RNA–Protein interactions for RNA: ENST00000370888.5

LRRC1-202, Transcript of leucine rich repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-202ENST00000370888 LRRC9Q6ZRR7 1453 aa28.03■■■□□ 2.08
LRRC1-202ENST00000370888 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
LRRC1-202ENST00000370888 MAPKBP1O60336 1514 aa28■■■□□ 2.07
LRRC1-202ENST00000370888 SUPT16HQ9Y5B9 1047 aaKnown RBP27.99■■■□□ 2.07
LRRC1-202ENST00000370888 HIRIP3Q9BW71 556 aaPredicted RBP27.98■■■□□ 2.07
LRRC1-202ENST00000370888 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
LRRC1-202ENST00000370888 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.07
LRRC1-202ENST00000370888 DDX10Q13206 875 aaKnown RBP27.95■■■□□ 2.06
LRRC1-202ENST00000370888 FHAD1B1AJZ9 1412 aa27.91■■■□□ 2.06
LRRC1-202ENST00000370888 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
LRRC1-202ENST00000370888 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
LRRC1-202ENST00000370888 PCF11O94913 1555 aaKnown RBP27.89■■■□□ 2.05
LRRC1-202ENST00000370888 MAP3K1Q13233 1512 aa27.86■■■□□ 2.05
LRRC1-202ENST00000370888 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
LRRC1-202ENST00000370888 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
LRRC1-202ENST00000370888 NESP48681 1621 aa27.79■■■□□ 2.04
LRRC1-202ENST00000370888 BCANQ96GW7 911 aa27.75■■■□□ 2.03
LRRC1-202ENST00000370888 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
LRRC1-202ENST00000370888 CFAP43Q8NDM7 1665 aa27.7■■■□□ 2.03
LRRC1-202ENST00000370888 TOPBP1Q92547 1522 aa27.7■■■□□ 2.03
LRRC1-202ENST00000370888 ABCA10Q8WWZ4 1543 aa27.67■■■□□ 2.02
LRRC1-202ENST00000370888 CASKIN1Q8WXD9 1431 aa27.67■■■□□ 2.02
LRRC1-202ENST00000370888 PPP1R15AO75807 674 aaPredicted RBP27.67■■■□□ 2.02
LRRC1-202ENST00000370888 FYCO1Q9BQS8 1478 aa27.67■■■□□ 2.02
LRRC1-202ENST00000370888 MTUS2Q5JR59 1369 aa27.66■■■□□ 2.02
LRRC1-202ENST00000370888 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
LRRC1-202ENST00000370888 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
LRRC1-202ENST00000370888 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
LRRC1-202ENST00000370888 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
LRRC1-202ENST00000370888 TONSLQ96HA7 1378 aa27.59■■■□□ 2.01
LRRC1-202ENST00000370888 FKBP8Q14318 412 aa27.58■■■□□ 2.01
LRRC1-202ENST00000370888 EFCAB5A4FU69 1503 aa27.57■■■□□ 2
LRRC1-202ENST00000370888 FMN1Q68DA7 1419 aa27.56■■■□□ 2
LRRC1-202ENST00000370888 PTPRKQ15262 1439 aa27.56■■■□□ 2
LRRC1-202ENST00000370888 ANP32CO43423 234 aa27.55■■■□□ 2
LRRC1-202ENST00000370888 MYT1Q01538 1121 aa27.55■■■□□ 2
LRRC1-202ENST00000370888 TSHZ2Q9NRE2 1034 aa27.55■■■□□ 2
LRRC1-202ENST00000370888 TIMELESSQ9UNS1 1208 aa27.55■■■□□ 2
LRRC1-202ENST00000370888 CCDC18Q5T9S5 1454 aa27.53■■■□□ 2
LRRC1-202ENST00000370888 ARID3CA6NKF2 412 aa27.52■■■□□ 2
LRRC1-202ENST00000370888 CHIC2Q9UKJ5 165 aa27.52■■■□□ 2
LRRC1-202ENST00000370888 AQRO60306 1485 aaKnown RBP eCLIP27.5■■□□□ 1.99
LRRC1-202ENST00000370888 SNAPC4Q5SXM2 1469 aa27.49■■□□□ 1.99
LRRC1-202ENST00000370888 RRP7BPQ9NSQ0 103 aa27.48■■□□□ 1.99
LRRC1-202ENST00000370888 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
LRRC1-202ENST00000370888 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
LRRC1-202ENST00000370888 CUL7Q14999 1698 aa27.47■■□□□ 1.99
LRRC1-202ENST00000370888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.47■■□□□ 1.99
LRRC1-202ENST00000370888 CTTNBP2Q8WZ74 1663 aa27.47■■□□□ 1.99
LRRC1-202ENST00000370888 NCOA2Q15596 1464 aa27.43■■□□□ 1.98
LRRC1-202ENST00000370888 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
LRRC1-202ENST00000370888 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
LRRC1-202ENST00000370888 UACAQ9BZF9 1416 aa27.39■■□□□ 1.98
LRRC1-202ENST00000370888 NAIPQ13075 1403 aa27.38■■□□□ 1.97
LRRC1-202ENST00000370888 MYOM3Q5VTT5 1437 aa27.38■■□□□ 1.97
LRRC1-202ENST00000370888 NEFLP07196 543 aa27.37■■□□□ 1.97
LRRC1-202ENST00000370888 CCER2I3L3R5 266 aa27.36■■□□□ 1.97
LRRC1-202ENST00000370888 PTPN23Q9H3S7 1636 aa27.35■■□□□ 1.97
LRRC1-202ENST00000370888 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
LRRC1-202ENST00000370888 GRIN2BQ13224 1484 aa27.31■■□□□ 1.96
LRRC1-202ENST00000370888 FOXD1Q16676 465 aa27.29■■□□□ 1.96
LRRC1-202ENST00000370888 SAMD9Q5K651 1589 aa27.27■■□□□ 1.96
LRRC1-202ENST00000370888 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
LRRC1-202ENST00000370888 MAGI3Q5TCQ9 1506 aa27.24■■□□□ 1.95
LRRC1-202ENST00000370888 SUPT6HQ7KZ85 1726 aaKnown RBP27.22■■□□□ 1.95
LRRC1-202ENST00000370888 HSPA5P11021 654 aaKnown RBP27.22■■□□□ 1.95
LRRC1-202ENST00000370888 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
LRRC1-202ENST00000370888 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
LRRC1-202ENST00000370888 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
LRRC1-202ENST00000370888 EHBP1L1Q8N3D4 1523 aa27.2■■□□□ 1.94
LRRC1-202ENST00000370888 IRX6P78412 446 aaPredicted RBP27.18■■□□□ 1.94
LRRC1-202ENST00000370888 WASHC2AQ641Q2 1341 aa27.17■■□□□ 1.94
LRRC1-202ENST00000370888 UGGT2Q9NYU1 1516 aa27.16■■□□□ 1.94
LRRC1-202ENST00000370888 MPHOSPH9Q99550 1183 aa27.14■■□□□ 1.94
LRRC1-202ENST00000370888 CDK13Q14004 1512 aaKnown RBP27.13■■□□□ 1.93
LRRC1-202ENST00000370888 KDM5BQ9UGL1 1544 aa27.13■■□□□ 1.93
LRRC1-202ENST00000370888 L3MBTL2Q969R5 705 aa27.11■■□□□ 1.93
LRRC1-202ENST00000370888 KDM6BO15054 1643 aa27.1■■□□□ 1.93
LRRC1-202ENST00000370888 EIF4G2P78344 907 aaKnown RBP eCLIP27.09■■□□□ 1.93
LRRC1-202ENST00000370888 DENND4BO75064 1496 aaPredicted RBP27.08■■□□□ 1.93
LRRC1-202ENST00000370888 THOC2Q8NI27 1593 aaKnown RBP27.08■■□□□ 1.93
LRRC1-202ENST00000370888 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
LRRC1-202ENST00000370888 EPRSP07814 1512 aaKnown RBP27.07■■□□□ 1.92
LRRC1-202ENST00000370888 CCDC184Q52MB2 194 aa27.06■■□□□ 1.92
LRRC1-202ENST00000370888 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
LRRC1-202ENST00000370888 ARHGEF11O15085 1522 aa27.04■■□□□ 1.92
LRRC1-202ENST00000370888 CNGB1Q14028 1251 aaPredicted RBP27.04■■□□□ 1.92
LRRC1-202ENST00000370888 C11orf95C9JLR9 678 aaPredicted RBP27.04■■□□□ 1.92
LRRC1-202ENST00000370888 RBM19Q9Y4C8 960 aaKnown RBP27.03■■□□□ 1.92
LRRC1-202ENST00000370888 ANP32EQ9BTT0 268 aa27.03■■□□□ 1.92
LRRC1-202ENST00000370888 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
LRRC1-202ENST00000370888 HECW1Q76N89 1606 aa27■■□□□ 1.91
LRRC1-202ENST00000370888 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
LRRC1-202ENST00000370888 FAM9BQ8IZU0 186 aa26.99■■□□□ 1.91
LRRC1-202ENST00000370888 IQGAP2Q13576 1575 aa26.98■■□□□ 1.91
LRRC1-202ENST00000370888 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
LRRC1-202ENST00000370888 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.9
LRRC1-202ENST00000370888 GCC2Q8IWJ2 1684 aa26.91■■□□□ 1.9
LRRC1-202ENST00000370888 MIA2Q96PC5 1412 aa26.9■■□□□ 1.9
LRRC1-202ENST00000370888 POLR3GLQ9BT43 218 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms