RNA–Protein interactions for RNA: ENST00000368848.6

TUFT1-202, Transcript of tuftelin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TUFT1, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-202ENST00000368848 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
TUFT1-202ENST00000368848 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
TUFT1-202ENST00000368848 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
TUFT1-202ENST00000368848 CUX2O14529 1486 aa17.87■□□□□ 0.45
TUFT1-202ENST00000368848 NEFLP07196 543 aa17.86■□□□□ 0.45
TUFT1-202ENST00000368848 CUX1P39880 1505 aa17.85■□□□□ 0.45
TUFT1-202ENST00000368848 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
TUFT1-202ENST00000368848 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.45
TUFT1-202ENST00000368848 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.44
TUFT1-202ENST00000368848 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
TUFT1-202ENST00000368848 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
TUFT1-202ENST00000368848 ANP32CO43423 234 aa17.78■□□□□ 0.44
TUFT1-202ENST00000368848 CFTRP13569 1480 aa17.77■□□□□ 0.44
TUFT1-202ENST00000368848 MSH5O43196 834 aa17.73■□□□□ 0.43
TUFT1-202ENST00000368848 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
TUFT1-202ENST00000368848 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
TUFT1-202ENST00000368848 IGF1RP08069 1367 aa17.67■□□□□ 0.42
TUFT1-202ENST00000368848 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
TUFT1-202ENST00000368848 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
TUFT1-202ENST00000368848 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
TUFT1-202ENST00000368848 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
TUFT1-202ENST00000368848 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
TUFT1-202ENST00000368848 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
TUFT1-202ENST00000368848 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.4
TUFT1-202ENST00000368848 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
TUFT1-202ENST00000368848 CCDC184Q52MB2 194 aa17.54■□□□□ 0.4
TUFT1-202ENST00000368848 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
TUFT1-202ENST00000368848 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
TUFT1-202ENST00000368848 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
TUFT1-202ENST00000368848 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
TUFT1-202ENST00000368848 MAP3K1Q13233 1512 aa17.5■□□□□ 0.39
TUFT1-202ENST00000368848 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
TUFT1-202ENST00000368848 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
TUFT1-202ENST00000368848 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
TUFT1-202ENST00000368848 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
TUFT1-202ENST00000368848 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
TUFT1-202ENST00000368848 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
TUFT1-202ENST00000368848 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
TUFT1-202ENST00000368848 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
TUFT1-202ENST00000368848 WASHC2AQ641Q2 1341 aa17.46■□□□□ 0.39
TUFT1-202ENST00000368848 HSPA5P11021 654 aaKnown RBP17.46■□□□□ 0.39
TUFT1-202ENST00000368848 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.38
TUFT1-202ENST00000368848 CFAP43Q8NDM7 1665 aa17.45■□□□□ 0.38
TUFT1-202ENST00000368848 RRP7BPQ9NSQ0 103 aa17.45■□□□□ 0.38
TUFT1-202ENST00000368848 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
TUFT1-202ENST00000368848 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
TUFT1-202ENST00000368848 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
TUFT1-202ENST00000368848 FOXD1Q16676 465 aa17.41■□□□□ 0.38
TUFT1-202ENST00000368848 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
TUFT1-202ENST00000368848 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
TUFT1-202ENST00000368848 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
TUFT1-202ENST00000368848 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
TUFT1-202ENST00000368848 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
TUFT1-202ENST00000368848 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
TUFT1-202ENST00000368848 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
TUFT1-202ENST00000368848 CASKIN1Q8WXD9 1431 aa17.35■□□□□ 0.37
TUFT1-202ENST00000368848 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
TUFT1-202ENST00000368848 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
TUFT1-202ENST00000368848 NAIPQ13075 1403 aa17.35■□□□□ 0.37
TUFT1-202ENST00000368848 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
TUFT1-202ENST00000368848 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
TUFT1-202ENST00000368848 NBR1Q14596 966 aa17.34■□□□□ 0.37
TUFT1-202ENST00000368848 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
TUFT1-202ENST00000368848 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
TUFT1-202ENST00000368848 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
TUFT1-202ENST00000368848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
TUFT1-202ENST00000368848 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
TUFT1-202ENST00000368848 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
TUFT1-202ENST00000368848 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
TUFT1-202ENST00000368848 ABCA10Q8WWZ4 1543 aa17.28■□□□□ 0.36
TUFT1-202ENST00000368848 DEKP35659 375 aaKnown RBP17.28■□□□□ 0.36
TUFT1-202ENST00000368848 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
TUFT1-202ENST00000368848 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
TUFT1-202ENST00000368848 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
TUFT1-202ENST00000368848 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
TUFT1-202ENST00000368848 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
TUFT1-202ENST00000368848 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
TUFT1-202ENST00000368848 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
TUFT1-202ENST00000368848 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
TUFT1-202ENST00000368848 NESP48681 1621 aa17.23■□□□□ 0.35
TUFT1-202ENST00000368848 DENND4BO75064 1496 aaPredicted RBP17.23■□□□□ 0.35
TUFT1-202ENST00000368848 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
TUFT1-202ENST00000368848 KDM6BO15054 1643 aa17.21■□□□□ 0.35
TUFT1-202ENST00000368848 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
TUFT1-202ENST00000368848 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
TUFT1-202ENST00000368848 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
TUFT1-202ENST00000368848 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
TUFT1-202ENST00000368848 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
TUFT1-202ENST00000368848 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
TUFT1-202ENST00000368848 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
TUFT1-202ENST00000368848 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
TUFT1-202ENST00000368848 CUL7Q14999 1698 aa17.18■□□□□ 0.34
TUFT1-202ENST00000368848 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
TUFT1-202ENST00000368848 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
TUFT1-202ENST00000368848 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
TUFT1-202ENST00000368848 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
TUFT1-202ENST00000368848 MAGI3Q5TCQ9 1506 aa17.15■□□□□ 0.34
TUFT1-202ENST00000368848 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
TUFT1-202ENST00000368848 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
TUFT1-202ENST00000368848 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms