RNA–Protein interactions for RNA: ENST00000361033.1

TMEM239-201, Transcript of transmembrane protein 239, humanhuman

TSL 2 BASIC

Gene TMEM239, Length 3,892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM239-201ENST00000361033 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
TMEM239-201ENST00000361033 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
TMEM239-201ENST00000361033 IGF1RP08069 1367 aa17.02■□□□□ 0.32
TMEM239-201ENST00000361033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.31
TMEM239-201ENST00000361033 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
TMEM239-201ENST00000361033 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
TMEM239-201ENST00000361033 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
TMEM239-201ENST00000361033 NCAPD3P42695 1498 aa17■□□□□ 0.31
TMEM239-201ENST00000361033 FOXD1Q16676 465 aa17■□□□□ 0.31
TMEM239-201ENST00000361033 FKBP8Q14318 412 aa17■□□□□ 0.31
TMEM239-201ENST00000361033 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
TMEM239-201ENST00000361033 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
TMEM239-201ENST00000361033 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
TMEM239-201ENST00000361033 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
TMEM239-201ENST00000361033 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM239-201ENST00000361033 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
TMEM239-201ENST00000361033 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
TMEM239-201ENST00000361033 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
TMEM239-201ENST00000361033 KIF21BO75037 1637 aa16.95■□□□□ 0.3
TMEM239-201ENST00000361033 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
TMEM239-201ENST00000361033 NESP48681 1621 aa16.93■□□□□ 0.3
TMEM239-201ENST00000361033 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
TMEM239-201ENST00000361033 DHX57Q6P158 1386 aaKnown RBP16.92■□□□□ 0.3
TMEM239-201ENST00000361033 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
TMEM239-201ENST00000361033 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
TMEM239-201ENST00000361033 SETD5Q9C0A6 1442 aa16.91■□□□□ 0.3
TMEM239-201ENST00000361033 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
TMEM239-201ENST00000361033 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
TMEM239-201ENST00000361033 ERCC6Q03468 1493 aa16.89■□□□□ 0.3
TMEM239-201ENST00000361033 CUX1P39880 1505 aa16.88■□□□□ 0.29
TMEM239-201ENST00000361033 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
TMEM239-201ENST00000361033 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
TMEM239-201ENST00000361033 CFTRP13569 1480 aa16.87■□□□□ 0.29
TMEM239-201ENST00000361033 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
TMEM239-201ENST00000361033 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
TMEM239-201ENST00000361033 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
TMEM239-201ENST00000361033 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
TMEM239-201ENST00000361033 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
TMEM239-201ENST00000361033 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
TMEM239-201ENST00000361033 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
TMEM239-201ENST00000361033 PHLDB1Q86UU1 1377 aa16.8■□□□□ 0.28
TMEM239-201ENST00000361033 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
TMEM239-201ENST00000361033 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
TMEM239-201ENST00000361033 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
TMEM239-201ENST00000361033 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
TMEM239-201ENST00000361033 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
TMEM239-201ENST00000361033 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
TMEM239-201ENST00000361033 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
TMEM239-201ENST00000361033 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
TMEM239-201ENST00000361033 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
TMEM239-201ENST00000361033 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
TMEM239-201ENST00000361033 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
TMEM239-201ENST00000361033 ZNF644Q9H582 1327 aaPredicted RBP16.68■□□□□ 0.26
TMEM239-201ENST00000361033 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
TMEM239-201ENST00000361033 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
TMEM239-201ENST00000361033 L3MBTL2Q969R5 705 aa16.66■□□□□ 0.26
TMEM239-201ENST00000361033 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
TMEM239-201ENST00000361033 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
TMEM239-201ENST00000361033 PKD2Q13563 968 aa16.65■□□□□ 0.26
TMEM239-201ENST00000361033 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
TMEM239-201ENST00000361033 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
TMEM239-201ENST00000361033 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
TMEM239-201ENST00000361033 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
TMEM239-201ENST00000361033 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.25
TMEM239-201ENST00000361033 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
TMEM239-201ENST00000361033 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM239-201ENST00000361033 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
TMEM239-201ENST00000361033 RRBP1Q9P2E9 1410 aaKnown RBP16.56■□□□□ 0.24
TMEM239-201ENST00000361033 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
TMEM239-201ENST00000361033 FGD6Q6ZV73 1430 aa16.55■□□□□ 0.24
TMEM239-201ENST00000361033 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
TMEM239-201ENST00000361033 NUP155O75694 1391 aa16.52■□□□□ 0.23
TMEM239-201ENST00000361033 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
TMEM239-201ENST00000361033 CASKIN1Q8WXD9 1431 aa16.49■□□□□ 0.23
TMEM239-201ENST00000361033 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
TMEM239-201ENST00000361033 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
TMEM239-201ENST00000361033 NCOA2Q15596 1464 aa16.47■□□□□ 0.23
TMEM239-201ENST00000361033 CC2D1BQ5T0F9 858 aaKnown RBP16.47■□□□□ 0.23
TMEM239-201ENST00000361033 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
TMEM239-201ENST00000361033 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
TMEM239-201ENST00000361033 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
TMEM239-201ENST00000361033 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
TMEM239-201ENST00000361033 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
TMEM239-201ENST00000361033 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
TMEM239-201ENST00000361033 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
TMEM239-201ENST00000361033 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
TMEM239-201ENST00000361033 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
TMEM239-201ENST00000361033 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
TMEM239-201ENST00000361033 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
TMEM239-201ENST00000361033 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
TMEM239-201ENST00000361033 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
TMEM239-201ENST00000361033 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
TMEM239-201ENST00000361033 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
TMEM239-201ENST00000361033 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
TMEM239-201ENST00000361033 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
TMEM239-201ENST00000361033 MYT1Q01538 1121 aa16.36■□□□□ 0.21
TMEM239-201ENST00000361033 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMEM239-201ENST00000361033 ST20-MTHFSA0A0A6YYL1 179 aa16.35■□□□□ 0.21
TMEM239-201ENST00000361033 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
TMEM239-201ENST00000361033 CDK13Q14004 1512 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms