RNA–Protein interactions for RNA: ENST00000358385.10

ATL1-201, Transcript of atlastin GTPase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL1, Length 2,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-201ENST00000358385 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
ATL1-201ENST00000358385 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
ATL1-201ENST00000358385 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
ATL1-201ENST00000358385 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
ATL1-201ENST00000358385 NEFLP07196 543 aa14.25□□□□□ -0.13
ATL1-201ENST00000358385 NBR1Q14596 966 aa14.22□□□□□ -0.13
ATL1-201ENST00000358385 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
ATL1-201ENST00000358385 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
ATL1-201ENST00000358385 NESP48681 1621 aa14.21□□□□□ -0.14
ATL1-201ENST00000358385 PRXQ9BXM0 1461 aa14.2□□□□□ -0.14
ATL1-201ENST00000358385 CLIP1P30622 1438 aa14.19□□□□□ -0.14
ATL1-201ENST00000358385 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
ATL1-201ENST00000358385 RANGAP1P46060 587 aaPredicted RBP14.19□□□□□ -0.14
ATL1-201ENST00000358385 PODXL2Q9NZ53 605 aa14.17□□□□□ -0.14
ATL1-201ENST00000358385 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
ATL1-201ENST00000358385 CUX2O14529 1486 aa14.15□□□□□ -0.14
ATL1-201ENST00000358385 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
ATL1-201ENST00000358385 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
ATL1-201ENST00000358385 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
ATL1-201ENST00000358385 IGF1RP08069 1367 aa14.1□□□□□ -0.15
ATL1-201ENST00000358385 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
ATL1-201ENST00000358385 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
ATL1-201ENST00000358385 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
ATL1-201ENST00000358385 NOP58Q9Y2X3 529 aaKnown RBP14.09□□□□□ -0.15
ATL1-201ENST00000358385 TOPBP1Q92547 1522 aa14.08□□□□□ -0.15
ATL1-201ENST00000358385 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
ATL1-201ENST00000358385 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
ATL1-201ENST00000358385 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
ATL1-201ENST00000358385 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
ATL1-201ENST00000358385 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
ATL1-201ENST00000358385 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
ATL1-201ENST00000358385 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.17
ATL1-201ENST00000358385 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
ATL1-201ENST00000358385 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
ATL1-201ENST00000358385 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
ATL1-201ENST00000358385 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.18
ATL1-201ENST00000358385 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
ATL1-201ENST00000358385 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
ATL1-201ENST00000358385 ZMYND15Q9H091 742 aa13.93□□□□□ -0.18
ATL1-201ENST00000358385 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
ATL1-201ENST00000358385 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
ATL1-201ENST00000358385 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
ATL1-201ENST00000358385 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
ATL1-201ENST00000358385 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
ATL1-201ENST00000358385 IRX6P78412 446 aaPredicted RBP13.89□□□□□ -0.19
ATL1-201ENST00000358385 KANK4Q5T7N3 995 aaPredicted RBP13.88□□□□□ -0.19
ATL1-201ENST00000358385 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
ATL1-201ENST00000358385 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
ATL1-201ENST00000358385 CUL7Q14999 1698 aa13.85□□□□□ -0.19
ATL1-201ENST00000358385 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
ATL1-201ENST00000358385 BRPF3Q9ULD4 1205 aa13.85□□□□□ -0.19
ATL1-201ENST00000358385 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
ATL1-201ENST00000358385 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
ATL1-201ENST00000358385 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
ATL1-201ENST00000358385 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
ATL1-201ENST00000358385 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
ATL1-201ENST00000358385 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
ATL1-201ENST00000358385 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
ATL1-201ENST00000358385 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
ATL1-201ENST00000358385 ANP32AP39687 249 aaKnown RBP13.79□□□□□ -0.2
ATL1-201ENST00000358385 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
ATL1-201ENST00000358385 PPP4R2Q9NY27 417 aa13.77□□□□□ -0.21
ATL1-201ENST00000358385 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATL1-201ENST00000358385 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
ATL1-201ENST00000358385 FHAD1B1AJZ9 1412 aa13.75□□□□□ -0.21
ATL1-201ENST00000358385 NEFMP07197 916 aa13.75□□□□□ -0.21
ATL1-201ENST00000358385 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
ATL1-201ENST00000358385 DDX10Q13206 875 aaKnown RBP13.74□□□□□ -0.21
ATL1-201ENST00000358385 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
ATL1-201ENST00000358385 TIAM1Q13009 1591 aa13.73□□□□□ -0.21
ATL1-201ENST00000358385 EFCAB5A4FU69 1503 aa13.73□□□□□ -0.21
ATL1-201ENST00000358385 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
ATL1-201ENST00000358385 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
ATL1-201ENST00000358385 WDR62O43379 1518 aa13.72□□□□□ -0.21
ATL1-201ENST00000358385 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
ATL1-201ENST00000358385 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.21
ATL1-201ENST00000358385 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
ATL1-201ENST00000358385 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
ATL1-201ENST00000358385 MAP3K1Q13233 1512 aa13.71□□□□□ -0.22
ATL1-201ENST00000358385 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
ATL1-201ENST00000358385 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
ATL1-201ENST00000358385 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
ATL1-201ENST00000358385 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
ATL1-201ENST00000358385 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
ATL1-201ENST00000358385 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
ATL1-201ENST00000358385 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
ATL1-201ENST00000358385 CCNB3Q8WWL7 1395 aa13.67□□□□□ -0.22
ATL1-201ENST00000358385 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
ATL1-201ENST00000358385 FYCO1Q9BQS8 1478 aa13.66□□□□□ -0.22
ATL1-201ENST00000358385 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
ATL1-201ENST00000358385 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
ATL1-201ENST00000358385 SAMD9Q5K651 1589 aa13.65□□□□□ -0.22
ATL1-201ENST00000358385 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
ATL1-201ENST00000358385 CFAP43Q8NDM7 1665 aa13.64□□□□□ -0.23
ATL1-201ENST00000358385 GSE1Q14687 1217 aa13.64□□□□□ -0.23
ATL1-201ENST00000358385 ANP32CO43423 234 aa13.63□□□□□ -0.23
ATL1-201ENST00000358385 RBM10P98175 930 aaKnown RBP13.63□□□□□ -0.23
ATL1-201ENST00000358385 PHLDB1Q86UU1 1377 aa13.63□□□□□ -0.23
ATL1-201ENST00000358385 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
ATL1-201ENST00000358385 FGD1P98174 961 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms