RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 CUX2O14529 1486 aa18.4■□□□□ 0.54
CHD1L-202ENST00000369258 WDR97A6NE52 1622 aa18.4■□□□□ 0.54
CHD1L-202ENST00000369258 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
CHD1L-202ENST00000369258 IGF1RP08069 1367 aa18.35■□□□□ 0.53
CHD1L-202ENST00000369258 ARID3CA6NKF2 412 aa18.33■□□□□ 0.52
CHD1L-202ENST00000369258 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
CHD1L-202ENST00000369258 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
CHD1L-202ENST00000369258 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
CHD1L-202ENST00000369258 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
CHD1L-202ENST00000369258 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
CHD1L-202ENST00000369258 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
CHD1L-202ENST00000369258 ANP32EQ9BTT0 268 aa18.24■□□□□ 0.51
CHD1L-202ENST00000369258 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
CHD1L-202ENST00000369258 LRRC9Q6ZRR7 1453 aa18.22■□□□□ 0.51
CHD1L-202ENST00000369258 ANP32CO43423 234 aa18.21■□□□□ 0.5
CHD1L-202ENST00000369258 CFTRP13569 1480 aa18.2■□□□□ 0.5
CHD1L-202ENST00000369258 TIAM1Q13009 1591 aa18.2■□□□□ 0.5
CHD1L-202ENST00000369258 RBM19Q9Y4C8 960 aaKnown RBP18.18■□□□□ 0.5
CHD1L-202ENST00000369258 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
CHD1L-202ENST00000369258 NEFLP07196 543 aa18.18■□□□□ 0.5
CHD1L-202ENST00000369258 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
CHD1L-202ENST00000369258 FOXD1Q16676 465 aa18.18■□□□□ 0.5
CHD1L-202ENST00000369258 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
CHD1L-202ENST00000369258 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
CHD1L-202ENST00000369258 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHD1L-202ENST00000369258 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
CHD1L-202ENST00000369258 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
CHD1L-202ENST00000369258 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
CHD1L-202ENST00000369258 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
CHD1L-202ENST00000369258 TONSLQ96HA7 1378 aa18.12■□□□□ 0.49
CHD1L-202ENST00000369258 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
CHD1L-202ENST00000369258 PTPRKQ15262 1439 aa18.1■□□□□ 0.49
CHD1L-202ENST00000369258 CCER2I3L3R5 266 aa18.08■□□□□ 0.49
CHD1L-202ENST00000369258 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
CHD1L-202ENST00000369258 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.486e-7■■■■■ 27.9
CHD1L-202ENST00000369258 MSH5O43196 834 aa18.06■□□□□ 0.48
CHD1L-202ENST00000369258 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
CHD1L-202ENST00000369258 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
CHD1L-202ENST00000369258 NESP48681 1621 aa18.04■□□□□ 0.48
CHD1L-202ENST00000369258 FAM9BQ8IZU0 186 aa18.03■□□□□ 0.48
CHD1L-202ENST00000369258 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
CHD1L-202ENST00000369258 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.48
CHD1L-202ENST00000369258 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
CHD1L-202ENST00000369258 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
CHD1L-202ENST00000369258 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
CHD1L-202ENST00000369258 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
CHD1L-202ENST00000369258 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
CHD1L-202ENST00000369258 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
CHD1L-202ENST00000369258 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
CHD1L-202ENST00000369258 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
CHD1L-202ENST00000369258 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
CHD1L-202ENST00000369258 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
CHD1L-202ENST00000369258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHD1L-202ENST00000369258 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
CHD1L-202ENST00000369258 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
CHD1L-202ENST00000369258 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
CHD1L-202ENST00000369258 NAIPQ13075 1403 aa17.88■□□□□ 0.45
CHD1L-202ENST00000369258 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
CHD1L-202ENST00000369258 CASKIN1Q8WXD9 1431 aa17.87■□□□□ 0.45
CHD1L-202ENST00000369258 MRS2Q9HD23 443 aa17.85■□□□□ 0.45
CHD1L-202ENST00000369258 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
CHD1L-202ENST00000369258 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
CHD1L-202ENST00000369258 PRDM2Q13029 1718 aa17.83■□□□□ 0.45
CHD1L-202ENST00000369258 UACAQ9BZF9 1416 aa17.83■□□□□ 0.44
CHD1L-202ENST00000369258 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
CHD1L-202ENST00000369258 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
CHD1L-202ENST00000369258 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
CHD1L-202ENST00000369258 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
CHD1L-202ENST00000369258 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
CHD1L-202ENST00000369258 KDM6BO15054 1643 aa17.8■□□□□ 0.44
CHD1L-202ENST00000369258 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
CHD1L-202ENST00000369258 TOPBP1Q92547 1522 aa17.8■□□□□ 0.44
CHD1L-202ENST00000369258 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
CHD1L-202ENST00000369258 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
CHD1L-202ENST00000369258 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
CHD1L-202ENST00000369258 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
CHD1L-202ENST00000369258 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
CHD1L-202ENST00000369258 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
CHD1L-202ENST00000369258 DENND4BO75064 1496 aaPredicted RBP17.77■□□□□ 0.44
CHD1L-202ENST00000369258 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.43
CHD1L-202ENST00000369258 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
CHD1L-202ENST00000369258 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
CHD1L-202ENST00000369258 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
CHD1L-202ENST00000369258 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
CHD1L-202ENST00000369258 ZNF777Q9ULD5 760 aaPredicted RBP17.73■□□□□ 0.43
CHD1L-202ENST00000369258 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
CHD1L-202ENST00000369258 NBR1Q14596 966 aa17.72■□□□□ 0.43
CHD1L-202ENST00000369258 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
CHD1L-202ENST00000369258 CDK13Q14004 1512 aaKnown RBP17.7■□□□□ 0.42
CHD1L-202ENST00000369258 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
CHD1L-202ENST00000369258 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
CHD1L-202ENST00000369258 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
CHD1L-202ENST00000369258 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
CHD1L-202ENST00000369258 ERICH6BQ5W0A0 696 aa17.67■□□□□ 0.42
CHD1L-202ENST00000369258 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
CHD1L-202ENST00000369258 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
CHD1L-202ENST00000369258 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
CHD1L-202ENST00000369258 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
CHD1L-202ENST00000369258 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
CHD1L-202ENST00000369258 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms