RNA–Protein interactions for RNA: ENST00000371559.8

GRIN1-206, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GRIN1, Length 3,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-206ENST00000371559 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
GRIN1-206ENST00000371559 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
GRIN1-206ENST00000371559 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
GRIN1-206ENST00000371559 PHLDB1Q86UU1 1377 aa20.44■□□□□ 0.86
GRIN1-206ENST00000371559 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
GRIN1-206ENST00000371559 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
GRIN1-206ENST00000371559 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
GRIN1-206ENST00000371559 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
GRIN1-206ENST00000371559 SETD5Q9C0A6 1442 aa20.38■□□□□ 0.85
GRIN1-206ENST00000371559 FKBP8Q14318 412 aa20.37■□□□□ 0.85
GRIN1-206ENST00000371559 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
GRIN1-206ENST00000371559 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
GRIN1-206ENST00000371559 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
GRIN1-206ENST00000371559 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
GRIN1-206ENST00000371559 ANP32CO43423 234 aa20.33■□□□□ 0.84
GRIN1-206ENST00000371559 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.84
GRIN1-206ENST00000371559 NESP48681 1621 aa20.31■□□□□ 0.84
GRIN1-206ENST00000371559 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
GRIN1-206ENST00000371559 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
GRIN1-206ENST00000371559 NEFLP07196 543 aa20.29■□□□□ 0.84
GRIN1-206ENST00000371559 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
GRIN1-206ENST00000371559 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
GRIN1-206ENST00000371559 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
GRIN1-206ENST00000371559 FOXD1Q16676 465 aa20.23■□□□□ 0.83
GRIN1-206ENST00000371559 IRX6P78412 446 aaPredicted RBP20.23■□□□□ 0.83
GRIN1-206ENST00000371559 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
GRIN1-206ENST00000371559 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
GRIN1-206ENST00000371559 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
GRIN1-206ENST00000371559 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
GRIN1-206ENST00000371559 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
GRIN1-206ENST00000371559 MAPKBP1O60336 1514 aa20.14■□□□□ 0.82
GRIN1-206ENST00000371559 FBLN2P98095 1184 aa20.14■□□□□ 0.81
GRIN1-206ENST00000371559 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
GRIN1-206ENST00000371559 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
GRIN1-206ENST00000371559 PCF11O94913 1555 aaKnown RBP20.11■□□□□ 0.81
GRIN1-206ENST00000371559 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
GRIN1-206ENST00000371559 TSHZ2Q9NRE2 1034 aa20.1■□□□□ 0.81
GRIN1-206ENST00000371559 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
GRIN1-206ENST00000371559 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
GRIN1-206ENST00000371559 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
GRIN1-206ENST00000371559 FGD6Q6ZV73 1430 aa20.03■□□□□ 0.8
GRIN1-206ENST00000371559 FMN1Q68DA7 1419 aa20.02■□□□□ 0.79
GRIN1-206ENST00000371559 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
GRIN1-206ENST00000371559 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
GRIN1-206ENST00000371559 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
GRIN1-206ENST00000371559 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
GRIN1-206ENST00000371559 TIMELESSQ9UNS1 1208 aa19.94■□□□□ 0.78
GRIN1-206ENST00000371559 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
GRIN1-206ENST00000371559 EIF4G2P78344 907 aaKnown RBP eCLIP19.93■□□□□ 0.78
GRIN1-206ENST00000371559 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
GRIN1-206ENST00000371559 FYCO1Q9BQS8 1478 aa19.93■□□□□ 0.78
GRIN1-206ENST00000371559 SLC4A1APQ9BWU0 796 aaKnown RBP19.93■□□□□ 0.78
GRIN1-206ENST00000371559 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
GRIN1-206ENST00000371559 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
GRIN1-206ENST00000371559 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
GRIN1-206ENST00000371559 MYT1Q01538 1121 aa19.92■□□□□ 0.78
GRIN1-206ENST00000371559 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
GRIN1-206ENST00000371559 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
GRIN1-206ENST00000371559 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
GRIN1-206ENST00000371559 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
GRIN1-206ENST00000371559 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
GRIN1-206ENST00000371559 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
GRIN1-206ENST00000371559 CCDC184Q52MB2 194 aa19.87■□□□□ 0.77
GRIN1-206ENST00000371559 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
GRIN1-206ENST00000371559 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
GRIN1-206ENST00000371559 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
GRIN1-206ENST00000371559 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
GRIN1-206ENST00000371559 NAIPQ13075 1403 aa19.84■□□□□ 0.77
GRIN1-206ENST00000371559 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.77
GRIN1-206ENST00000371559 KDM2AQ9Y2K7 1162 aa19.82■□□□□ 0.76
GRIN1-206ENST00000371559 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
GRIN1-206ENST00000371559 RBM19Q9Y4C8 960 aaKnown RBP19.8■□□□□ 0.76
GRIN1-206ENST00000371559 C11orf95C9JLR9 678 aaPredicted RBP19.79■□□□□ 0.76
GRIN1-206ENST00000371559 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
GRIN1-206ENST00000371559 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
GRIN1-206ENST00000371559 CFDP1Q9UEE9 299 aaPredicted RBP19.77■□□□□ 0.76
GRIN1-206ENST00000371559 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.76
GRIN1-206ENST00000371559 CDK13Q14004 1512 aaKnown RBP19.76■□□□□ 0.75
GRIN1-206ENST00000371559 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
GRIN1-206ENST00000371559 SNAPC4Q5SXM2 1469 aa19.75■□□□□ 0.75
GRIN1-206ENST00000371559 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
GRIN1-206ENST00000371559 CFAP43Q8NDM7 1665 aa19.74■□□□□ 0.75
GRIN1-206ENST00000371559 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
GRIN1-206ENST00000371559 PRDM2Q13029 1718 aa19.72■□□□□ 0.75
GRIN1-206ENST00000371559 B4GALNT3Q6L9W6 998 aa19.72■□□□□ 0.75
GRIN1-206ENST00000371559 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
GRIN1-206ENST00000371559 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
GRIN1-206ENST00000371559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.68■□□□□ 0.74
GRIN1-206ENST00000371559 CUL7Q14999 1698 aa19.67■□□□□ 0.74
GRIN1-206ENST00000371559 PKD2Q13563 968 aa19.66■□□□□ 0.74
GRIN1-206ENST00000371559 PRKRIP1Q9H875 184 aaPredicted RBP19.65■□□□□ 0.74
GRIN1-206ENST00000371559 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
GRIN1-206ENST00000371559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.74
GRIN1-206ENST00000371559 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
GRIN1-206ENST00000371559 CTTNBP2Q8WZ74 1663 aa19.64■□□□□ 0.73
GRIN1-206ENST00000371559 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
GRIN1-206ENST00000371559 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
GRIN1-206ENST00000371559 SUPT6HQ7KZ85 1726 aaKnown RBP19.61■□□□□ 0.73
GRIN1-206ENST00000371559 EHBP1L1Q8N3D4 1523 aa19.6■□□□□ 0.73
GRIN1-206ENST00000371559 KIF7Q2M1P5 1343 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms