RNA–Protein interactions for RNA: ENST00000360663.9

PPP3CB-202, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PPP3CB, Length 3,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-202ENST00000360663 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
PPP3CB-202ENST00000360663 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
PPP3CB-202ENST00000360663 IGF1RP08069 1367 aa13.68□□□□□ -0.22
PPP3CB-202ENST00000360663 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
PPP3CB-202ENST00000360663 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
PPP3CB-202ENST00000360663 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
PPP3CB-202ENST00000360663 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
PPP3CB-202ENST00000360663 ARID3CA6NKF2 412 aa13.62□□□□□ -0.23
PPP3CB-202ENST00000360663 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
PPP3CB-202ENST00000360663 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
PPP3CB-202ENST00000360663 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
PPP3CB-202ENST00000360663 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
PPP3CB-202ENST00000360663 TONSLQ96HA7 1378 aa13.6□□□□□ -0.23
PPP3CB-202ENST00000360663 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
PPP3CB-202ENST00000360663 FHOD3Q2V2M9 1422 aa13.6□□□□□ -0.23
PPP3CB-202ENST00000360663 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
PPP3CB-202ENST00000360663 NCAPD3P42695 1498 aa13.58□□□□□ -0.24
PPP3CB-202ENST00000360663 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
PPP3CB-202ENST00000360663 CFTRP13569 1480 aa13.57□□□□□ -0.24
PPP3CB-202ENST00000360663 RBM19Q9Y4C8 960 aaKnown RBP13.56□□□□□ -0.24
PPP3CB-202ENST00000360663 RRP7BPQ9NSQ0 103 aa13.55□□□□□ -0.24
PPP3CB-202ENST00000360663 TIAM1Q13009 1591 aa13.54□□□□□ -0.24
PPP3CB-202ENST00000360663 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
PPP3CB-202ENST00000360663 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.25
PPP3CB-202ENST00000360663 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
PPP3CB-202ENST00000360663 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
PPP3CB-202ENST00000360663 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
PPP3CB-202ENST00000360663 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
PPP3CB-202ENST00000360663 CCER2I3L3R5 266 aa13.49□□□□□ -0.25
PPP3CB-202ENST00000360663 FOXD1Q16676 465 aa13.48□□□□□ -0.25
PPP3CB-202ENST00000360663 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
PPP3CB-202ENST00000360663 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
PPP3CB-202ENST00000360663 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
PPP3CB-202ENST00000360663 HMGXB3Q12766 1538 aa13.46□□□□□ -0.26
PPP3CB-202ENST00000360663 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
PPP3CB-202ENST00000360663 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
PPP3CB-202ENST00000360663 PCF11O94913 1555 aaKnown RBP13.43□□□□□ -0.26
PPP3CB-202ENST00000360663 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
PPP3CB-202ENST00000360663 TDRD9Q8NDG6 1382 aaKnown RBP13.42□□□□□ -0.26
PPP3CB-202ENST00000360663 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
PPP3CB-202ENST00000360663 CCDC18Q5T9S5 1454 aa13.4□□□□□ -0.26
PPP3CB-202ENST00000360663 PTPRKQ15262 1439 aa13.4□□□□□ -0.27
PPP3CB-202ENST00000360663 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
PPP3CB-202ENST00000360663 ZNF326Q5BKZ1 582 aaKnown RBP13.39□□□□□ -0.27
PPP3CB-202ENST00000360663 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
PPP3CB-202ENST00000360663 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
PPP3CB-202ENST00000360663 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
PPP3CB-202ENST00000360663 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
PPP3CB-202ENST00000360663 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
PPP3CB-202ENST00000360663 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
PPP3CB-202ENST00000360663 MSH5O43196 834 aa13.35□□□□□ -0.27
PPP3CB-202ENST00000360663 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
PPP3CB-202ENST00000360663 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
PPP3CB-202ENST00000360663 L3MBTL2Q969R5 705 aa13.35□□□□□ -0.27
PPP3CB-202ENST00000360663 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPP3CB-202ENST00000360663 NESP48681 1621 aa13.34□□□□□ -0.27
PPP3CB-202ENST00000360663 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
PPP3CB-202ENST00000360663 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
PPP3CB-202ENST00000360663 UACAQ9BZF9 1416 aa13.33□□□□□ -0.28
PPP3CB-202ENST00000360663 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
PPP3CB-202ENST00000360663 MPHOSPH9Q99550 1183 aa13.31□□□□□ -0.28
PPP3CB-202ENST00000360663 NAIPQ13075 1403 aa13.3□□□□□ -0.28
PPP3CB-202ENST00000360663 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
PPP3CB-202ENST00000360663 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
PPP3CB-202ENST00000360663 NCOA2Q15596 1464 aa13.29□□□□□ -0.28
PPP3CB-202ENST00000360663 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.28
PPP3CB-202ENST00000360663 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.29
PPP3CB-202ENST00000360663 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
PPP3CB-202ENST00000360663 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
PPP3CB-202ENST00000360663 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
PPP3CB-202ENST00000360663 PPP4R2Q9NY27 417 aa13.25□□□□□ -0.29
PPP3CB-202ENST00000360663 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
PPP3CB-202ENST00000360663 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
PPP3CB-202ENST00000360663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
PPP3CB-202ENST00000360663 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
PPP3CB-202ENST00000360663 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
PPP3CB-202ENST00000360663 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
PPP3CB-202ENST00000360663 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
PPP3CB-202ENST00000360663 NBR1Q14596 966 aa13.22□□□□□ -0.29
PPP3CB-202ENST00000360663 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
PPP3CB-202ENST00000360663 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
PPP3CB-202ENST00000360663 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
PPP3CB-202ENST00000360663 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
PPP3CB-202ENST00000360663 CCDC7Q96M83 1385 aa13.18□□□□□ -0.3
PPP3CB-202ENST00000360663 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
PPP3CB-202ENST00000360663 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
PPP3CB-202ENST00000360663 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
PPP3CB-202ENST00000360663 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
PPP3CB-202ENST00000360663 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
PPP3CB-202ENST00000360663 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
PPP3CB-202ENST00000360663 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
PPP3CB-202ENST00000360663 FBLN2P98095 1184 aa13.14□□□□□ -0.31
PPP3CB-202ENST00000360663 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
PPP3CB-202ENST00000360663 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
PPP3CB-202ENST00000360663 CDK13Q14004 1512 aaKnown RBP13.12□□□□□ -0.31
PPP3CB-202ENST00000360663 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
PPP3CB-202ENST00000360663 URB2Q14146 1524 aaKnown RBP13.12□□□□□ -0.31
PPP3CB-202ENST00000360663 MAGI3Q5TCQ9 1506 aa13.11□□□□□ -0.31
PPP3CB-202ENST00000360663 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
PPP3CB-202ENST00000360663 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms