
SNX12-202ENST00000374274 SAMD9Q5K651 1589 aa18.42■□□□□ 0.54
SNX12-202ENST00000374274 NCOA2Q15596 1464 aa18.41■□□□□ 0.54
SNX12-202ENST00000374274 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
SNX12-202ENST00000374274 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
SNX12-202ENST00000374274 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
SNX12-202ENST00000374274 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
SNX12-202ENST00000374274 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
SNX12-202ENST00000374274 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
SNX12-202ENST00000374274 IRX6P78412 446 aaPredicted RBP18.38■□□□□ 0.53
SNX12-202ENST00000374274 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
SNX12-202ENST00000374274 FAM50AQ14320 339 aaKnown RBP18.37■□□□□ 0.53
SNX12-202ENST00000374274 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
SNX12-202ENST00000374274 CCDC18Q5T9S5 1454 aa18.35■□□□□ 0.53
SNX12-202ENST00000374274 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
SNX12-202ENST00000374274 ATP1B4Q9UN42 357 aaPredicted RBP18.34■□□□□ 0.53
SNX12-202ENST00000374274 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
SNX12-202ENST00000374274 CNTLNQ9NXG0 1405 aa18.34■□□□□ 0.53
SNX12-202ENST00000374274 IQGAP2Q13576 1575 aa18.33■□□□□ 0.53
SNX12-202ENST00000374274 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
SNX12-202ENST00000374274 PTPN23Q9H3S7 1636 aa18.31■□□□□ 0.52
SNX12-202ENST00000374274 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
SNX12-202ENST00000374274 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
SNX12-202ENST00000374274 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
SNX12-202ENST00000374274 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
SNX12-202ENST00000374274 B4GALNT3Q6L9W6 998 aa18.27■□□□□ 0.52
SNX12-202ENST00000374274 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.51
SNX12-202ENST00000374274 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
SNX12-202ENST00000374274 NBR1Q14596 966 aa18.25■□□□□ 0.51
SNX12-202ENST00000374274 LRRIQ1Q96JM4 1722 aa18.24■□□□□ 0.51
SNX12-202ENST00000374274 SMG6Q86US8 1419 aaKnown RBP18.24■□□□□ 0.51
SNX12-202ENST00000374274 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
SNX12-202ENST00000374274 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
SNX12-202ENST00000374274 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
SNX12-202ENST00000374274 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms