RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
SHC1-203ENST00000368449 MAP3K1Q13233 1512 aa18.16■□□□□ 0.5
SHC1-203ENST00000368449 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
SHC1-203ENST00000368449 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
SHC1-203ENST00000368449 SIN3AQ96ST3 1273 aa18.13■□□□□ 0.49
SHC1-203ENST00000368449 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
SHC1-203ENST00000368449 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
SHC1-203ENST00000368449 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.48
SHC1-203ENST00000368449 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
SHC1-203ENST00000368449 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
SHC1-203ENST00000368449 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
SHC1-203ENST00000368449 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
SHC1-203ENST00000368449 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
SHC1-203ENST00000368449 ANP32EQ9BTT0 268 aa18.04■□□□□ 0.48
SHC1-203ENST00000368449 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
SHC1-203ENST00000368449 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
SHC1-203ENST00000368449 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
SHC1-203ENST00000368449 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
SHC1-203ENST00000368449 HIRIP3Q9BW71 556 aaPredicted RBP18■□□□□ 0.47
SHC1-203ENST00000368449 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
SHC1-203ENST00000368449 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
SHC1-203ENST00000368449 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
SHC1-203ENST00000368449 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
SHC1-203ENST00000368449 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
SHC1-203ENST00000368449 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
SHC1-203ENST00000368449 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
SHC1-203ENST00000368449 NESP48681 1621 aa17.93■□□□□ 0.46
SHC1-203ENST00000368449 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
SHC1-203ENST00000368449 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.46
SHC1-203ENST00000368449 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.451e-7■■■■■ 45.2
SHC1-203ENST00000368449 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
SHC1-203ENST00000368449 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
SHC1-203ENST00000368449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
SHC1-203ENST00000368449 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
SHC1-203ENST00000368449 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
SHC1-203ENST00000368449 BCANQ96GW7 911 aa17.85■□□□□ 0.45
SHC1-203ENST00000368449 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.45
SHC1-203ENST00000368449 CUL7Q14999 1698 aa17.83■□□□□ 0.44
SHC1-203ENST00000368449 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
SHC1-203ENST00000368449 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
SHC1-203ENST00000368449 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
SHC1-203ENST00000368449 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
SHC1-203ENST00000368449 FKBP8Q14318 412 aa17.8■□□□□ 0.44
SHC1-203ENST00000368449 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
SHC1-203ENST00000368449 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
SHC1-203ENST00000368449 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
SHC1-203ENST00000368449 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
SHC1-203ENST00000368449 TONSLQ96HA7 1378 aa17.78■□□□□ 0.44
SHC1-203ENST00000368449 UACAQ9BZF9 1416 aa17.76■□□□□ 0.43
SHC1-203ENST00000368449 NAIPQ13075 1403 aa17.76■□□□□ 0.43
SHC1-203ENST00000368449 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
SHC1-203ENST00000368449 PTPN23Q9H3S7 1636 aa17.76■□□□□ 0.43
SHC1-203ENST00000368449 ANP32CO43423 234 aa17.75■□□□□ 0.43
SHC1-203ENST00000368449 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
SHC1-203ENST00000368449 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
SHC1-203ENST00000368449 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
SHC1-203ENST00000368449 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
SHC1-203ENST00000368449 MYOM3Q5VTT5 1437 aa17.73■□□□□ 0.43
SHC1-203ENST00000368449 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
SHC1-203ENST00000368449 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
SHC1-203ENST00000368449 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
SHC1-203ENST00000368449 MAGI3Q5TCQ9 1506 aa17.69■□□□□ 0.42
SHC1-203ENST00000368449 RRP7BPQ9NSQ0 103 aa17.69■□□□□ 0.42
SHC1-203ENST00000368449 CHIC2Q9UKJ5 165 aa17.68■□□□□ 0.42
SHC1-203ENST00000368449 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.42
SHC1-203ENST00000368449 DENND4BO75064 1496 aaPredicted RBP17.64■□□□□ 0.41
SHC1-203ENST00000368449 UGGT2Q9NYU1 1516 aa17.64■□□□□ 0.41
SHC1-203ENST00000368449 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
SHC1-203ENST00000368449 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
SHC1-203ENST00000368449 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
SHC1-203ENST00000368449 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
SHC1-203ENST00000368449 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
SHC1-203ENST00000368449 NEFLP07196 543 aa17.6■□□□□ 0.41
SHC1-203ENST00000368449 KDM6BO15054 1643 aa17.59■□□□□ 0.41
SHC1-203ENST00000368449 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
SHC1-203ENST00000368449 ARID3CA6NKF2 412 aa17.59■□□□□ 0.41
SHC1-203ENST00000368449 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
SHC1-203ENST00000368449 FOXD1Q16676 465 aa17.56■□□□□ 0.4
SHC1-203ENST00000368449 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
SHC1-203ENST00000368449 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
SHC1-203ENST00000368449 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
SHC1-203ENST00000368449 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHC1-203ENST00000368449 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
SHC1-203ENST00000368449 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
SHC1-203ENST00000368449 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
SHC1-203ENST00000368449 MPHOSPH9Q99550 1183 aa17.52■□□□□ 0.4
SHC1-203ENST00000368449 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
SHC1-203ENST00000368449 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
SHC1-203ENST00000368449 L3MBTL2Q969R5 705 aa17.51■□□□□ 0.39
SHC1-203ENST00000368449 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
SHC1-203ENST00000368449 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
SHC1-203ENST00000368449 MSH5O43196 834 aa17.5■□□□□ 0.39
SHC1-203ENST00000368449 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
SHC1-203ENST00000368449 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHC1-203ENST00000368449 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
SHC1-203ENST00000368449 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
SHC1-203ENST00000368449 MIA2Q96PC5 1412 aa17.45■□□□□ 0.38
SHC1-203ENST00000368449 NBPF8Q3BBV2 869 aa17.45■□□□□ 0.38
SHC1-203ENST00000368449 WDR62O43379 1518 aa17.44■□□□□ 0.38
SHC1-203ENST00000368449 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms