RNA–Protein interactions for RNA: ENST00000366517.5

SMYD3-202, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-202ENST00000366517 CHD1O14646 1710 aa14.17□□□□□ -0.14
SMYD3-202ENST00000366517 WIZO95785 1651 aa14.17□□□□□ -0.14
SMYD3-202ENST00000366517 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
SMYD3-202ENST00000366517 PRDM2Q13029 1718 aa14.14□□□□□ -0.15
SMYD3-202ENST00000366517 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
SMYD3-202ENST00000366517 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
SMYD3-202ENST00000366517 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
SMYD3-202ENST00000366517 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
SMYD3-202ENST00000366517 CLASP1Q7Z460 1538 aa14.06□□□□□ -0.16
SMYD3-202ENST00000366517 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■■■□ 20.6
SMYD3-202ENST00000366517 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
SMYD3-202ENST00000366517 FBLN2P98095 1184 aa14.02□□□□□ -0.17
SMYD3-202ENST00000366517 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
SMYD3-202ENST00000366517 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
SMYD3-202ENST00000366517 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
SMYD3-202ENST00000366517 WDR97A6NE52 1622 aa13.95□□□□□ -0.18
SMYD3-202ENST00000366517 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
SMYD3-202ENST00000366517 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
SMYD3-202ENST00000366517 CHMP7Q8WUX9 453 aaPredicted RBP13.9□□□□□ -0.18
SMYD3-202ENST00000366517 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
SMYD3-202ENST00000366517 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
SMYD3-202ENST00000366517 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
SMYD3-202ENST00000366517 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.19
SMYD3-202ENST00000366517 SOGA1O94964 1423 aa13.83□□□□□ -0.2
SMYD3-202ENST00000366517 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
SMYD3-202ENST00000366517 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
SMYD3-202ENST00000366517 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
SMYD3-202ENST00000366517 SLC24A1O60721 1099 aa13.82□□□□□ -0.2
SMYD3-202ENST00000366517 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
SMYD3-202ENST00000366517 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
SMYD3-202ENST00000366517 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
SMYD3-202ENST00000366517 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
SMYD3-202ENST00000366517 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
SMYD3-202ENST00000366517 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
SMYD3-202ENST00000366517 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
SMYD3-202ENST00000366517 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
SMYD3-202ENST00000366517 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
SMYD3-202ENST00000366517 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
SMYD3-202ENST00000366517 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
SMYD3-202ENST00000366517 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
SMYD3-202ENST00000366517 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
SMYD3-202ENST00000366517 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
SMYD3-202ENST00000366517 KDM6BO15054 1643 aa13.63□□□□□ -0.23
SMYD3-202ENST00000366517 NUP160Q12769 1436 aa13.63□□□□□ -0.23
SMYD3-202ENST00000366517 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
SMYD3-202ENST00000366517 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
SMYD3-202ENST00000366517 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
SMYD3-202ENST00000366517 DIP2BQ9P265 1576 aa13.59□□□□□ -0.23
SMYD3-202ENST00000366517 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.23
SMYD3-202ENST00000366517 FBXO41Q8TF61 875 aa13.58□□□□□ -0.23
SMYD3-202ENST00000366517 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
SMYD3-202ENST00000366517 CUX1P39880 1505 aa13.57□□□□□ -0.24
SMYD3-202ENST00000366517 ABCA10Q8WWZ4 1543 aa13.56□□□□□ -0.24
SMYD3-202ENST00000366517 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMYD3-202ENST00000366517 HECW2Q9P2P5 1572 aa13.56□□□□□ -0.24
SMYD3-202ENST00000366517 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
SMYD3-202ENST00000366517 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
SMYD3-202ENST00000366517 FKBP8Q14318 412 aa13.51□□□□□ -0.25
SMYD3-202ENST00000366517 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
SMYD3-202ENST00000366517 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
SMYD3-202ENST00000366517 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
SMYD3-202ENST00000366517 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
SMYD3-202ENST00000366517 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
SMYD3-202ENST00000366517 TSPOAP1O95153 1857 aa13.46□□□□□ -0.25
SMYD3-202ENST00000366517 ADCY10Q96PN6 1610 aa13.44□□□□□ -0.26
SMYD3-202ENST00000366517 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
SMYD3-202ENST00000366517 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
SMYD3-202ENST00000366517 GLI2P10070 1586 aa13.38□□□□□ -0.27
SMYD3-202ENST00000366517 LMTK3Q96Q04 1460 aa13.37□□□□□ -0.27
SMYD3-202ENST00000366517 WRNQ14191 1432 aaPredicted RBP eCLIP13.37□□□□□ -0.27
SMYD3-202ENST00000366517 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
SMYD3-202ENST00000366517 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
SMYD3-202ENST00000366517 SOCS7O14512 581 aa13.32□□□□□ -0.28
SMYD3-202ENST00000366517 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
SMYD3-202ENST00000366517 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
SMYD3-202ENST00000366517 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
SMYD3-202ENST00000366517 COL17A1Q9UMD9 1497 aaPredicted RBP13.31□□□□□ -0.28
SMYD3-202ENST00000366517 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
SMYD3-202ENST00000366517 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
SMYD3-202ENST00000366517 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.28
SMYD3-202ENST00000366517 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
SMYD3-202ENST00000366517 ASXL2Q76L83 1435 aa13.25□□□□□ -0.29
SMYD3-202ENST00000366517 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
SMYD3-202ENST00000366517 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
SMYD3-202ENST00000366517 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
SMYD3-202ENST00000366517 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
SMYD3-202ENST00000366517 PTPRGP23470 1445 aa13.22□□□□□ -0.29
SMYD3-202ENST00000366517 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.29
SMYD3-202ENST00000366517 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
SMYD3-202ENST00000366517 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.29
SMYD3-202ENST00000366517 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.29
SMYD3-202ENST00000366517 PROM2Q8N271 834 aa13.2□□□□□ -0.3
SMYD3-202ENST00000366517 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
SMYD3-202ENST00000366517 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
SMYD3-202ENST00000366517 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
SMYD3-202ENST00000366517 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
SMYD3-202ENST00000366517 TNIKQ9UKE5 1360 aa13.15□□□□□ -0.3
SMYD3-202ENST00000366517 CUL7Q14999 1698 aa13.13□□□□□ -0.31
SMYD3-202ENST00000366517 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
SMYD3-202ENST00000366517 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms