RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 TSPY10P0CW01 314 aa12.39□□□□□ -0.43
NLRP3-204ENST00000366497 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
NLRP3-204ENST00000366497 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
NLRP3-204ENST00000366497 BCANQ96GW7 911 aa12.37□□□□□ -0.43
NLRP3-204ENST00000366497 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
NLRP3-204ENST00000366497 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
NLRP3-204ENST00000366497 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
NLRP3-204ENST00000366497 CLSPNQ9HAW4 1339 aa12.34□□□□□ -0.43
NLRP3-204ENST00000366497 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
NLRP3-204ENST00000366497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
NLRP3-204ENST00000366497 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
NLRP3-204ENST00000366497 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
NLRP3-204ENST00000366497 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
NLRP3-204ENST00000366497 IGF1RP08069 1367 aa12.3□□□□□ -0.44
NLRP3-204ENST00000366497 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
NLRP3-204ENST00000366497 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
NLRP3-204ENST00000366497 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
NLRP3-204ENST00000366497 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
NLRP3-204ENST00000366497 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
NLRP3-204ENST00000366497 FMN1Q68DA7 1419 aa12.27□□□□□ -0.45
NLRP3-204ENST00000366497 CFTRP13569 1480 aa12.25□□□□□ -0.45
NLRP3-204ENST00000366497 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
NLRP3-204ENST00000366497 SETD5Q9C0A6 1442 aa12.25□□□□□ -0.45
NLRP3-204ENST00000366497 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
NLRP3-204ENST00000366497 HNRNPUQ00839 825 aaKnown RBP eCLIP12.23□□□□□ -0.45
NLRP3-204ENST00000366497 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
NLRP3-204ENST00000366497 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
NLRP3-204ENST00000366497 FAM9BQ8IZU0 186 aa12.21□□□□□ -0.45
NLRP3-204ENST00000366497 CHGAP10645 457 aaKnown RBP12.2□□□□□ -0.46
NLRP3-204ENST00000366497 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
NLRP3-204ENST00000366497 FKBP8Q14318 412 aa12.18□□□□□ -0.46
NLRP3-204ENST00000366497 KIF21BO75037 1637 aa12.18□□□□□ -0.46
NLRP3-204ENST00000366497 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
NLRP3-204ENST00000366497 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
NLRP3-204ENST00000366497 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
NLRP3-204ENST00000366497 CUX1P39880 1505 aa12.14□□□□□ -0.47
NLRP3-204ENST00000366497 NESP48681 1621 aa12.14□□□□□ -0.47
NLRP3-204ENST00000366497 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
NLRP3-204ENST00000366497 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
NLRP3-204ENST00000366497 PRXQ9BXM0 1461 aa12.13□□□□□ -0.47
NLRP3-204ENST00000366497 CARMIL2Q6F5E8 1435 aa12.13□□□□□ -0.47
NLRP3-204ENST00000366497 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
NLRP3-204ENST00000366497 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
NLRP3-204ENST00000366497 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
NLRP3-204ENST00000366497 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
NLRP3-204ENST00000366497 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
NLRP3-204ENST00000366497 FOXD1Q16676 465 aa12.12□□□□□ -0.47
NLRP3-204ENST00000366497 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
NLRP3-204ENST00000366497 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
NLRP3-204ENST00000366497 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
NLRP3-204ENST00000366497 PEG3Q9GZU2 1588 aa12.11□□□□□ -0.47
NLRP3-204ENST00000366497 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
NLRP3-204ENST00000366497 DAXXQ9UER7 740 aaPredicted RBP12.08□□□□□ -0.48
NLRP3-204ENST00000366497 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
NLRP3-204ENST00000366497 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
NLRP3-204ENST00000366497 PPP1R15AO75807 674 aaPredicted RBP12.07□□□□□ -0.48
NLRP3-204ENST00000366497 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
NLRP3-204ENST00000366497 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
NLRP3-204ENST00000366497 PKD2Q13563 968 aa12.05□□□□□ -0.48
NLRP3-204ENST00000366497 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
NLRP3-204ENST00000366497 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
NLRP3-204ENST00000366497 POLA1P09884 1462 aaPredicted RBP12.04□□□□□ -0.48
NLRP3-204ENST00000366497 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
NLRP3-204ENST00000366497 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.49
NLRP3-204ENST00000366497 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
NLRP3-204ENST00000366497 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
NLRP3-204ENST00000366497 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
NLRP3-204ENST00000366497 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
NLRP3-204ENST00000366497 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
NLRP3-204ENST00000366497 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
NLRP3-204ENST00000366497 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
NLRP3-204ENST00000366497 NUP155O75694 1391 aa11.99□□□□□ -0.49
NLRP3-204ENST00000366497 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
NLRP3-204ENST00000366497 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
NLRP3-204ENST00000366497 CANXP27824 592 aaKnown RBP11.98□□□□□ -0.49
NLRP3-204ENST00000366497 CASKIN1Q8WXD9 1431 aa11.98□□□□□ -0.49
NLRP3-204ENST00000366497 FGD6Q6ZV73 1430 aa11.97□□□□□ -0.49
NLRP3-204ENST00000366497 PLPPR3Q6T4P5 718 aa11.96□□□□□ -0.49
NLRP3-204ENST00000366497 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
NLRP3-204ENST00000366497 RRBP1Q9P2E9 1410 aaKnown RBP11.95□□□□□ -0.5
NLRP3-204ENST00000366497 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
NLRP3-204ENST00000366497 DNMBPQ6XZF7 1577 aa11.95□□□□□ -0.5
NLRP3-204ENST00000366497 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
NLRP3-204ENST00000366497 NEFMP07197 916 aa11.95□□□□□ -0.5
NLRP3-204ENST00000366497 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
NLRP3-204ENST00000366497 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
NLRP3-204ENST00000366497 PTPRGP23470 1445 aa11.94□□□□□ -0.5
NLRP3-204ENST00000366497 CCER2I3L3R5 266 aa11.93□□□□□ -0.5
NLRP3-204ENST00000366497 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
NLRP3-204ENST00000366497 FYCO1Q9BQS8 1478 aa11.91□□□□□ -0.5
NLRP3-204ENST00000366497 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
NLRP3-204ENST00000366497 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
NLRP3-204ENST00000366497 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
NLRP3-204ENST00000366497 NCOA2Q15596 1464 aa11.9□□□□□ -0.5
NLRP3-204ENST00000366497 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
NLRP3-204ENST00000366497 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.5
NLRP3-204ENST00000366497 CDCA8Q53HL2 280 aa11.9□□□□□ -0.51
NLRP3-204ENST00000366497 PRKCSHP14314 528 aaPredicted RBP11.89□□□□□ -0.51
NLRP3-204ENST00000366497 EFCAB5A4FU69 1503 aa11.88□□□□□ -0.51
NLRP3-204ENST00000366497 RTL5Q5HYW3 569 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms