RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
CACNA1S-202ENST00000367338 FKBP8Q14318 412 aa13.27□□□□□ -0.28
CACNA1S-202ENST00000367338 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.28
CACNA1S-202ENST00000367338 NEFMP07197 916 aa13.27□□□□□ -0.29
CACNA1S-202ENST00000367338 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
CACNA1S-202ENST00000367338 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
CACNA1S-202ENST00000367338 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
CACNA1S-202ENST00000367338 EIF4G2P78344 907 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNA1S-202ENST00000367338 HNRNPUQ00839 825 aaKnown RBP eCLIP13.24□□□□□ -0.29
CACNA1S-202ENST00000367338 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
CACNA1S-202ENST00000367338 RRP7BPQ9NSQ0 103 aa13.23□□□□□ -0.29
CACNA1S-202ENST00000367338 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
CACNA1S-202ENST00000367338 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
CACNA1S-202ENST00000367338 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
CACNA1S-202ENST00000367338 SYNJ1O43426 1573 aa13.2□□□□□ -0.3
CACNA1S-202ENST00000367338 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
CACNA1S-202ENST00000367338 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
CACNA1S-202ENST00000367338 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
CACNA1S-202ENST00000367338 HMGXB3Q12766 1538 aa13.17□□□□□ -0.3
CACNA1S-202ENST00000367338 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
CACNA1S-202ENST00000367338 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
CACNA1S-202ENST00000367338 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
CACNA1S-202ENST00000367338 FANCD2Q9BXW9 1451 aa13.15□□□□□ -0.3
CACNA1S-202ENST00000367338 DHX57Q6P158 1386 aaKnown RBP13.15□□□□□ -0.3
CACNA1S-202ENST00000367338 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
CACNA1S-202ENST00000367338 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
CACNA1S-202ENST00000367338 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
CACNA1S-202ENST00000367338 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
CACNA1S-202ENST00000367338 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
CACNA1S-202ENST00000367338 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
CACNA1S-202ENST00000367338 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
CACNA1S-202ENST00000367338 CFTRP13569 1480 aa13.11□□□□□ -0.31
CACNA1S-202ENST00000367338 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
CACNA1S-202ENST00000367338 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
CACNA1S-202ENST00000367338 IGF1RP08069 1367 aa13.1□□□□□ -0.31
CACNA1S-202ENST00000367338 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
CACNA1S-202ENST00000367338 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
CACNA1S-202ENST00000367338 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
CACNA1S-202ENST00000367338 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
CACNA1S-202ENST00000367338 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
CACNA1S-202ENST00000367338 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
CACNA1S-202ENST00000367338 RRBP1Q9P2E9 1410 aaKnown RBP13.03□□□□□ -0.32
CACNA1S-202ENST00000367338 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
CACNA1S-202ENST00000367338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNA1S-202ENST00000367338 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
CACNA1S-202ENST00000367338 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
CACNA1S-202ENST00000367338 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
CACNA1S-202ENST00000367338 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.32
CACNA1S-202ENST00000367338 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.32
CACNA1S-202ENST00000367338 CUX1P39880 1505 aa13.02□□□□□ -0.33
CACNA1S-202ENST00000367338 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
CACNA1S-202ENST00000367338 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
CACNA1S-202ENST00000367338 SLC24A1O60721 1099 aa13□□□□□ -0.33
CACNA1S-202ENST00000367338 UPF2Q9HAU5 1272 aaKnown RBP12.99□□□□□ -0.33
CACNA1S-202ENST00000367338 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
CACNA1S-202ENST00000367338 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
CACNA1S-202ENST00000367338 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
CACNA1S-202ENST00000367338 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
CACNA1S-202ENST00000367338 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
CACNA1S-202ENST00000367338 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
CACNA1S-202ENST00000367338 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
CACNA1S-202ENST00000367338 ESF1Q9H501 851 aaKnown RBP12.97□□□□□ -0.33
CACNA1S-202ENST00000367338 HSPA5P11021 654 aaKnown RBP12.96□□□□□ -0.33
CACNA1S-202ENST00000367338 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.33
CACNA1S-202ENST00000367338 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.34
CACNA1S-202ENST00000367338 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
CACNA1S-202ENST00000367338 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
CACNA1S-202ENST00000367338 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
CACNA1S-202ENST00000367338 CDCA8Q53HL2 280 aa12.94□□□□□ -0.34
CACNA1S-202ENST00000367338 FGD6Q6ZV73 1430 aa12.93□□□□□ -0.34
CACNA1S-202ENST00000367338 ANKRD30AQ9BXX3 1397 aa12.93□□□□□ -0.34
CACNA1S-202ENST00000367338 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
CACNA1S-202ENST00000367338 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
CACNA1S-202ENST00000367338 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
CACNA1S-202ENST00000367338 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
CACNA1S-202ENST00000367338 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
CACNA1S-202ENST00000367338 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
CACNA1S-202ENST00000367338 IRX6P78412 446 aaPredicted RBP12.9□□□□□ -0.34
CACNA1S-202ENST00000367338 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.35
CACNA1S-202ENST00000367338 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
CACNA1S-202ENST00000367338 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
CACNA1S-202ENST00000367338 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
CACNA1S-202ENST00000367338 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
CACNA1S-202ENST00000367338 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
CACNA1S-202ENST00000367338 PKD2Q13563 968 aa12.86□□□□□ -0.35
CACNA1S-202ENST00000367338 RGL3Q3MIN7 710 aa12.86□□□□□ -0.35
CACNA1S-202ENST00000367338 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
CACNA1S-202ENST00000367338 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
CACNA1S-202ENST00000367338 GLIPR1L2Q4G1C9 344 aa12.85□□□□□ -0.35
CACNA1S-202ENST00000367338 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
CACNA1S-202ENST00000367338 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
CACNA1S-202ENST00000367338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
CACNA1S-202ENST00000367338 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
CACNA1S-202ENST00000367338 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
CACNA1S-202ENST00000367338 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
CACNA1S-202ENST00000367338 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
CACNA1S-202ENST00000367338 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
CACNA1S-202ENST00000367338 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
CACNA1S-202ENST00000367338 ANP32EQ9BTT0 268 aa12.82□□□□□ -0.36
CACNA1S-202ENST00000367338 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms