RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
TNFSF11-202ENST00000358545 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
TNFSF11-202ENST00000358545 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.44
TNFSF11-202ENST00000358545 CAPN15O75808 1086 aa12.26□□□□□ -0.45
TNFSF11-202ENST00000358545 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
TNFSF11-202ENST00000358545 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
TNFSF11-202ENST00000358545 TARBP1Q13395 1621 aaKnown RBP12.2□□□□□ -0.46
TNFSF11-202ENST00000358545 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
TNFSF11-202ENST00000358545 FBLN2P98095 1184 aa12.2□□□□□ -0.46
TNFSF11-202ENST00000358545 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
TNFSF11-202ENST00000358545 POLA2Q14181 598 aa12.17□□□□□ -0.46
TNFSF11-202ENST00000358545 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
TNFSF11-202ENST00000358545 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
TNFSF11-202ENST00000358545 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
TNFSF11-202ENST00000358545 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
TNFSF11-202ENST00000358545 ABCB7O75027 752 aa12.11□□□□□ -0.47
TNFSF11-202ENST00000358545 SNAPC4Q5SXM2 1469 aa12.09□□□□□ -0.47
TNFSF11-202ENST00000358545 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
TNFSF11-202ENST00000358545 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.48
TNFSF11-202ENST00000358545 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
TNFSF11-202ENST00000358545 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
TNFSF11-202ENST00000358545 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
TNFSF11-202ENST00000358545 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
TNFSF11-202ENST00000358545 KIF13AQ9H1H9 1805 aa12.03□□□□□ -0.48
TNFSF11-202ENST00000358545 TDRD9Q8NDG6 1382 aaKnown RBP12.03□□□□□ -0.48
TNFSF11-202ENST00000358545 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
TNFSF11-202ENST00000358545 MAGI1Q96QZ7 1491 aaPredicted RBP12.01□□□□□ -0.49
TNFSF11-202ENST00000358545 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
TNFSF11-202ENST00000358545 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
TNFSF11-202ENST00000358545 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
TNFSF11-202ENST00000358545 DSG3P32926 999 aa11.99□□□□□ -0.49
TNFSF11-202ENST00000358545 SOGA1O94964 1423 aa11.98□□□□□ -0.49
TNFSF11-202ENST00000358545 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
TNFSF11-202ENST00000358545 ERCC6L2Q5T890 1561 aa11.97□□□□□ -0.49
TNFSF11-202ENST00000358545 PROM2Q8N271 834 aa11.96□□□□□ -0.5
TNFSF11-202ENST00000358545 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
TNFSF11-202ENST00000358545 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
TNFSF11-202ENST00000358545 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
TNFSF11-202ENST00000358545 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
TNFSF11-202ENST00000358545 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
TNFSF11-202ENST00000358545 CUX1P39880 1505 aa11.86□□□□□ -0.51
TNFSF11-202ENST00000358545 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
TNFSF11-202ENST00000358545 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
TNFSF11-202ENST00000358545 SHROOM2Q13796 1616 aa11.84□□□□□ -0.51
TNFSF11-202ENST00000358545 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
TNFSF11-202ENST00000358545 GRIN2AQ12879 1464 aa11.82□□□□□ -0.52
TNFSF11-202ENST00000358545 KDM6BO15054 1643 aa11.82□□□□□ -0.52
TNFSF11-202ENST00000358545 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
TNFSF11-202ENST00000358545 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
TNFSF11-202ENST00000358545 DIP2BQ9P265 1576 aa11.8□□□□□ -0.52
TNFSF11-202ENST00000358545 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
TNFSF11-202ENST00000358545 NUP160Q12769 1436 aa11.78□□□□□ -0.52
TNFSF11-202ENST00000358545 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
TNFSF11-202ENST00000358545 FAM69CQ0P6D2 419 aa11.76□□□□□ -0.53
TNFSF11-202ENST00000358545 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
TNFSF11-202ENST00000358545 MAPKBP1O60336 1514 aa11.74□□□□□ -0.53
TNFSF11-202ENST00000358545 HECW2Q9P2P5 1572 aa11.72□□□□□ -0.53
TNFSF11-202ENST00000358545 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.54
TNFSF11-202ENST00000358545 ADCY10Q96PN6 1610 aa11.7□□□□□ -0.54
TNFSF11-202ENST00000358545 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
TNFSF11-202ENST00000358545 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
TNFSF11-202ENST00000358545 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
TNFSF11-202ENST00000358545 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
TNFSF11-202ENST00000358545 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
TNFSF11-202ENST00000358545 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
TNFSF11-202ENST00000358545 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
TNFSF11-202ENST00000358545 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
TNFSF11-202ENST00000358545 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.55
TNFSF11-202ENST00000358545 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.55
TNFSF11-202ENST00000358545 PPRC1Q5VV67 1664 aaKnown RBP11.63□□□□□ -0.55
TNFSF11-202ENST00000358545 PKD2Q13563 968 aa11.63□□□□□ -0.55
TNFSF11-202ENST00000358545 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
TNFSF11-202ENST00000358545 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
TNFSF11-202ENST00000358545 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
TNFSF11-202ENST00000358545 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
TNFSF11-202ENST00000358545 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
TNFSF11-202ENST00000358545 FBXO41Q8TF61 875 aa11.55□□□□□ -0.56
TNFSF11-202ENST00000358545 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
TNFSF11-202ENST00000358545 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
TNFSF11-202ENST00000358545 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
TNFSF11-202ENST00000358545 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
TNFSF11-202ENST00000358545 CUL7Q14999 1698 aa11.53□□□□□ -0.56
TNFSF11-202ENST00000358545 GLI2P10070 1586 aa11.51□□□□□ -0.57
TNFSF11-202ENST00000358545 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
TNFSF11-202ENST00000358545 MAP3K4Q9Y6R4 1608 aa11.49□□□□□ -0.57
TNFSF11-202ENST00000358545 ASXL2Q76L83 1435 aa11.48□□□□□ -0.57
TNFSF11-202ENST00000358545 ABCC2Q92887 1545 aa11.46□□□□□ -0.57
TNFSF11-202ENST00000358545 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
TNFSF11-202ENST00000358545 PLB1Q6P1J6 1458 aa11.45□□□□□ -0.58
TNFSF11-202ENST00000358545 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
TNFSF11-202ENST00000358545 TTBK1Q5TCY1 1321 aaPredicted RBP11.45□□□□□ -0.58
TNFSF11-202ENST00000358545 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
TNFSF11-202ENST00000358545 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
TNFSF11-202ENST00000358545 PTPRGP23470 1445 aa11.43□□□□□ -0.58
TNFSF11-202ENST00000358545 KIF21BO75037 1637 aa11.43□□□□□ -0.58
TNFSF11-202ENST00000358545 TEX14Q8IWB6 1497 aa11.43□□□□□ -0.58
TNFSF11-202ENST00000358545 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
TNFSF11-202ENST00000358545 MIER1Q8N108 512 aa11.41□□□□□ -0.58
TNFSF11-202ENST00000358545 ZCCHC11Q5TAX3 1644 aaKnown RBP11.39□□□□□ -0.59
TNFSF11-202ENST00000358545 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms