RNA–Protein interactions for RNA: ENST00000357903.7

APP-204, Transcript of amyloid beta precursor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APP, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-204ENST00000357903 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
APP-204ENST00000357903 TRIM52Q96A61 297 aa23.28■■□□□ 1.32
APP-204ENST00000357903 MTUS2Q5JR59 1369 aa23.26■■□□□ 1.31
APP-204ENST00000357903 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
APP-204ENST00000357903 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
APP-204ENST00000357903 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
APP-204ENST00000357903 CNGB1Q14028 1251 aaPredicted RBP23.18■■□□□ 1.3
APP-204ENST00000357903 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
APP-204ENST00000357903 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
APP-204ENST00000357903 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
APP-204ENST00000357903 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
APP-204ENST00000357903 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
APP-204ENST00000357903 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
APP-204ENST00000357903 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
APP-204ENST00000357903 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
APP-204ENST00000357903 DDX10Q13206 875 aaKnown RBP23.08■■□□□ 1.29
APP-204ENST00000357903 PHLDB1Q86UU1 1377 aa23.08■■□□□ 1.29
APP-204ENST00000357903 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.28
APP-204ENST00000357903 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
APP-204ENST00000357903 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
APP-204ENST00000357903 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
APP-204ENST00000357903 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
APP-204ENST00000357903 SETD5Q9C0A6 1442 aa22.95■■□□□ 1.26
APP-204ENST00000357903 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
APP-204ENST00000357903 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
APP-204ENST00000357903 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
APP-204ENST00000357903 FOXD1Q16676 465 aa22.91■■□□□ 1.26
APP-204ENST00000357903 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
APP-204ENST00000357903 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
APP-204ENST00000357903 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
APP-204ENST00000357903 FMN1Q68DA7 1419 aa22.88■■□□□ 1.25
APP-204ENST00000357903 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
APP-204ENST00000357903 TIAM1Q13009 1591 aa22.82■■□□□ 1.24
APP-204ENST00000357903 KCNH8Q96L42 1107 aa22.81■■□□□ 1.24
APP-204ENST00000357903 CDK11AQ9UQ88 783 aaPredicted RBP22.81■■□□□ 1.24
APP-204ENST00000357903 PCF11O94913 1555 aaKnown RBP22.79■■□□□ 1.24
APP-204ENST00000357903 BCANQ96GW7 911 aa22.78■■□□□ 1.24
APP-204ENST00000357903 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
APP-204ENST00000357903 ZNF644Q9H582 1327 aaPredicted RBP22.74■■□□□ 1.23
APP-204ENST00000357903 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
APP-204ENST00000357903 CFDP1Q9UEE9 299 aaPredicted RBP22.71■■□□□ 1.23
APP-204ENST00000357903 ANP32CO43423 234 aa22.71■■□□□ 1.23
APP-204ENST00000357903 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.23
APP-204ENST00000357903 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
APP-204ENST00000357903 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
APP-204ENST00000357903 FGD6Q6ZV73 1430 aa22.68■■□□□ 1.22
APP-204ENST00000357903 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
APP-204ENST00000357903 JPH4Q96JJ6 628 aa22.64■■□□□ 1.22
APP-204ENST00000357903 PPP1R15AO75807 674 aaPredicted RBP22.64■■□□□ 1.21
APP-204ENST00000357903 FYCO1Q9BQS8 1478 aa22.63■■□□□ 1.21
APP-204ENST00000357903 NCOA2Q15596 1464 aa22.62■■□□□ 1.21
APP-204ENST00000357903 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
APP-204ENST00000357903 PLEKHD1A6NEE1 506 aa22.62■■□□□ 1.21
APP-204ENST00000357903 SENP3-EIF4A1A0A087X0R7 540 aa22.6■■□□□ 1.21
APP-204ENST00000357903 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
APP-204ENST00000357903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.212e-7■■□□□ 12.4
APP-204ENST00000357903 KDM2AQ9Y2K7 1162 aa22.58■■□□□ 1.21
APP-204ENST00000357903 CDK13Q14004 1512 aaKnown RBP22.56■■□□□ 1.2
APP-204ENST00000357903 GRIN2BQ13224 1484 aa22.56■■□□□ 1.2
APP-204ENST00000357903 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
APP-204ENST00000357903 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
APP-204ENST00000357903 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
APP-204ENST00000357903 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
APP-204ENST00000357903 CUL7Q14999 1698 aa22.53■■□□□ 1.2
APP-204ENST00000357903 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
APP-204ENST00000357903 PTPRKQ15262 1439 aa22.51■■□□□ 1.19
APP-204ENST00000357903 NEFLP07196 543 aa22.51■■□□□ 1.19
APP-204ENST00000357903 TSPY4P0CV99 314 aa22.5■■□□□ 1.19
APP-204ENST00000357903 TSPY10P0CW01 314 aa22.5■■□□□ 1.19
APP-204ENST00000357903 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
APP-204ENST00000357903 WDR97A6NE52 1622 aa22.45■■□□□ 1.19
APP-204ENST00000357903 HNRNPMP52272 730 aaKnown RBP eCLIP22.44■■□□□ 1.181e-6■□□□□ 11.1
APP-204ENST00000357903 EIF4G2P78344 907 aaKnown RBP eCLIP22.44■■□□□ 1.18
APP-204ENST00000357903 HSPA5P11021 654 aaKnown RBP22.44■■□□□ 1.18
APP-204ENST00000357903 PELP1Q8IZL8 1130 aaKnown RBP22.44■■□□□ 1.18
APP-204ENST00000357903 FAM9BQ8IZU0 186 aa22.43■■□□□ 1.18
APP-204ENST00000357903 HNRNPUQ00839 825 aaKnown RBP eCLIP22.43■■□□□ 1.18
APP-204ENST00000357903 RGL3Q3MIN7 710 aa22.43■■□□□ 1.18
APP-204ENST00000357903 FKBP8Q14318 412 aa22.41■■□□□ 1.18
APP-204ENST00000357903 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
APP-204ENST00000357903 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
APP-204ENST00000357903 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
APP-204ENST00000357903 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
APP-204ENST00000357903 CTTNBP2Q8WZ74 1663 aa22.4■■□□□ 1.18
APP-204ENST00000357903 IQGAP2Q13576 1575 aa22.39■■□□□ 1.17
APP-204ENST00000357903 EPRSP07814 1512 aaKnown RBP22.39■■□□□ 1.17
APP-204ENST00000357903 PKD2Q13563 968 aa22.38■■□□□ 1.17
APP-204ENST00000357903 NAIPQ13075 1403 aa22.37■■□□□ 1.17
APP-204ENST00000357903 IRX6P78412 446 aaPredicted RBP22.37■■□□□ 1.17
APP-204ENST00000357903 CARMIL2Q6F5E8 1435 aa22.36■■□□□ 1.17
APP-204ENST00000357903 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
APP-204ENST00000357903 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
APP-204ENST00000357903 UACAQ9BZF9 1416 aa22.34■■□□□ 1.17
APP-204ENST00000357903 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
APP-204ENST00000357903 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
APP-204ENST00000357903 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
APP-204ENST00000357903 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
APP-204ENST00000357903 EHBP1L1Q8N3D4 1523 aa22.28■■□□□ 1.16
APP-204ENST00000357903 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
APP-204ENST00000357903 CFAP43Q8NDM7 1665 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms