RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 RBM19Q9Y4C8 960 aaKnown RBP17.48■□□□□ 0.39
CCT3-203ENST00000368258 FKBP8Q14318 412 aa17.46■□□□□ 0.39
CCT3-203ENST00000368258 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
CCT3-203ENST00000368258 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
CCT3-203ENST00000368258 NEFLP07196 543 aa17.44■□□□□ 0.38
CCT3-203ENST00000368258 CFTRP13569 1480 aa17.42■□□□□ 0.38
CCT3-203ENST00000368258 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
CCT3-203ENST00000368258 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
CCT3-203ENST00000368258 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
CCT3-203ENST00000368258 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
CCT3-203ENST00000368258 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
CCT3-203ENST00000368258 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
CCT3-203ENST00000368258 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
CCT3-203ENST00000368258 PPP1R15AO75807 674 aaPredicted RBP17.36■□□□□ 0.37
CCT3-203ENST00000368258 BCANQ96GW7 911 aa17.36■□□□□ 0.37
CCT3-203ENST00000368258 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
CCT3-203ENST00000368258 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
CCT3-203ENST00000368258 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
CCT3-203ENST00000368258 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
CCT3-203ENST00000368258 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
CCT3-203ENST00000368258 MSH5O43196 834 aa17.27■□□□□ 0.35
CCT3-203ENST00000368258 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
CCT3-203ENST00000368258 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
CCT3-203ENST00000368258 ERICH6BQ5W0A0 696 aa17.24■□□□□ 0.35
CCT3-203ENST00000368258 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
CCT3-203ENST00000368258 ANP32CO43423 234 aa17.23■□□□□ 0.35
CCT3-203ENST00000368258 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
CCT3-203ENST00000368258 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
CCT3-203ENST00000368258 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
CCT3-203ENST00000368258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCT3-203ENST00000368258 CUX1P39880 1505 aa17.17■□□□□ 0.34
CCT3-203ENST00000368258 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
CCT3-203ENST00000368258 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
CCT3-203ENST00000368258 ITGAEP38570 1179 aa17.13■□□□□ 0.33
CCT3-203ENST00000368258 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
CCT3-203ENST00000368258 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
CCT3-203ENST00000368258 PHLDB1Q86UU1 1377 aa17.1■□□□□ 0.33
CCT3-203ENST00000368258 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
CCT3-203ENST00000368258 SIN3AQ96ST3 1273 aa17.1■□□□□ 0.33
CCT3-203ENST00000368258 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.33
CCT3-203ENST00000368258 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
CCT3-203ENST00000368258 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
CCT3-203ENST00000368258 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
CCT3-203ENST00000368258 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
CCT3-203ENST00000368258 TONSLQ96HA7 1378 aa17■□□□□ 0.31
CCT3-203ENST00000368258 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
CCT3-203ENST00000368258 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.315e-8■■■■■ 30.7
CCT3-203ENST00000368258 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
CCT3-203ENST00000368258 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
CCT3-203ENST00000368258 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
CCT3-203ENST00000368258 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
CCT3-203ENST00000368258 FYCO1Q9BQS8 1478 aa16.98■□□□□ 0.31
CCT3-203ENST00000368258 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCT3-203ENST00000368258 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
CCT3-203ENST00000368258 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.3
CCT3-203ENST00000368258 IGF1RP08069 1367 aa16.96■□□□□ 0.3
CCT3-203ENST00000368258 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
CCT3-203ENST00000368258 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
CCT3-203ENST00000368258 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
CCT3-203ENST00000368258 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
CCT3-203ENST00000368258 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
CCT3-203ENST00000368258 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
CCT3-203ENST00000368258 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
CCT3-203ENST00000368258 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
CCT3-203ENST00000368258 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
CCT3-203ENST00000368258 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
CCT3-203ENST00000368258 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
CCT3-203ENST00000368258 FGD6Q6ZV73 1430 aa16.89■□□□□ 0.29
CCT3-203ENST00000368258 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
CCT3-203ENST00000368258 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
CCT3-203ENST00000368258 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
CCT3-203ENST00000368258 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
CCT3-203ENST00000368258 CHD1O14646 1710 aa16.88■□□□□ 0.29
CCT3-203ENST00000368258 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
CCT3-203ENST00000368258 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
CCT3-203ENST00000368258 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
CCT3-203ENST00000368258 IRX6P78412 446 aaPredicted RBP16.84■□□□□ 0.29
CCT3-203ENST00000368258 WASHC2AQ641Q2 1341 aa16.82■□□□□ 0.28
CCT3-203ENST00000368258 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
CCT3-203ENST00000368258 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
CCT3-203ENST00000368258 NAIPQ13075 1403 aa16.82■□□□□ 0.28
CCT3-203ENST00000368258 POLR1AO95602 1720 aaPredicted RBP16.81■□□□□ 0.28
CCT3-203ENST00000368258 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
CCT3-203ENST00000368258 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
CCT3-203ENST00000368258 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
CCT3-203ENST00000368258 PTPRKQ15262 1439 aa16.77■□□□□ 0.28
CCT3-203ENST00000368258 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
CCT3-203ENST00000368258 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
CCT3-203ENST00000368258 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
CCT3-203ENST00000368258 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
CCT3-203ENST00000368258 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
CCT3-203ENST00000368258 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
CCT3-203ENST00000368258 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
CCT3-203ENST00000368258 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
CCT3-203ENST00000368258 PRKRIP1Q9H875 184 aaPredicted RBP16.74■□□□□ 0.27
CCT3-203ENST00000368258 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
CCT3-203ENST00000368258 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCT3-203ENST00000368258 FHOD3Q2V2M9 1422 aa16.73■□□□□ 0.27
CCT3-203ENST00000368258 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
CCT3-203ENST00000368258 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms