RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 CCNB3Q8WWL7 1395 aa10.1□□□□□ -0.79
TGFBR3-202ENST00000370399 FHOD3Q2V2M9 1422 aa10.1□□□□□ -0.79
TGFBR3-202ENST00000370399 DDX10Q13206 875 aaKnown RBP10.09□□□□□ -0.79
TGFBR3-202ENST00000370399 CC2D2AQ9P2K1 1620 aa10.09□□□□□ -0.79
TGFBR3-202ENST00000370399 TONSLQ96HA7 1378 aa10.08□□□□□ -0.8
TGFBR3-202ENST00000370399 GTF3C3Q9Y5Q9 886 aa10.08□□□□□ -0.8
TGFBR3-202ENST00000370399 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
TGFBR3-202ENST00000370399 MIER1Q8N108 512 aa10.07□□□□□ -0.8
TGFBR3-202ENST00000370399 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
TGFBR3-202ENST00000370399 NEFLP07196 543 aa10.07□□□□□ -0.8
TGFBR3-202ENST00000370399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.86e-8■■□□□ 12.3
TGFBR3-202ENST00000370399 CFDP1Q9UEE9 299 aaPredicted RBP10.05□□□□□ -0.8
TGFBR3-202ENST00000370399 TSPY4P0CV99 314 aa10.04□□□□□ -0.8
TGFBR3-202ENST00000370399 TSPY10P0CW01 314 aa10.04□□□□□ -0.8
TGFBR3-202ENST00000370399 CUX1P39880 1505 aa10.04□□□□□ -0.8
TGFBR3-202ENST00000370399 ANP32CO43423 234 aa10.04□□□□□ -0.8
TGFBR3-202ENST00000370399 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
TGFBR3-202ENST00000370399 SLC4A1APQ9BWU0 796 aaKnown RBP10.02□□□□□ -0.8
TGFBR3-202ENST00000370399 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
TGFBR3-202ENST00000370399 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.814e-7■■■■□ 23.2
TGFBR3-202ENST00000370399 KDM2AQ9Y2K7 1162 aa10□□□□□ -0.81
TGFBR3-202ENST00000370399 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
TGFBR3-202ENST00000370399 KIF21BO75037 1637 aa9.98□□□□□ -0.81
TGFBR3-202ENST00000370399 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
TGFBR3-202ENST00000370399 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
TGFBR3-202ENST00000370399 TOP2BQ02880 1626 aa9.98□□□□□ -0.81
TGFBR3-202ENST00000370399 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
TGFBR3-202ENST00000370399 FOXD1Q16676 465 aa9.97□□□□□ -0.81
TGFBR3-202ENST00000370399 BCANQ96GW7 911 aa9.97□□□□□ -0.81
TGFBR3-202ENST00000370399 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
TGFBR3-202ENST00000370399 PRXQ9BXM0 1461 aa9.97□□□□□ -0.81
TGFBR3-202ENST00000370399 RAB3GAP2Q9H2M9 1393 aa9.97□□□□□ -0.81
TGFBR3-202ENST00000370399 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
TGFBR3-202ENST00000370399 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
TGFBR3-202ENST00000370399 ARHGAP35Q9NRY4 1499 aa9.95□□□□□ -0.82
TGFBR3-202ENST00000370399 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
TGFBR3-202ENST00000370399 RGL3Q3MIN7 710 aa9.94□□□□□ -0.82
TGFBR3-202ENST00000370399 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
TGFBR3-202ENST00000370399 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
TGFBR3-202ENST00000370399 SENP3Q9H4L4 574 aaPredicted RBP9.92□□□□□ -0.82
TGFBR3-202ENST00000370399 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.82
TGFBR3-202ENST00000370399 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
TGFBR3-202ENST00000370399 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
TGFBR3-202ENST00000370399 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
TGFBR3-202ENST00000370399 EIF4G2P78344 907 aaKnown RBP eCLIP9.88□□□□□ -0.836e-7■■■■■ 31.9
TGFBR3-202ENST00000370399 CARMIL2Q6F5E8 1435 aa9.87□□□□□ -0.83
TGFBR3-202ENST00000370399 FAM9BQ8IZU0 186 aa9.87□□□□□ -0.83
TGFBR3-202ENST00000370399 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
TGFBR3-202ENST00000370399 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
TGFBR3-202ENST00000370399 ZNF644Q9H582 1327 aaPredicted RBP9.86□□□□□ -0.83
TGFBR3-202ENST00000370399 HNRNPMP52272 730 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■■■□□ 17.2
TGFBR3-202ENST00000370399 HNRNPUQ00839 825 aaKnown RBP eCLIP9.85□□□□□ -0.835e-6■□□□□ 10.8
TGFBR3-202ENST00000370399 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
TGFBR3-202ENST00000370399 MPHOSPH9Q99550 1183 aa9.84□□□□□ -0.83
TGFBR3-202ENST00000370399 SALL2Q9Y467 1007 aaPredicted RBP9.83□□□□□ -0.84
TGFBR3-202ENST00000370399 PKD2Q13563 968 aa9.83□□□□□ -0.84
TGFBR3-202ENST00000370399 LRRC9Q6ZRR7 1453 aa9.82□□□□□ -0.84
TGFBR3-202ENST00000370399 DNMBPQ6XZF7 1577 aa9.82□□□□□ -0.84
TGFBR3-202ENST00000370399 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
TGFBR3-202ENST00000370399 PPP1R15AO75807 674 aaPredicted RBP9.81□□□□□ -0.84
TGFBR3-202ENST00000370399 GRIN2BQ13224 1484 aa9.8□□□□□ -0.84
TGFBR3-202ENST00000370399 ABCA10Q8WWZ4 1543 aa9.8□□□□□ -0.84
TGFBR3-202ENST00000370399 MRC2Q9UBG0 1479 aa9.8□□□□□ -0.84
TGFBR3-202ENST00000370399 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
TGFBR3-202ENST00000370399 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
TGFBR3-202ENST00000370399 PTPRGP23470 1445 aa9.79□□□□□ -0.84
TGFBR3-202ENST00000370399 CARD11Q9BXL7 1154 aa9.78□□□□□ -0.84
TGFBR3-202ENST00000370399 FKBP8Q14318 412 aa9.78□□□□□ -0.84
TGFBR3-202ENST00000370399 L3MBTL2Q969R5 705 aa9.78□□□□□ -0.84
TGFBR3-202ENST00000370399 CASKIN1Q8WXD9 1431 aa9.78□□□□□ -0.84
TGFBR3-202ENST00000370399 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
TGFBR3-202ENST00000370399 FGD6Q6ZV73 1430 aa9.77□□□□□ -0.85
TGFBR3-202ENST00000370399 CCDC18Q5T9S5 1454 aa9.77□□□□□ -0.85
TGFBR3-202ENST00000370399 NUP155O75694 1391 aa9.77□□□□□ -0.85
TGFBR3-202ENST00000370399 LAMC3Q9Y6N6 1575 aa9.77□□□□□ -0.85
TGFBR3-202ENST00000370399 HSPA5P11021 654 aaKnown RBP9.76□□□□□ -0.85
TGFBR3-202ENST00000370399 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
TGFBR3-202ENST00000370399 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
TGFBR3-202ENST00000370399 BIVM-ERCC5R4GMW8 1640 aa9.75□□□□□ -0.85
TGFBR3-202ENST00000370399 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
TGFBR3-202ENST00000370399 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
TGFBR3-202ENST00000370399 IRX6P78412 446 aaPredicted RBP9.75□□□□□ -0.85
TGFBR3-202ENST00000370399 ESF1Q9H501 851 aaKnown RBP9.75□□□□□ -0.85
TGFBR3-202ENST00000370399 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
TGFBR3-202ENST00000370399 RRBP1Q9P2E9 1410 aaKnown RBP9.74□□□□□ -0.85
TGFBR3-202ENST00000370399 EFCAB2Q5VUJ9 269 aa9.74□□□□□ -0.85
TGFBR3-202ENST00000370399 NCOA2Q15596 1464 aa9.74□□□□□ -0.85
TGFBR3-202ENST00000370399 MYOM3Q5VTT5 1437 aa9.73□□□□□ -0.85
TGFBR3-202ENST00000370399 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
TGFBR3-202ENST00000370399 GGT6Q6P531 493 aa9.72□□□□□ -0.85
TGFBR3-202ENST00000370399 ANKRD30AQ9BXX3 1397 aa9.72□□□□□ -0.85
TGFBR3-202ENST00000370399 FYCO1Q9BQS8 1478 aa9.71□□□□□ -0.86
TGFBR3-202ENST00000370399 PRG4Q92954 1404 aaPredicted RBP9.69□□□□□ -0.86
TGFBR3-202ENST00000370399 TIAM1Q13009 1591 aa9.69□□□□□ -0.86
TGFBR3-202ENST00000370399 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
TGFBR3-202ENST00000370399 KIF3BO15066 747 aa9.69□□□□□ -0.86
TGFBR3-202ENST00000370399 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
TGFBR3-202ENST00000370399 MLECQ14165 292 aa9.68□□□□□ -0.86
TGFBR3-202ENST00000370399 CDK13Q14004 1512 aaKnown RBP9.67□□□□□ -0.86
TGFBR3-202ENST00000370399 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms