RNA–Protein interactions for RNA: ENST00000365347.1

RN7SKP47-201, Transcript of RNA, 7SK small nuclear pseudogene 47, humanhuman

BASIC

Gene RN7SKP47, Length 328 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP47-201ENST00000365347 WDR62O43379 1518 aa11.37□□□□□ -0.59
RN7SKP47-201ENST00000365347 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
RN7SKP47-201ENST00000365347 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
RN7SKP47-201ENST00000365347 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
RN7SKP47-201ENST00000365347 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
RN7SKP47-201ENST00000365347 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
RN7SKP47-201ENST00000365347 CUX2O14529 1486 aa11.33□□□□□ -0.6
RN7SKP47-201ENST00000365347 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
RN7SKP47-201ENST00000365347 TARBP1Q13395 1621 aaKnown RBP11.3□□□□□ -0.6
RN7SKP47-201ENST00000365347 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
RN7SKP47-201ENST00000365347 IGF1RP08069 1367 aa11.28□□□□□ -0.6
RN7SKP47-201ENST00000365347 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
RN7SKP47-201ENST00000365347 WDR97A6NE52 1622 aa11.27□□□□□ -0.6
RN7SKP47-201ENST00000365347 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
RN7SKP47-201ENST00000365347 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
RN7SKP47-201ENST00000365347 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
RN7SKP47-201ENST00000365347 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
RN7SKP47-201ENST00000365347 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.61
RN7SKP47-201ENST00000365347 KIF21BO75037 1637 aa11.22□□□□□ -0.61
RN7SKP47-201ENST00000365347 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
RN7SKP47-201ENST00000365347 GOLGA3Q08378 1498 aa11.21□□□□□ -0.61
RN7SKP47-201ENST00000365347 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.61
RN7SKP47-201ENST00000365347 ZNF608Q9ULD9 1512 aaPredicted RBP11.2□□□□□ -0.62
RN7SKP47-201ENST00000365347 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
RN7SKP47-201ENST00000365347 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
RN7SKP47-201ENST00000365347 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
RN7SKP47-201ENST00000365347 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
RN7SKP47-201ENST00000365347 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
RN7SKP47-201ENST00000365347 TNIKQ9UKE5 1360 aa11.17□□□□□ -0.62
RN7SKP47-201ENST00000365347 POLA2Q14181 598 aa11.16□□□□□ -0.62
RN7SKP47-201ENST00000365347 CUL7Q14999 1698 aa11.15□□□□□ -0.62
RN7SKP47-201ENST00000365347 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
RN7SKP47-201ENST00000365347 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
RN7SKP47-201ENST00000365347 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
RN7SKP47-201ENST00000365347 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
RN7SKP47-201ENST00000365347 MAGI1Q96QZ7 1491 aaPredicted RBP11.09□□□□□ -0.63
RN7SKP47-201ENST00000365347 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
RN7SKP47-201ENST00000365347 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
RN7SKP47-201ENST00000365347 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
RN7SKP47-201ENST00000365347 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
RN7SKP47-201ENST00000365347 SYNJ2O15056 1496 aa11.05□□□□□ -0.64
RN7SKP47-201ENST00000365347 FBLN2P98095 1184 aa11.04□□□□□ -0.64
RN7SKP47-201ENST00000365347 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
RN7SKP47-201ENST00000365347 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
RN7SKP47-201ENST00000365347 CLIP1P30622 1438 aa11.03□□□□□ -0.64
RN7SKP47-201ENST00000365347 RANGAP1P46060 587 aaPredicted RBP11.03□□□□□ -0.64
RN7SKP47-201ENST00000365347 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
RN7SKP47-201ENST00000365347 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
RN7SKP47-201ENST00000365347 HAX1O00165 279 aa11.02□□□□□ -0.65
RN7SKP47-201ENST00000365347 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
RN7SKP47-201ENST00000365347 EVX2Q03828 476 aa11□□□□□ -0.65
RN7SKP47-201ENST00000365347 CTTNBP2Q8WZ74 1663 aa11□□□□□ -0.65
RN7SKP47-201ENST00000365347 KIAA0586Q9BVV6 1533 aa10.97□□□□□ -0.65
RN7SKP47-201ENST00000365347 ARHGAP35Q9NRY4 1499 aa10.96□□□□□ -0.65
RN7SKP47-201ENST00000365347 NUP160Q12769 1436 aa10.95□□□□□ -0.66
RN7SKP47-201ENST00000365347 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
RN7SKP47-201ENST00000365347 CEP170Q5SW79 1584 aa10.94□□□□□ -0.66
RN7SKP47-201ENST00000365347 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
RN7SKP47-201ENST00000365347 CHD1O14646 1710 aa10.92□□□□□ -0.66
RN7SKP47-201ENST00000365347 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
RN7SKP47-201ENST00000365347 EFCAB5A4FU69 1503 aa10.92□□□□□ -0.66
RN7SKP47-201ENST00000365347 VPS8Q8N3P4 1428 aa10.92□□□□□ -0.66
RN7SKP47-201ENST00000365347 JPH4Q96JJ6 628 aa10.91□□□□□ -0.66
RN7SKP47-201ENST00000365347 UGGT2Q9NYU1 1516 aa10.9□□□□□ -0.66
RN7SKP47-201ENST00000365347 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP47-201ENST00000365347 SAMD9Q5K651 1589 aa10.89□□□□□ -0.67
RN7SKP47-201ENST00000365347 FHOD3Q2V2M9 1422 aa10.88□□□□□ -0.67
RN7SKP47-201ENST00000365347 LHX8Q68G74 356 aa10.88□□□□□ -0.67
RN7SKP47-201ENST00000365347 AKT1S1Q96B36 256 aa10.87□□□□□ -0.67
RN7SKP47-201ENST00000365347 ZBTB22O15209 634 aa10.86□□□□□ -0.67
RN7SKP47-201ENST00000365347 DISP1Q96F81 1524 aa10.85□□□□□ -0.67
RN7SKP47-201ENST00000365347 FMN1Q68DA7 1419 aa10.84□□□□□ -0.67
RN7SKP47-201ENST00000365347 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
RN7SKP47-201ENST00000365347 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
RN7SKP47-201ENST00000365347 KIAA0556O60303 1618 aa10.83□□□□□ -0.68
RN7SKP47-201ENST00000365347 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.68
RN7SKP47-201ENST00000365347 CLASP1Q7Z460 1538 aa10.82□□□□□ -0.68
RN7SKP47-201ENST00000365347 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
RN7SKP47-201ENST00000365347 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
RN7SKP47-201ENST00000365347 ATP1B4Q9UN42 357 aaPredicted RBP10.8□□□□□ -0.68
RN7SKP47-201ENST00000365347 CASKIN1Q8WXD9 1431 aa10.8□□□□□ -0.68
RN7SKP47-201ENST00000365347 FYCO1Q9BQS8 1478 aa10.79□□□□□ -0.68
RN7SKP47-201ENST00000365347 TTBK1Q5TCY1 1321 aaPredicted RBP10.79□□□□□ -0.68
RN7SKP47-201ENST00000365347 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
RN7SKP47-201ENST00000365347 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.68
RN7SKP47-201ENST00000365347 FXR2P51116 673 aaKnown RBP eCLIP10.77□□□□□ -0.69
RN7SKP47-201ENST00000365347 PTPRGP23470 1445 aa10.75□□□□□ -0.69
RN7SKP47-201ENST00000365347 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
RN7SKP47-201ENST00000365347 ATXN8OSP0DMR3 200 aa10.75□□□□□ -0.69
RN7SKP47-201ENST00000365347 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
RN7SKP47-201ENST00000365347 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
RN7SKP47-201ENST00000365347 TRIM26Q12899 539 aaPredicted RBP10.73□□□□□ -0.69
RN7SKP47-201ENST00000365347 TIAM1Q13009 1591 aa10.73□□□□□ -0.69
RN7SKP47-201ENST00000365347 PLB1Q6P1J6 1458 aa10.72□□□□□ -0.69
RN7SKP47-201ENST00000365347 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
RN7SKP47-201ENST00000365347 RAPGEF6Q8TEU7 1601 aa10.71□□□□□ -0.69
RN7SKP47-201ENST00000365347 CCDC18Q5T9S5 1454 aa10.7□□□□□ -0.7
RN7SKP47-201ENST00000365347 ABCA8O94911 1581 aa10.69□□□□□ -0.7
RN7SKP47-201ENST00000365347 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
RN7SKP47-201ENST00000365347 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms