RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
CCDC196-201ENST00000359454 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
CCDC196-201ENST00000359454 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
CCDC196-201ENST00000359454 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
CCDC196-201ENST00000359454 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
CCDC196-201ENST00000359454 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
CCDC196-201ENST00000359454 CHD1O14646 1710 aa11.75□□□□□ -0.53
CCDC196-201ENST00000359454 FBLN2P98095 1184 aa11.74□□□□□ -0.53
CCDC196-201ENST00000359454 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
CCDC196-201ENST00000359454 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
CCDC196-201ENST00000359454 SOGA1O94964 1423 aa11.69□□□□□ -0.54
CCDC196-201ENST00000359454 RAD54L2Q9Y4B4 1467 aa11.68□□□□□ -0.54
CCDC196-201ENST00000359454 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
CCDC196-201ENST00000359454 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
CCDC196-201ENST00000359454 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
CCDC196-201ENST00000359454 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
CCDC196-201ENST00000359454 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
CCDC196-201ENST00000359454 POLA2Q14181 598 aa11.63□□□□□ -0.55
CCDC196-201ENST00000359454 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
CCDC196-201ENST00000359454 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
CCDC196-201ENST00000359454 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
CCDC196-201ENST00000359454 ABCB7O75027 752 aa11.61□□□□□ -0.55
CCDC196-201ENST00000359454 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
CCDC196-201ENST00000359454 CUX1P39880 1505 aa11.59□□□□□ -0.55
CCDC196-201ENST00000359454 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
CCDC196-201ENST00000359454 DSG3P32926 999 aa11.56□□□□□ -0.56
CCDC196-201ENST00000359454 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
CCDC196-201ENST00000359454 PBRM1Q86U86 1689 aa11.52□□□□□ -0.57
CCDC196-201ENST00000359454 ABCA10Q8WWZ4 1543 aa11.5□□□□□ -0.57
CCDC196-201ENST00000359454 FKBP8Q14318 412 aa11.49□□□□□ -0.57
CCDC196-201ENST00000359454 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
CCDC196-201ENST00000359454 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
CCDC196-201ENST00000359454 MKRN4PQ13434 485 aaPredicted RBP11.46□□□□□ -0.57
CCDC196-201ENST00000359454 GRIN2AQ12879 1464 aa11.44□□□□□ -0.58
CCDC196-201ENST00000359454 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CCDC196-201ENST00000359454 ERCC6L2Q5T890 1561 aa11.42□□□□□ -0.58
CCDC196-201ENST00000359454 NUP160Q12769 1436 aa11.42□□□□□ -0.58
CCDC196-201ENST00000359454 ADAMTS12P58397 1594 aa11.41□□□□□ -0.58
CCDC196-201ENST00000359454 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
CCDC196-201ENST00000359454 POTEHQ6S545 545 aa11.4□□□□□ -0.58
CCDC196-201ENST00000359454 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
CCDC196-201ENST00000359454 SHROOM2Q13796 1616 aa11.38□□□□□ -0.59
CCDC196-201ENST00000359454 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
CCDC196-201ENST00000359454 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
CCDC196-201ENST00000359454 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
CCDC196-201ENST00000359454 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
CCDC196-201ENST00000359454 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.6
CCDC196-201ENST00000359454 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
CCDC196-201ENST00000359454 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
CCDC196-201ENST00000359454 KIF13AQ9H1H9 1805 aa11.29□□□□□ -0.6
CCDC196-201ENST00000359454 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC196-201ENST00000359454 FAM69CQ0P6D2 419 aa11.26□□□□□ -0.61
CCDC196-201ENST00000359454 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
CCDC196-201ENST00000359454 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
CCDC196-201ENST00000359454 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
CCDC196-201ENST00000359454 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
CCDC196-201ENST00000359454 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
CCDC196-201ENST00000359454 KIAA0586Q9BVV6 1533 aa11.19□□□□□ -0.62
CCDC196-201ENST00000359454 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
CCDC196-201ENST00000359454 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
CCDC196-201ENST00000359454 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
CCDC196-201ENST00000359454 KDM6BO15054 1643 aa11.17□□□□□ -0.62
CCDC196-201ENST00000359454 IGF1RP08069 1367 aa11.16□□□□□ -0.62
CCDC196-201ENST00000359454 KIF27Q86VH2 1401 aa11.16□□□□□ -0.62
CCDC196-201ENST00000359454 CUL7Q14999 1698 aa11.15□□□□□ -0.62
CCDC196-201ENST00000359454 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
CCDC196-201ENST00000359454 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
CCDC196-201ENST00000359454 PTPRGP23470 1445 aa11.13□□□□□ -0.63
CCDC196-201ENST00000359454 PROM2Q8N271 834 aa11.12□□□□□ -0.63
CCDC196-201ENST00000359454 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
CCDC196-201ENST00000359454 CARMIL2Q6F5E8 1435 aa11.1□□□□□ -0.63
CCDC196-201ENST00000359454 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
CCDC196-201ENST00000359454 CARMIL1Q5VZK9 1371 aa11.09□□□□□ -0.63
CCDC196-201ENST00000359454 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
CCDC196-201ENST00000359454 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
CCDC196-201ENST00000359454 PLB1Q6P1J6 1458 aa11.08□□□□□ -0.64
CCDC196-201ENST00000359454 TTBK1Q5TCY1 1321 aaPredicted RBP11.08□□□□□ -0.64
CCDC196-201ENST00000359454 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
CCDC196-201ENST00000359454 GLI2P10070 1586 aa11.07□□□□□ -0.64
CCDC196-201ENST00000359454 UHRF1BP1LA0JNW5 1464 aa11.06□□□□□ -0.64
CCDC196-201ENST00000359454 IQGAP2Q13576 1575 aa11.05□□□□□ -0.64
CCDC196-201ENST00000359454 UACAQ9BZF9 1416 aa11.04□□□□□ -0.64
CCDC196-201ENST00000359454 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
CCDC196-201ENST00000359454 RBM42Q9BTD8 480 aaKnown RBP11.03□□□□□ -0.64
CCDC196-201ENST00000359454 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.64
CCDC196-201ENST00000359454 DISP1Q96F81 1524 aa11.01□□□□□ -0.65
CCDC196-201ENST00000359454 ADGRL1O94910 1474 aa11□□□□□ -0.65
CCDC196-201ENST00000359454 EPRSP07814 1512 aaKnown RBP11□□□□□ -0.65
CCDC196-201ENST00000359454 KDM5BQ9UGL1 1544 aa11□□□□□ -0.65
CCDC196-201ENST00000359454 TEX14Q8IWB6 1497 aa11□□□□□ -0.65
CCDC196-201ENST00000359454 ILDR1Q86SU0 546 aaPredicted RBP10.99□□□□□ -0.65
CCDC196-201ENST00000359454 UGGT2Q9NYU1 1516 aa10.99□□□□□ -0.65
CCDC196-201ENST00000359454 MAP3K4Q9Y6R4 1608 aa10.98□□□□□ -0.65
CCDC196-201ENST00000359454 COL17A1Q9UMD9 1497 aaPredicted RBP10.98□□□□□ -0.65
CCDC196-201ENST00000359454 RAPGEF2Q9Y4G8 1499 aa10.97□□□□□ -0.65
CCDC196-201ENST00000359454 ZCCHC11Q5TAX3 1644 aaKnown RBP10.96□□□□□ -0.65
CCDC196-201ENST00000359454 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
CCDC196-201ENST00000359454 WDR7Q9Y4E6 1490 aa10.93□□□□□ -0.66
CCDC196-201ENST00000359454 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
CCDC196-201ENST00000359454 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms