RNA–Protein interactions for RNA: ENST00000370792.7

USP33-202, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 1 (best) BASIC

Gene USP33, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-202ENST00000370792 LRRC9Q6ZRR7 1453 aa20.71■□□□□ 0.91
USP33-202ENST00000370792 MAPKBP1O60336 1514 aa20.7■□□□□ 0.9
USP33-202ENST00000370792 SIN3AQ96ST3 1273 aa20.68■□□□□ 0.9
USP33-202ENST00000370792 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
USP33-202ENST00000370792 FHOD3Q2V2M9 1422 aa20.66■□□□□ 0.9
USP33-202ENST00000370792 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
USP33-202ENST00000370792 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
USP33-202ENST00000370792 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
USP33-202ENST00000370792 PCF11O94913 1555 aaKnown RBP20.65■□□□□ 0.9
USP33-202ENST00000370792 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
USP33-202ENST00000370792 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
USP33-202ENST00000370792 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
USP33-202ENST00000370792 NESP48681 1621 aa20.57■□□□□ 0.88
USP33-202ENST00000370792 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
USP33-202ENST00000370792 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
USP33-202ENST00000370792 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
USP33-202ENST00000370792 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
USP33-202ENST00000370792 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
USP33-202ENST00000370792 CFAP43Q8NDM7 1665 aa20.54■□□□□ 0.88
USP33-202ENST00000370792 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
USP33-202ENST00000370792 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
USP33-202ENST00000370792 ABCA10Q8WWZ4 1543 aa20.5■□□□□ 0.87
USP33-202ENST00000370792 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
USP33-202ENST00000370792 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
USP33-202ENST00000370792 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
USP33-202ENST00000370792 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
USP33-202ENST00000370792 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
USP33-202ENST00000370792 FGD6Q6ZV73 1430 aa20.39■□□□□ 0.85
USP33-202ENST00000370792 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
USP33-202ENST00000370792 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
USP33-202ENST00000370792 CUL7Q14999 1698 aa20.37■□□□□ 0.85
USP33-202ENST00000370792 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
USP33-202ENST00000370792 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
USP33-202ENST00000370792 BCANQ96GW7 911 aa20.36■□□□□ 0.85
USP33-202ENST00000370792 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
USP33-202ENST00000370792 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■□□□ 13.6
USP33-202ENST00000370792 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
USP33-202ENST00000370792 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
USP33-202ENST00000370792 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
USP33-202ENST00000370792 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
USP33-202ENST00000370792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.31■□□□□ 0.84
USP33-202ENST00000370792 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
USP33-202ENST00000370792 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
USP33-202ENST00000370792 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
USP33-202ENST00000370792 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
USP33-202ENST00000370792 LRRIQ1Q96JM4 1722 aa20.26■□□□□ 0.83
USP33-202ENST00000370792 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
USP33-202ENST00000370792 FKBP8Q14318 412 aa20.25■□□□□ 0.83
USP33-202ENST00000370792 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
USP33-202ENST00000370792 ANP32CO43423 234 aa20.25■□□□□ 0.83
USP33-202ENST00000370792 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
USP33-202ENST00000370792 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
USP33-202ENST00000370792 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
USP33-202ENST00000370792 PTPN23Q9H3S7 1636 aa20.23■□□□□ 0.83
USP33-202ENST00000370792 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
USP33-202ENST00000370792 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
USP33-202ENST00000370792 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
USP33-202ENST00000370792 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
USP33-202ENST00000370792 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
USP33-202ENST00000370792 NAIPQ13075 1403 aa20.22■□□□□ 0.83
USP33-202ENST00000370792 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
USP33-202ENST00000370792 MAGI3Q5TCQ9 1506 aa20.17■□□□□ 0.82
USP33-202ENST00000370792 SUPT6HQ7KZ85 1726 aaKnown RBP20.15■□□□□ 0.82
USP33-202ENST00000370792 CCER2I3L3R5 266 aa20.14■□□□□ 0.82
USP33-202ENST00000370792 EHBP1L1Q8N3D4 1523 aa20.14■□□□□ 0.81
USP33-202ENST00000370792 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
USP33-202ENST00000370792 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
USP33-202ENST00000370792 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
USP33-202ENST00000370792 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
USP33-202ENST00000370792 FOXD1Q16676 465 aa20.09■□□□□ 0.81
USP33-202ENST00000370792 NEFLP07196 543 aa20.08■□□□□ 0.8
USP33-202ENST00000370792 KDM5BQ9UGL1 1544 aa20.08■□□□□ 0.8
USP33-202ENST00000370792 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
USP33-202ENST00000370792 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
USP33-202ENST00000370792 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
USP33-202ENST00000370792 KDM6BO15054 1643 aa20.05■□□□□ 0.8
USP33-202ENST00000370792 ARHGEF11O15085 1522 aa20.04■□□□□ 0.8
USP33-202ENST00000370792 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
USP33-202ENST00000370792 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
USP33-202ENST00000370792 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.79
USP33-202ENST00000370792 WASHC2AQ641Q2 1341 aa20.01■□□□□ 0.79
USP33-202ENST00000370792 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
USP33-202ENST00000370792 HECW1Q76N89 1606 aa20■□□□□ 0.79
USP33-202ENST00000370792 MPHOSPH9Q99550 1183 aa19.99■□□□□ 0.79
USP33-202ENST00000370792 TCOF1Q13428 1488 aaKnown RBP19.99■□□□□ 0.79
USP33-202ENST00000370792 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
USP33-202ENST00000370792 L3MBTL2Q969R5 705 aa19.96■□□□□ 0.79
USP33-202ENST00000370792 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
USP33-202ENST00000370792 IRX6P78412 446 aaPredicted RBP19.96■□□□□ 0.79
USP33-202ENST00000370792 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
USP33-202ENST00000370792 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
USP33-202ENST00000370792 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
USP33-202ENST00000370792 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
USP33-202ENST00000370792 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
USP33-202ENST00000370792 WDR62O43379 1518 aa19.92■□□□□ 0.78
USP33-202ENST00000370792 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
USP33-202ENST00000370792 MIA2Q96PC5 1412 aa19.89■□□□□ 0.77
USP33-202ENST00000370792 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
USP33-202ENST00000370792 NBPF8Q3BBV2 869 aa19.87■□□□□ 0.77
USP33-202ENST00000370792 AKNAQ7Z591 1439 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms