RNA–Protein interactions for RNA: ENST00000369570.4

SMIM8-202, Transcript of small integral membrane protein 8, humanhuman

TSL 2

Gene SMIM8, Length 1,568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-202ENST00000369570 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
SMIM8-202ENST00000369570 VPS8Q8N3P4 1428 aa16.66■□□□□ 0.26
SMIM8-202ENST00000369570 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
SMIM8-202ENST00000369570 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
SMIM8-202ENST00000369570 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
SMIM8-202ENST00000369570 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
SMIM8-202ENST00000369570 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
SMIM8-202ENST00000369570 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
SMIM8-202ENST00000369570 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
SMIM8-202ENST00000369570 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
SMIM8-202ENST00000369570 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
SMIM8-202ENST00000369570 WDR62O43379 1518 aa16.56■□□□□ 0.24
SMIM8-202ENST00000369570 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
SMIM8-202ENST00000369570 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
SMIM8-202ENST00000369570 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
SMIM8-202ENST00000369570 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
SMIM8-202ENST00000369570 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
SMIM8-202ENST00000369570 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
SMIM8-202ENST00000369570 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
SMIM8-202ENST00000369570 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
SMIM8-202ENST00000369570 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
SMIM8-202ENST00000369570 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
SMIM8-202ENST00000369570 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
SMIM8-202ENST00000369570 MSH5O43196 834 aa16.43■□□□□ 0.22
SMIM8-202ENST00000369570 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
SMIM8-202ENST00000369570 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
SMIM8-202ENST00000369570 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
SMIM8-202ENST00000369570 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
SMIM8-202ENST00000369570 ADAMTS12P58397 1594 aa16.39■□□□□ 0.21
SMIM8-202ENST00000369570 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
SMIM8-202ENST00000369570 PKNOX2Q96KN3 472 aa16.38■□□□□ 0.21
SMIM8-202ENST00000369570 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
SMIM8-202ENST00000369570 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMIM8-202ENST00000369570 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
SMIM8-202ENST00000369570 SAMD9Q5K651 1589 aa16.32■□□□□ 0.2
SMIM8-202ENST00000369570 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
SMIM8-202ENST00000369570 FYCO1Q9BQS8 1478 aa16.3■□□□□ 0.2
SMIM8-202ENST00000369570 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
SMIM8-202ENST00000369570 TIAM1Q13009 1591 aa16.29■□□□□ 0.2
SMIM8-202ENST00000369570 CFAP43Q8NDM7 1665 aa16.28■□□□□ 0.2
SMIM8-202ENST00000369570 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.2
SMIM8-202ENST00000369570 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
SMIM8-202ENST00000369570 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
SMIM8-202ENST00000369570 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
SMIM8-202ENST00000369570 IQGAP2Q13576 1575 aa16.25■□□□□ 0.19
SMIM8-202ENST00000369570 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
SMIM8-202ENST00000369570 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
SMIM8-202ENST00000369570 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
SMIM8-202ENST00000369570 NEFLP07196 543 aa16.21■□□□□ 0.18
SMIM8-202ENST00000369570 RRBP1Q9P2E9 1410 aaKnown RBP16.2■□□□□ 0.18
SMIM8-202ENST00000369570 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
SMIM8-202ENST00000369570 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
SMIM8-202ENST00000369570 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
SMIM8-202ENST00000369570 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
SMIM8-202ENST00000369570 KIAA0586Q9BVV6 1533 aa16.18■□□□□ 0.18
SMIM8-202ENST00000369570 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
SMIM8-202ENST00000369570 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
SMIM8-202ENST00000369570 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
SMIM8-202ENST00000369570 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
SMIM8-202ENST00000369570 CCNB3Q8WWL7 1395 aa16.11■□□□□ 0.17
SMIM8-202ENST00000369570 HECW1Q76N89 1606 aa16.11■□□□□ 0.17
SMIM8-202ENST00000369570 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
SMIM8-202ENST00000369570 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
SMIM8-202ENST00000369570 KIAA0556O60303 1618 aa16.08■□□□□ 0.17
SMIM8-202ENST00000369570 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
SMIM8-202ENST00000369570 NUP160Q12769 1436 aa16.07■□□□□ 0.16
SMIM8-202ENST00000369570 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
SMIM8-202ENST00000369570 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
SMIM8-202ENST00000369570 HOMEZQ8IX15 550 aa16.06■□□□□ 0.16
SMIM8-202ENST00000369570 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
SMIM8-202ENST00000369570 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
SMIM8-202ENST00000369570 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
SMIM8-202ENST00000369570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMIM8-202ENST00000369570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
SMIM8-202ENST00000369570 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
SMIM8-202ENST00000369570 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
SMIM8-202ENST00000369570 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.15
SMIM8-202ENST00000369570 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
SMIM8-202ENST00000369570 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
SMIM8-202ENST00000369570 SUPT6HQ7KZ85 1726 aaKnown RBP16.01■□□□□ 0.15
SMIM8-202ENST00000369570 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
SMIM8-202ENST00000369570 PDE4CQ08493 712 aa16■□□□□ 0.15
SMIM8-202ENST00000369570 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
SMIM8-202ENST00000369570 EPRSP07814 1512 aaKnown RBP15.98■□□□□ 0.15
SMIM8-202ENST00000369570 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.14
SMIM8-202ENST00000369570 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
SMIM8-202ENST00000369570 NCOA2Q15596 1464 aa15.93■□□□□ 0.14
SMIM8-202ENST00000369570 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
SMIM8-202ENST00000369570 FGD6Q6ZV73 1430 aa15.93■□□□□ 0.14
SMIM8-202ENST00000369570 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
SMIM8-202ENST00000369570 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
SMIM8-202ENST00000369570 FBLN2P98095 1184 aa15.9■□□□□ 0.14
SMIM8-202ENST00000369570 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
SMIM8-202ENST00000369570 CHD1O14646 1710 aa15.89■□□□□ 0.13
SMIM8-202ENST00000369570 MAGI3Q5TCQ9 1506 aa15.88■□□□□ 0.13
SMIM8-202ENST00000369570 NUP153P49790 1475 aaKnown RBP15.88■□□□□ 0.13
SMIM8-202ENST00000369570 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
SMIM8-202ENST00000369570 MIA2Q96PC5 1412 aa15.86■□□□□ 0.13
SMIM8-202ENST00000369570 CDK13Q14004 1512 aaKnown RBP15.85■□□□□ 0.13
SMIM8-202ENST00000369570 TCOF1Q13428 1488 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms