RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.48
CACNA1S-202ENST00000367338 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
CACNA1S-202ENST00000367338 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
CACNA1S-202ENST00000367338 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
CACNA1S-202ENST00000367338 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
CACNA1S-202ENST00000367338 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
CACNA1S-202ENST00000367338 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.03
CACNA1S-202ENST00000367338 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
CACNA1S-202ENST00000367338 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
CACNA1S-202ENST00000367338 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
CACNA1S-202ENST00000367338 CHIC1Q5VXU3 224 aa15.12■□□□□ 0.01
CACNA1S-202ENST00000367338 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
CACNA1S-202ENST00000367338 ZEB1P37275 1124 aaPredicted RBP15.1■□□□□ 0.01
CACNA1S-202ENST00000367338 APLP2Q06481 763 aa15□□□□□ -0.01
CACNA1S-202ENST00000367338 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
CACNA1S-202ENST00000367338 HRCP23327 699 aa14.89□□□□□ -0.03
CACNA1S-202ENST00000367338 LOC105371045A0A1W2PR82 267 aa14.77□□□□□ -0.05
CACNA1S-202ENST00000367338 ABCC9O60706 1549 aa14.75□□□□□ -0.05
CACNA1S-202ENST00000367338 UBTFP17480 764 aaKnown RBP14.74□□□□□ -0.05
CACNA1S-202ENST00000367338 CCER1Q8TC90 406 aaPredicted RBP14.74□□□□□ -0.05
CACNA1S-202ENST00000367338 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
CACNA1S-202ENST00000367338 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
CACNA1S-202ENST00000367338 SCRIBQ14160 1630 aa14.62□□□□□ -0.07
CACNA1S-202ENST00000367338 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
CACNA1S-202ENST00000367338 ERICH6Q7L0X2 663 aa14.55□□□□□ -0.08
CACNA1S-202ENST00000367338 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
CACNA1S-202ENST00000367338 MYT1Q01538 1121 aa14.5□□□□□ -0.09
CACNA1S-202ENST00000367338 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
CACNA1S-202ENST00000367338 NACADO15069 1562 aa14.42□□□□□ -0.1
CACNA1S-202ENST00000367338 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
CACNA1S-202ENST00000367338 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
CACNA1S-202ENST00000367338 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
CACNA1S-202ENST00000367338 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
CACNA1S-202ENST00000367338 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
CACNA1S-202ENST00000367338 NEFLP07196 543 aa14.31□□□□□ -0.12
CACNA1S-202ENST00000367338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
CACNA1S-202ENST00000367338 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
CACNA1S-202ENST00000367338 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.14
CACNA1S-202ENST00000367338 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
CACNA1S-202ENST00000367338 DIEXFQ68CQ4 756 aaKnown RBP14.13□□□□□ -0.15
CACNA1S-202ENST00000367338 BAZ1AQ9NRL2 1556 aaPredicted RBP14.12□□□□□ -0.15
CACNA1S-202ENST00000367338 EEA1Q15075 1411 aa14.1□□□□□ -0.15
CACNA1S-202ENST00000367338 ITGAEP38570 1179 aa14.05□□□□□ -0.16
CACNA1S-202ENST00000367338 CECR2Q9BXF3 1484 aa14□□□□□ -0.17
CACNA1S-202ENST00000367338 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
CACNA1S-202ENST00000367338 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
CACNA1S-202ENST00000367338 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.18
CACNA1S-202ENST00000367338 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
CACNA1S-202ENST00000367338 TNIKQ9UKE5 1360 aa13.91□□□□□ -0.18
CACNA1S-202ENST00000367338 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
CACNA1S-202ENST00000367338 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
CACNA1S-202ENST00000367338 FAM50AQ14320 339 aaKnown RBP13.9□□□□□ -0.18
CACNA1S-202ENST00000367338 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
CACNA1S-202ENST00000367338 CLIP1P30622 1438 aa13.87□□□□□ -0.19
CACNA1S-202ENST00000367338 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
CACNA1S-202ENST00000367338 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
CACNA1S-202ENST00000367338 ACIN1Q9UKV3 1341 aaKnown RBP13.81□□□□□ -0.2
CACNA1S-202ENST00000367338 WIZO95785 1651 aa13.81□□□□□ -0.2
CACNA1S-202ENST00000367338 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
CACNA1S-202ENST00000367338 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
CACNA1S-202ENST00000367338 MYT1LQ9UL68 1186 aa13.76□□□□□ -0.21
CACNA1S-202ENST00000367338 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
CACNA1S-202ENST00000367338 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
CACNA1S-202ENST00000367338 SMARCA4P51532 1647 aa13.71□□□□□ -0.21
CACNA1S-202ENST00000367338 KIF27Q86VH2 1401 aa13.71□□□□□ -0.22
CACNA1S-202ENST00000367338 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
CACNA1S-202ENST00000367338 TRIM52Q96A61 297 aa13.69□□□□□ -0.22
CACNA1S-202ENST00000367338 SOGA1O94964 1423 aa13.69□□□□□ -0.22
CACNA1S-202ENST00000367338 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
CACNA1S-202ENST00000367338 ANP32CO43423 234 aa13.67□□□□□ -0.22
CACNA1S-202ENST00000367338 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
CACNA1S-202ENST00000367338 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
CACNA1S-202ENST00000367338 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
CACNA1S-202ENST00000367338 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
CACNA1S-202ENST00000367338 CDK11AQ9UQ88 783 aaPredicted RBP13.57□□□□□ -0.24
CACNA1S-202ENST00000367338 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
CACNA1S-202ENST00000367338 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
CACNA1S-202ENST00000367338 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
CACNA1S-202ENST00000367338 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-202ENST00000367338 FHAD1B1AJZ9 1412 aa13.49□□□□□ -0.25
CACNA1S-202ENST00000367338 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
CACNA1S-202ENST00000367338 MIER1Q8N108 512 aa13.45□□□□□ -0.26
CACNA1S-202ENST00000367338 CUX2O14529 1486 aa13.45□□□□□ -0.26
CACNA1S-202ENST00000367338 FBLN2P98095 1184 aa13.44□□□□□ -0.26
CACNA1S-202ENST00000367338 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
CACNA1S-202ENST00000367338 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
CACNA1S-202ENST00000367338 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
CACNA1S-202ENST00000367338 DDX10Q13206 875 aaKnown RBP13.38□□□□□ -0.27
CACNA1S-202ENST00000367338 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
CACNA1S-202ENST00000367338 BCANQ96GW7 911 aa13.37□□□□□ -0.27
CACNA1S-202ENST00000367338 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
CACNA1S-202ENST00000367338 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
CACNA1S-202ENST00000367338 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
CACNA1S-202ENST00000367338 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
CACNA1S-202ENST00000367338 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
CACNA1S-202ENST00000367338 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
CACNA1S-202ENST00000367338 KIF21BO75037 1637 aa13.33□□□□□ -0.28
CACNA1S-202ENST00000367338 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
CACNA1S-202ENST00000367338 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
CACNA1S-202ENST00000367338 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms