RNA–Protein interactions for RNA: ENST00000371475.8

NSMF-206, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NSMF, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-206ENST00000371475 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
NSMF-206ENST00000371475 FAM50AQ14320 339 aaKnown RBP28.84■■■□□ 2.21
NSMF-206ENST00000371475 BCANQ96GW7 911 aa28.82■■■□□ 2.2
NSMF-206ENST00000371475 DHX57Q6P158 1386 aaKnown RBP28.8■■■□□ 2.2
NSMF-206ENST00000371475 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
NSMF-206ENST00000371475 CCNB3Q8WWL7 1395 aa28.74■■■□□ 2.19
NSMF-206ENST00000371475 FHOD3Q2V2M9 1422 aa28.65■■■□□ 2.18
NSMF-206ENST00000371475 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
NSMF-206ENST00000371475 RBM19Q9Y4C8 960 aaKnown RBP28.61■■■□□ 2.17
NSMF-206ENST00000371475 RRBP1Q9P2E9 1410 aaKnown RBP28.6■■■□□ 2.17
NSMF-206ENST00000371475 PHLDB1Q86UU1 1377 aa28.58■■■□□ 2.17
NSMF-206ENST00000371475 SIN3AQ96ST3 1273 aa28.56■■■□□ 2.16
NSMF-206ENST00000371475 RAB3GAP2Q9H2M9 1393 aa28.56■■■□□ 2.16
NSMF-206ENST00000371475 ARID3CA6NKF2 412 aa28.56■■■□□ 2.16
NSMF-206ENST00000371475 POLA1P09884 1462 aaPredicted RBP28.56■■■□□ 2.16
NSMF-206ENST00000371475 PRDM2Q13029 1718 aa28.54■■■□□ 2.16
NSMF-206ENST00000371475 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
NSMF-206ENST00000371475 FKBP8Q14318 412 aa28.5■■■□□ 2.15
NSMF-206ENST00000371475 HIRIP3Q9BW71 556 aaPredicted RBP28.49■■■□□ 2.15
NSMF-206ENST00000371475 ERICH6Q7L0X2 663 aa28.48■■■□□ 2.15
NSMF-206ENST00000371475 TIAM1Q13009 1591 aa28.45■■■□□ 2.15
NSMF-206ENST00000371475 LRRC9Q6ZRR7 1453 aa28.45■■■□□ 2.14
NSMF-206ENST00000371475 MSH5O43196 834 aa28.39■■■□□ 2.14
NSMF-206ENST00000371475 PCF11O94913 1555 aaKnown RBP28.39■■■□□ 2.14
NSMF-206ENST00000371475 DNMBPQ6XZF7 1577 aa28.39■■■□□ 2.13
NSMF-206ENST00000371475 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
NSMF-206ENST00000371475 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
NSMF-206ENST00000371475 ABCA10Q8WWZ4 1543 aa28.34■■■□□ 2.13
NSMF-206ENST00000371475 SETD5Q9C0A6 1442 aa28.32■■■□□ 2.12
NSMF-206ENST00000371475 KCNH8Q96L42 1107 aa28.32■■■□□ 2.12
NSMF-206ENST00000371475 MTUS2Q5JR59 1369 aa28.26■■■□□ 2.11
NSMF-206ENST00000371475 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
NSMF-206ENST00000371475 DDX10Q13206 875 aaKnown RBP28.23■■■□□ 2.11
NSMF-206ENST00000371475 ANO8Q9HCE9 1232 aaPredicted RBP28.22■■■□□ 2.11
NSMF-206ENST00000371475 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
NSMF-206ENST00000371475 NEFLP07196 543 aa28.21■■■□□ 2.11
NSMF-206ENST00000371475 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.1
NSMF-206ENST00000371475 RRP7BPQ9NSQ0 103 aa28.14■■■□□ 2.1
NSMF-206ENST00000371475 CASKIN1Q8WXD9 1431 aa28.13■■■□□ 2.09
NSMF-206ENST00000371475 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
NSMF-206ENST00000371475 AQRO60306 1485 aaKnown RBP eCLIP28.13■■■□□ 2.094e-9■■■■■ 45.8
NSMF-206ENST00000371475 DEKP35659 375 aaKnown RBP28.11■■■□□ 2.09
NSMF-206ENST00000371475 MAP3K1Q13233 1512 aa28.1■■■□□ 2.09
NSMF-206ENST00000371475 FYCO1Q9BQS8 1478 aa28.09■■■□□ 2.09
NSMF-206ENST00000371475 FMN1Q68DA7 1419 aa28.07■■■□□ 2.08
NSMF-206ENST00000371475 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
NSMF-206ENST00000371475 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
NSMF-206ENST00000371475 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
NSMF-206ENST00000371475 KIF21AQ7Z4S6 1674 aa28.04■■■□□ 2.08
NSMF-206ENST00000371475 CFAP43Q8NDM7 1665 aa28.04■■■□□ 2.08
NSMF-206ENST00000371475 FGD6Q6ZV73 1430 aa28.03■■■□□ 2.08
NSMF-206ENST00000371475 CUL7Q14999 1698 aa28.03■■■□□ 2.08
NSMF-206ENST00000371475 CTTNBP2Q8WZ74 1663 aa28.02■■■□□ 2.08
NSMF-206ENST00000371475 TRIM52Q96A61 297 aa28.01■■■□□ 2.07
NSMF-206ENST00000371475 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
NSMF-206ENST00000371475 SNAPC4Q5SXM2 1469 aa27.99■■■□□ 2.07
NSMF-206ENST00000371475 FBLN2P98095 1184 aa27.97■■■□□ 2.07
NSMF-206ENST00000371475 FANCIQ9NVI1 1328 aa27.96■■■□□ 2.07
NSMF-206ENST00000371475 FOXD1Q16676 465 aa27.94■■■□□ 2.06
NSMF-206ENST00000371475 NCOA2Q15596 1464 aa27.94■■■□□ 2.06
NSMF-206ENST00000371475 PPP1R15AO75807 674 aaPredicted RBP27.93■■■□□ 2.06
NSMF-206ENST00000371475 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
NSMF-206ENST00000371475 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
NSMF-206ENST00000371475 MYT1LQ9UL68 1186 aa27.91■■■□□ 2.06
NSMF-206ENST00000371475 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.05
NSMF-206ENST00000371475 SALL2Q9Y467 1007 aaPredicted RBP27.88■■■□□ 2.05
NSMF-206ENST00000371475 LRRIQ1Q96JM4 1722 aa27.86■■■□□ 2.05
NSMF-206ENST00000371475 CDK11AQ9UQ88 783 aaPredicted RBP27.85■■■□□ 2.05
NSMF-206ENST00000371475 ZNF608Q9ULD9 1512 aaPredicted RBP27.85■■■□□ 2.05
NSMF-206ENST00000371475 MYOM3Q5VTT5 1437 aa27.83■■■□□ 2.05
NSMF-206ENST00000371475 GRIN2BQ13224 1484 aa27.82■■■□□ 2.04
NSMF-206ENST00000371475 CDK13Q14004 1512 aaKnown RBP27.82■■■□□ 2.04
NSMF-206ENST00000371475 MAGI3Q5TCQ9 1506 aa27.82■■■□□ 2.04
NSMF-206ENST00000371475 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
NSMF-206ENST00000371475 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
NSMF-206ENST00000371475 NBR1Q14596 966 aa27.78■■■□□ 2.04
NSMF-206ENST00000371475 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
NSMF-206ENST00000371475 SAMD9Q5K651 1589 aa27.77■■■□□ 2.04
NSMF-206ENST00000371475 NAIPQ13075 1403 aa27.77■■■□□ 2.04
NSMF-206ENST00000371475 ZNF777Q9ULD5 760 aaPredicted RBP27.74■■■□□ 2.03
NSMF-206ENST00000371475 IRX6P78412 446 aaPredicted RBP27.72■■■□□ 2.03
NSMF-206ENST00000371475 HFM1A2PYH4 1435 aa27.72■■■□□ 2.03
NSMF-206ENST00000371475 CNGB1Q14028 1251 aaPredicted RBP27.71■■■□□ 2.03
NSMF-206ENST00000371475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.69■■■□□ 2.025e-8■■■■□ 19.6
NSMF-206ENST00000371475 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
NSMF-206ENST00000371475 ANP32CO43423 234 aa27.68■■■□□ 2.02
NSMF-206ENST00000371475 PTPN23Q9H3S7 1636 aa27.68■■■□□ 2.02
NSMF-206ENST00000371475 SUPT6HQ7KZ85 1726 aaKnown RBP27.66■■■□□ 2.02
NSMF-206ENST00000371475 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
NSMF-206ENST00000371475 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
NSMF-206ENST00000371475 EPRSP07814 1512 aaKnown RBP27.65■■■□□ 2.02
NSMF-206ENST00000371475 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
NSMF-206ENST00000371475 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
NSMF-206ENST00000371475 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
NSMF-206ENST00000371475 TIMELESSQ9UNS1 1208 aa27.62■■■□□ 2.01
NSMF-206ENST00000371475 MPHOSPH9Q99550 1183 aa27.61■■■□□ 2.01
NSMF-206ENST00000371475 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
NSMF-206ENST00000371475 RTN4Q9NQC3 1192 aaKnown RBP27.6■■■□□ 2.01
NSMF-206ENST00000371475 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
NSMF-206ENST00000371475 KDM6BO15054 1643 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms