RNA–Protein interactions for RNA: ENST00000374255.6

PTBP3-204, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PTBP3, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-204ENST00000374255 TRIM52Q96A61 297 aa11.35□□□□□ -0.59
PTBP3-204ENST00000374255 CCNB3Q8WWL7 1395 aa11.34□□□□□ -0.59
PTBP3-204ENST00000374255 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
PTBP3-204ENST00000374255 HIRIP3Q9BW71 556 aaPredicted RBP11.34□□□□□ -0.59
PTBP3-204ENST00000374255 ARHGAP35Q9NRY4 1499 aa11.31□□□□□ -0.6
PTBP3-204ENST00000374255 MIER1Q8N108 512 aa11.31□□□□□ -0.6
PTBP3-204ENST00000374255 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-204ENST00000374255 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-204ENST00000374255 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-204ENST00000374255 SIN3AQ96ST3 1273 aa11.3□□□□□ -0.6
PTBP3-204ENST00000374255 POLA1P09884 1462 aaPredicted RBP11.3□□□□□ -0.6
PTBP3-204ENST00000374255 RRP7BPQ9NSQ0 103 aa11.29□□□□□ -0.6
PTBP3-204ENST00000374255 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
PTBP3-204ENST00000374255 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
PTBP3-204ENST00000374255 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
PTBP3-204ENST00000374255 ERICH3Q5RHP9 1530 aa11.28□□□□□ -0.6
PTBP3-204ENST00000374255 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.61
PTBP3-204ENST00000374255 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
PTBP3-204ENST00000374255 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.613e-6■□□□□ 10.9
PTBP3-204ENST00000374255 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
PTBP3-204ENST00000374255 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
PTBP3-204ENST00000374255 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
PTBP3-204ENST00000374255 GAPVD1Q14C86 1478 aa11.23□□□□□ -0.61
PTBP3-204ENST00000374255 PHLDB1Q86UU1 1377 aa11.22□□□□□ -0.61
PTBP3-204ENST00000374255 DHX57Q6P158 1386 aaKnown RBP11.21□□□□□ -0.62
PTBP3-204ENST00000374255 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.62
PTBP3-204ENST00000374255 ZNF326Q5BKZ1 582 aaKnown RBP11.2□□□□□ -0.62
PTBP3-204ENST00000374255 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
PTBP3-204ENST00000374255 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
PTBP3-204ENST00000374255 CDK11AQ9UQ88 783 aaPredicted RBP11.16□□□□□ -0.62
PTBP3-204ENST00000374255 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
PTBP3-204ENST00000374255 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
PTBP3-204ENST00000374255 ABCA10Q8WWZ4 1543 aa11.15□□□□□ -0.62
PTBP3-204ENST00000374255 SETD5Q9C0A6 1442 aa11.15□□□□□ -0.62
PTBP3-204ENST00000374255 FOXD1Q16676 465 aa11.15□□□□□ -0.63
PTBP3-204ENST00000374255 MYT1LQ9UL68 1186 aa11.15□□□□□ -0.63
PTBP3-204ENST00000374255 LRRC9Q6ZRR7 1453 aa11.14□□□□□ -0.63
PTBP3-204ENST00000374255 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
PTBP3-204ENST00000374255 KCNA4P22459 653 aa11.11□□□□□ -0.63
PTBP3-204ENST00000374255 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
PTBP3-204ENST00000374255 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
PTBP3-204ENST00000374255 CLSPNQ9HAW4 1339 aa11.09□□□□□ -0.63
PTBP3-204ENST00000374255 CFDP1Q9UEE9 299 aaPredicted RBP11.09□□□□□ -0.63
PTBP3-204ENST00000374255 KCNH8Q96L42 1107 aa11.09□□□□□ -0.63
PTBP3-204ENST00000374255 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
PTBP3-204ENST00000374255 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.64
PTBP3-204ENST00000374255 ZNF608Q9ULD9 1512 aaPredicted RBP11.07□□□□□ -0.64
PTBP3-204ENST00000374255 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
PTBP3-204ENST00000374255 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
PTBP3-204ENST00000374255 CASKIN1Q8WXD9 1431 aa11.06□□□□□ -0.64
PTBP3-204ENST00000374255 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
PTBP3-204ENST00000374255 JPH4Q96JJ6 628 aa11.06□□□□□ -0.64
PTBP3-204ENST00000374255 MRC2Q9UBG0 1479 aa11.05□□□□□ -0.64
PTBP3-204ENST00000374255 BCANQ96GW7 911 aa11.05□□□□□ -0.64
PTBP3-204ENST00000374255 ANP32CO43423 234 aa11.04□□□□□ -0.64
PTBP3-204ENST00000374255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.645e-8■□□□□ 10.5
PTBP3-204ENST00000374255 FGD6Q6ZV73 1430 aa11.03□□□□□ -0.64
PTBP3-204ENST00000374255 GRIN2BQ13224 1484 aa11.02□□□□□ -0.65
PTBP3-204ENST00000374255 FYCO1Q9BQS8 1478 aa11.02□□□□□ -0.65
PTBP3-204ENST00000374255 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
PTBP3-204ENST00000374255 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
PTBP3-204ENST00000374255 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
PTBP3-204ENST00000374255 TSPY4P0CV99 314 aa11□□□□□ -0.65
PTBP3-204ENST00000374255 TSPY10P0CW01 314 aa11□□□□□ -0.65
PTBP3-204ENST00000374255 SNAPC4Q5SXM2 1469 aa11□□□□□ -0.65
PTBP3-204ENST00000374255 PRDM2Q13029 1718 aa10.99□□□□□ -0.65
PTBP3-204ENST00000374255 CDK13Q14004 1512 aaKnown RBP10.98□□□□□ -0.65
PTBP3-204ENST00000374255 EFCAB5A4FU69 1503 aa10.98□□□□□ -0.65
PTBP3-204ENST00000374255 MYOM3Q5VTT5 1437 aa10.98□□□□□ -0.65
PTBP3-204ENST00000374255 SENP3-EIF4A1A0A087X0R7 540 aa10.98□□□□□ -0.65
PTBP3-204ENST00000374255 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
PTBP3-204ENST00000374255 CUL7Q14999 1698 aa10.97□□□□□ -0.65
PTBP3-204ENST00000374255 MPHOSPH9Q99550 1183 aa10.97□□□□□ -0.65
PTBP3-204ENST00000374255 CCDC18Q5T9S5 1454 aa10.97□□□□□ -0.65
PTBP3-204ENST00000374255 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
PTBP3-204ENST00000374255 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.65
PTBP3-204ENST00000374255 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.66
PTBP3-204ENST00000374255 NEFLP07196 543 aa10.95□□□□□ -0.66
PTBP3-204ENST00000374255 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
PTBP3-204ENST00000374255 CARMIL2Q6F5E8 1435 aa10.94□□□□□ -0.66
PTBP3-204ENST00000374255 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.668e-6■□□□□ 8.6
PTBP3-204ENST00000374255 RGL3Q3MIN7 710 aa10.94□□□□□ -0.66
PTBP3-204ENST00000374255 PRKCSHP14314 528 aaPredicted RBP10.93□□□□□ -0.66
PTBP3-204ENST00000374255 EIF4G2P78344 907 aaKnown RBP eCLIP10.92□□□□□ -0.663e-6■■■□□ 14.7
PTBP3-204ENST00000374255 L3MBTL2Q969R5 705 aa10.92□□□□□ -0.66
PTBP3-204ENST00000374255 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
PTBP3-204ENST00000374255 IQGAP2Q13576 1575 aa10.92□□□□□ -0.66
PTBP3-204ENST00000374255 PTPRKQ15262 1439 aa10.91□□□□□ -0.66
PTBP3-204ENST00000374255 PKD2Q13563 968 aa10.91□□□□□ -0.66
PTBP3-204ENST00000374255 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
PTBP3-204ENST00000374255 EPRSP07814 1512 aaKnown RBP10.9□□□□□ -0.66
PTBP3-204ENST00000374255 HSPA5P11021 654 aaKnown RBP10.9□□□□□ -0.67
PTBP3-204ENST00000374255 HNRNPUQ00839 825 aaKnown RBP eCLIP10.9□□□□□ -0.67
PTBP3-204ENST00000374255 PLB1Q6P1J6 1458 aa10.89□□□□□ -0.67
PTBP3-204ENST00000374255 SENP3Q9H4L4 574 aaPredicted RBP10.88□□□□□ -0.67
PTBP3-204ENST00000374255 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
PTBP3-204ENST00000374255 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
PTBP3-204ENST00000374255 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
PTBP3-204ENST00000374255 GRIN2AQ12879 1464 aa10.87□□□□□ -0.67
PTBP3-204ENST00000374255 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms