RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
PARP1-203ENST00000366794 FOXD1Q16676 465 aa19.85■□□□□ 0.77
PARP1-203ENST00000366794 FAM9BQ8IZU0 186 aa19.85■□□□□ 0.77
PARP1-203ENST00000366794 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
PARP1-203ENST00000366794 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
PARP1-203ENST00000366794 KDM2AQ9Y2K7 1162 aa19.81■□□□□ 0.76
PARP1-203ENST00000366794 FHOD3Q2V2M9 1422 aa19.81■□□□□ 0.76
PARP1-203ENST00000366794 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
PARP1-203ENST00000366794 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
PARP1-203ENST00000366794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.764e-11■■■□□ 16
PARP1-203ENST00000366794 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
PARP1-203ENST00000366794 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
PARP1-203ENST00000366794 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
PARP1-203ENST00000366794 IGF1RP08069 1367 aa19.73■□□□□ 0.75
PARP1-203ENST00000366794 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
PARP1-203ENST00000366794 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
PARP1-203ENST00000366794 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
PARP1-203ENST00000366794 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
PARP1-203ENST00000366794 NESP48681 1621 aa19.69■□□□□ 0.74
PARP1-203ENST00000366794 KIF21BO75037 1637 aa19.67■□□□□ 0.74
PARP1-203ENST00000366794 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
PARP1-203ENST00000366794 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
PARP1-203ENST00000366794 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.74
PARP1-203ENST00000366794 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
PARP1-203ENST00000366794 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
PARP1-203ENST00000366794 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
PARP1-203ENST00000366794 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
PARP1-203ENST00000366794 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
PARP1-203ENST00000366794 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.73
PARP1-203ENST00000366794 CUX1P39880 1505 aa19.57■□□□□ 0.72
PARP1-203ENST00000366794 EIF4G2P78344 907 aaKnown RBP eCLIP19.57■□□□□ 0.72
PARP1-203ENST00000366794 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
PARP1-203ENST00000366794 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
PARP1-203ENST00000366794 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
PARP1-203ENST00000366794 TSPY4P0CV99 314 aa19.52■□□□□ 0.72
PARP1-203ENST00000366794 TSPY10P0CW01 314 aa19.52■□□□□ 0.72
PARP1-203ENST00000366794 CFTRP13569 1480 aa19.51■□□□□ 0.71
PARP1-203ENST00000366794 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
PARP1-203ENST00000366794 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
PARP1-203ENST00000366794 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
PARP1-203ENST00000366794 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
PARP1-203ENST00000366794 CHGAP10645 457 aaKnown RBP19.47■□□□□ 0.71
PARP1-203ENST00000366794 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
PARP1-203ENST00000366794 HSPA5P11021 654 aaKnown RBP19.46■□□□□ 0.71
PARP1-203ENST00000366794 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
PARP1-203ENST00000366794 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
PARP1-203ENST00000366794 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■■■ 28.4
PARP1-203ENST00000366794 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
PARP1-203ENST00000366794 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
PARP1-203ENST00000366794 L3MBTL2Q969R5 705 aa19.4■□□□□ 0.7
PARP1-203ENST00000366794 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.7
PARP1-203ENST00000366794 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
PARP1-203ENST00000366794 FMN1Q68DA7 1419 aa19.34■□□□□ 0.69
PARP1-203ENST00000366794 BCL11AQ9H165 835 aa19.34■□□□□ 0.69
PARP1-203ENST00000366794 PKD2Q13563 968 aa19.33■□□□□ 0.69
PARP1-203ENST00000366794 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
PARP1-203ENST00000366794 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.68
PARP1-203ENST00000366794 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
PARP1-203ENST00000366794 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
PARP1-203ENST00000366794 LRRC9Q6ZRR7 1453 aa19.28■□□□□ 0.68
PARP1-203ENST00000366794 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
PARP1-203ENST00000366794 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
PARP1-203ENST00000366794 JPH4Q96JJ6 628 aa19.27■□□□□ 0.67
PARP1-203ENST00000366794 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
PARP1-203ENST00000366794 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
PARP1-203ENST00000366794 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
PARP1-203ENST00000366794 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
PARP1-203ENST00000366794 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
PARP1-203ENST00000366794 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
PARP1-203ENST00000366794 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
PARP1-203ENST00000366794 CCDC136Q96JN2 1154 aa19.2■□□□□ 0.66
PARP1-203ENST00000366794 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
PARP1-203ENST00000366794 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
PARP1-203ENST00000366794 FGD6Q6ZV73 1430 aa19.18■□□□□ 0.66
PARP1-203ENST00000366794 TIMELESSQ9UNS1 1208 aa19.16■□□□□ 0.66
PARP1-203ENST00000366794 NUP155O75694 1391 aa19.15■□□□□ 0.66
PARP1-203ENST00000366794 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
PARP1-203ENST00000366794 TSHZ2Q9NRE2 1034 aa19.13■□□□□ 0.65
PARP1-203ENST00000366794 MYT1Q01538 1121 aa19.12■□□□□ 0.65
PARP1-203ENST00000366794 NBR1Q14596 966 aa19.1■□□□□ 0.65
PARP1-203ENST00000366794 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
PARP1-203ENST00000366794 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
PARP1-203ENST00000366794 NCOA2Q15596 1464 aa19.08■□□□□ 0.65
PARP1-203ENST00000366794 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
PARP1-203ENST00000366794 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
PARP1-203ENST00000366794 WDR97A6NE52 1622 aa19.06■□□□□ 0.64
PARP1-203ENST00000366794 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
PARP1-203ENST00000366794 CASKIN1Q8WXD9 1431 aa19.05■□□□□ 0.64
PARP1-203ENST00000366794 TIAM1Q13009 1591 aa19.05■□□□□ 0.64
PARP1-203ENST00000366794 MYOM3Q5VTT5 1437 aa19.04■□□□□ 0.64
PARP1-203ENST00000366794 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
PARP1-203ENST00000366794 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
PARP1-203ENST00000366794 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
PARP1-203ENST00000366794 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.64
PARP1-203ENST00000366794 RBM19Q9Y4C8 960 aaKnown RBP19.01■□□□□ 0.63
PARP1-203ENST00000366794 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
PARP1-203ENST00000366794 WDR43Q15061 677 aaKnown RBP eCLIP18.99■□□□□ 0.634e-6■■□□□ 14
PARP1-203ENST00000366794 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
PARP1-203ENST00000366794 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
PARP1-203ENST00000366794 SAFB2Q14151 953 aaKnown RBP eCLIP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms