RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
ATG4C-202ENST00000371118 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
ATG4C-202ENST00000371118 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
ATG4C-202ENST00000371118 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.53
ATG4C-202ENST00000371118 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
ATG4C-202ENST00000371118 GAPVD1Q14C86 1478 aa11.75□□□□□ -0.53
ATG4C-202ENST00000371118 APLP2Q06481 763 aa11.73□□□□□ -0.53
ATG4C-202ENST00000371118 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
ATG4C-202ENST00000371118 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
ATG4C-202ENST00000371118 SYNJ1O43426 1573 aa11.71□□□□□ -0.54
ATG4C-202ENST00000371118 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
ATG4C-202ENST00000371118 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
ATG4C-202ENST00000371118 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
ATG4C-202ENST00000371118 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
ATG4C-202ENST00000371118 RAD54L2Q9Y4B4 1467 aa11.66□□□□□ -0.54
ATG4C-202ENST00000371118 HAX1O00165 279 aa11.65□□□□□ -0.54
ATG4C-202ENST00000371118 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
ATG4C-202ENST00000371118 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
ATG4C-202ENST00000371118 FAM69CQ0P6D2 419 aa11.63□□□□□ -0.55
ATG4C-202ENST00000371118 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
ATG4C-202ENST00000371118 SOGA1O94964 1423 aa11.61□□□□□ -0.55
ATG4C-202ENST00000371118 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
ATG4C-202ENST00000371118 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
ATG4C-202ENST00000371118 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
ATG4C-202ENST00000371118 ERCC6L2Q5T890 1561 aa11.58□□□□□ -0.55
ATG4C-202ENST00000371118 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
ATG4C-202ENST00000371118 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
ATG4C-202ENST00000371118 FBXO41Q8TF61 875 aa11.57□□□□□ -0.56
ATG4C-202ENST00000371118 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
ATG4C-202ENST00000371118 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
ATG4C-202ENST00000371118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
ATG4C-202ENST00000371118 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
ATG4C-202ENST00000371118 KDM6BO15054 1643 aa11.53□□□□□ -0.56
ATG4C-202ENST00000371118 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
ATG4C-202ENST00000371118 HECW2Q9P2P5 1572 aa11.53□□□□□ -0.56
ATG4C-202ENST00000371118 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
ATG4C-202ENST00000371118 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
ATG4C-202ENST00000371118 ADGRL1O94910 1474 aa11.48□□□□□ -0.57
ATG4C-202ENST00000371118 TSPOAP1O95153 1857 aa11.47□□□□□ -0.57
ATG4C-202ENST00000371118 FGD5Q6ZNL6 1462 aa11.47□□□□□ -0.57
ATG4C-202ENST00000371118 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
ATG4C-202ENST00000371118 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
ATG4C-202ENST00000371118 CEP170Q5SW79 1584 aa11.46□□□□□ -0.57
ATG4C-202ENST00000371118 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.57
ATG4C-202ENST00000371118 LHX8Q68G74 356 aa11.46□□□□□ -0.57
ATG4C-202ENST00000371118 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
ATG4C-202ENST00000371118 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
ATG4C-202ENST00000371118 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
ATG4C-202ENST00000371118 SOCS7O14512 581 aa11.41□□□□□ -0.58
ATG4C-202ENST00000371118 ILDR2Q71H61 639 aa11.4□□□□□ -0.58
ATG4C-202ENST00000371118 DIP2BQ9P265 1576 aa11.4□□□□□ -0.58
ATG4C-202ENST00000371118 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
ATG4C-202ENST00000371118 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
ATG4C-202ENST00000371118 EVX2Q03828 476 aa11.37□□□□□ -0.59
ATG4C-202ENST00000371118 DISP3Q9P2K9 1392 aa11.36□□□□□ -0.59
ATG4C-202ENST00000371118 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
ATG4C-202ENST00000371118 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
ATG4C-202ENST00000371118 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
ATG4C-202ENST00000371118 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
ATG4C-202ENST00000371118 SHROOM2Q13796 1616 aa11.33□□□□□ -0.6
ATG4C-202ENST00000371118 CUX1P39880 1505 aa11.33□□□□□ -0.6
ATG4C-202ENST00000371118 NUP160Q12769 1436 aa11.33□□□□□ -0.6
ATG4C-202ENST00000371118 TTBK1Q5TCY1 1321 aaPredicted RBP11.32□□□□□ -0.6
ATG4C-202ENST00000371118 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.6
ATG4C-202ENST00000371118 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
ATG4C-202ENST00000371118 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
ATG4C-202ENST00000371118 POLA2Q14181 598 aa11.26□□□□□ -0.61
ATG4C-202ENST00000371118 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
ATG4C-202ENST00000371118 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
ATG4C-202ENST00000371118 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
ATG4C-202ENST00000371118 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
ATG4C-202ENST00000371118 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
ATG4C-202ENST00000371118 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
ATG4C-202ENST00000371118 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
ATG4C-202ENST00000371118 ASXL2Q76L83 1435 aa11.16□□□□□ -0.62
ATG4C-202ENST00000371118 CERKQ8TCT0 537 aa11.15□□□□□ -0.62
ATG4C-202ENST00000371118 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
ATG4C-202ENST00000371118 PTPRGP23470 1445 aa11.12□□□□□ -0.63
ATG4C-202ENST00000371118 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
ATG4C-202ENST00000371118 RUSC2Q8N2Y8 1516 aa11.11□□□□□ -0.63
ATG4C-202ENST00000371118 GABBR2O75899 941 aa11.1□□□□□ -0.63
ATG4C-202ENST00000371118 HSPA2P54652 639 aa11.1□□□□□ -0.63
ATG4C-202ENST00000371118 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
ATG4C-202ENST00000371118 GLI2P10070 1586 aa11.1□□□□□ -0.63
ATG4C-202ENST00000371118 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
ATG4C-202ENST00000371118 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
ATG4C-202ENST00000371118 ABCC2Q92887 1545 aa11.08□□□□□ -0.64
ATG4C-202ENST00000371118 PTPRMP28827 1452 aa11.07□□□□□ -0.64
ATG4C-202ENST00000371118 KIF21BO75037 1637 aa11.07□□□□□ -0.64
ATG4C-202ENST00000371118 CUL7Q14999 1698 aa11.06□□□□□ -0.64
ATG4C-202ENST00000371118 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
ATG4C-202ENST00000371118 MAP3K4Q9Y6R4 1608 aa11.04□□□□□ -0.64
ATG4C-202ENST00000371118 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
ATG4C-202ENST00000371118 PCF11O94913 1555 aaKnown RBP11.03□□□□□ -0.64
ATG4C-202ENST00000371118 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
ATG4C-202ENST00000371118 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
ATG4C-202ENST00000371118 KCNH8Q96L42 1107 aa11.02□□□□□ -0.65
ATG4C-202ENST00000371118 KIAA0586Q9BVV6 1533 aa11.01□□□□□ -0.65
ATG4C-202ENST00000371118 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
ATG4C-202ENST00000371118 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms