RNA–Protein interactions for RNA: ENST00000372042.5

CHRDL1-201, Transcript of chordin like 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CHRDL1, Length 1,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1-201ENST00000372042 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
CHRDL1-201ENST00000372042 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
CHRDL1-201ENST00000372042 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
CHRDL1-201ENST00000372042 CFTRP13569 1480 aa12.68□□□□□ -0.38
CHRDL1-201ENST00000372042 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
CHRDL1-201ENST00000372042 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
CHRDL1-201ENST00000372042 FGD1P98174 961 aa12.65□□□□□ -0.38
CHRDL1-201ENST00000372042 HSP90B1P14625 803 aaKnown RBP12.64□□□□□ -0.39
CHRDL1-201ENST00000372042 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
CHRDL1-201ENST00000372042 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
CHRDL1-201ENST00000372042 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
CHRDL1-201ENST00000372042 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
CHRDL1-201ENST00000372042 OSCARQ8IYS5 282 aa12.58□□□□□ -0.39
CHRDL1-201ENST00000372042 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.39
CHRDL1-201ENST00000372042 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
CHRDL1-201ENST00000372042 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
CHRDL1-201ENST00000372042 ZNF326Q5BKZ1 582 aaKnown RBP12.5□□□□□ -0.41
CHRDL1-201ENST00000372042 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
CHRDL1-201ENST00000372042 RSPH4AQ5TD94 716 aa12.47□□□□□ -0.41
CHRDL1-201ENST00000372042 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHRDL1-201ENST00000372042 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
CHRDL1-201ENST00000372042 IGSF3O75054 1194 aa12.47□□□□□ -0.41
CHRDL1-201ENST00000372042 TOPBP1Q92547 1522 aa12.46□□□□□ -0.41
CHRDL1-201ENST00000372042 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.42
CHRDL1-201ENST00000372042 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
CHRDL1-201ENST00000372042 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
CHRDL1-201ENST00000372042 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
CHRDL1-201ENST00000372042 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
CHRDL1-201ENST00000372042 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
CHRDL1-201ENST00000372042 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
CHRDL1-201ENST00000372042 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
CHRDL1-201ENST00000372042 ARHGEF11O15085 1522 aa12.38□□□□□ -0.43
CHRDL1-201ENST00000372042 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
CHRDL1-201ENST00000372042 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
CHRDL1-201ENST00000372042 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
CHRDL1-201ENST00000372042 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
CHRDL1-201ENST00000372042 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHRDL1-201ENST00000372042 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
CHRDL1-201ENST00000372042 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
CHRDL1-201ENST00000372042 AAMPQ13685 434 aa12.34□□□□□ -0.43
CHRDL1-201ENST00000372042 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
CHRDL1-201ENST00000372042 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
CHRDL1-201ENST00000372042 CHD1O14646 1710 aa12.32□□□□□ -0.44
CHRDL1-201ENST00000372042 FBLN2P98095 1184 aa12.31□□□□□ -0.44
CHRDL1-201ENST00000372042 CYB5RLQ6IPT4 315 aa12.3□□□□□ -0.44
CHRDL1-201ENST00000372042 CCDC136Q96JN2 1154 aa12.3□□□□□ -0.44
CHRDL1-201ENST00000372042 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
CHRDL1-201ENST00000372042 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
CHRDL1-201ENST00000372042 SOGA1O94964 1423 aa12.28□□□□□ -0.44
CHRDL1-201ENST00000372042 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
CHRDL1-201ENST00000372042 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
CHRDL1-201ENST00000372042 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
CHRDL1-201ENST00000372042 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
CHRDL1-201ENST00000372042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHRDL1-201ENST00000372042 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
CHRDL1-201ENST00000372042 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
CHRDL1-201ENST00000372042 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
CHRDL1-201ENST00000372042 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
CHRDL1-201ENST00000372042 CUX1P39880 1505 aa12.2□□□□□ -0.46
CHRDL1-201ENST00000372042 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
CHRDL1-201ENST00000372042 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
CHRDL1-201ENST00000372042 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
CHRDL1-201ENST00000372042 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
CHRDL1-201ENST00000372042 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
CHRDL1-201ENST00000372042 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
CHRDL1-201ENST00000372042 A0A0U1RQG5 324 aaPredicted RBP12.17□□□□□ -0.46
CHRDL1-201ENST00000372042 ZBTB22O15209 634 aa12.17□□□□□ -0.46
CHRDL1-201ENST00000372042 FKBP8Q14318 412 aa12.16□□□□□ -0.46
CHRDL1-201ENST00000372042 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
CHRDL1-201ENST00000372042 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
CHRDL1-201ENST00000372042 RBM10P98175 930 aaKnown RBP12.13□□□□□ -0.47
CHRDL1-201ENST00000372042 GLIPR1L2Q4G1C9 344 aa12.13□□□□□ -0.47
CHRDL1-201ENST00000372042 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
CHRDL1-201ENST00000372042 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
CHRDL1-201ENST00000372042 PBRM1Q86U86 1689 aa12.12□□□□□ -0.47
CHRDL1-201ENST00000372042 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.1□□□□□ -0.47
CHRDL1-201ENST00000372042 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
CHRDL1-201ENST00000372042 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
CHRDL1-201ENST00000372042 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
CHRDL1-201ENST00000372042 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
CHRDL1-201ENST00000372042 CLSTN1O94985 981 aa12.07□□□□□ -0.48
CHRDL1-201ENST00000372042 ARID3AQ99856 593 aa12.05□□□□□ -0.48
CHRDL1-201ENST00000372042 WRNQ14191 1432 aaPredicted RBP eCLIP12.04□□□□□ -0.48
CHRDL1-201ENST00000372042 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
CHRDL1-201ENST00000372042 GRIN2AQ12879 1464 aa12.02□□□□□ -0.48
CHRDL1-201ENST00000372042 NBR1Q14596 966 aa12.02□□□□□ -0.49
CHRDL1-201ENST00000372042 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
CHRDL1-201ENST00000372042 BRPF3Q9ULD4 1205 aa12.01□□□□□ -0.49
CHRDL1-201ENST00000372042 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
CHRDL1-201ENST00000372042 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
CHRDL1-201ENST00000372042 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHRDL1-201ENST00000372042 NCLP19338 710 aaKnown RBP11.99□□□□□ -0.49
CHRDL1-201ENST00000372042 TOP2BQ02880 1626 aa11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 CEP170Q5SW79 1584 aa11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 NUP160Q12769 1436 aa11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 PSMD1Q99460 953 aa11.98□□□□□ -0.49
CHRDL1-201ENST00000372042 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms