RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 PRDM2Q13029 1718 aa33.78■■■■□ 3
NPAS3-203ENST00000357798 TIMELESSQ9UNS1 1208 aa33.75■■■□□ 2.99
NPAS3-203ENST00000357798 CFAP43Q8NDM7 1665 aa33.74■■■□□ 2.99
NPAS3-203ENST00000357798 IGF1RP08069 1367 aa33.69■■■□□ 2.98
NPAS3-203ENST00000357798 PHLDB1Q86UU1 1377 aa33.68■■■□□ 2.98
NPAS3-203ENST00000357798 PPP1R15AO75807 674 aaPredicted RBP33.68■■■□□ 2.98
NPAS3-203ENST00000357798 DDX10Q13206 875 aaKnown RBP33.67■■■□□ 2.98
NPAS3-203ENST00000357798 FKBP8Q14318 412 aa33.66■■■□□ 2.98
NPAS3-203ENST00000357798 FHAD1B1AJZ9 1412 aa33.64■■■□□ 2.98
NPAS3-203ENST00000357798 CCER2I3L3R5 266 aa33.62■■■□□ 2.97
NPAS3-203ENST00000357798 BCANQ96GW7 911 aa33.6■■■□□ 2.97
NPAS3-203ENST00000357798 SIN3AQ96ST3 1273 aa33.6■■■□□ 2.97
NPAS3-203ENST00000357798 CARMIL1Q5VZK9 1371 aa33.57■■■□□ 2.96
NPAS3-203ENST00000357798 PCF11O94913 1555 aaKnown RBP33.56■■■□□ 2.96
NPAS3-203ENST00000357798 NEFLP07196 543 aa33.55■■■□□ 2.96
NPAS3-203ENST00000357798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.52■■■□□ 2.96
NPAS3-203ENST00000357798 FAM50AQ14320 339 aaKnown RBP33.51■■■□□ 2.96
NPAS3-203ENST00000357798 ANP32CO43423 234 aa33.46■■■□□ 2.95
NPAS3-203ENST00000357798 FGD5Q6ZNL6 1462 aa33.42■■■□□ 2.94
NPAS3-203ENST00000357798 FYCO1Q9BQS8 1478 aa33.42■■■□□ 2.94
NPAS3-203ENST00000357798 RBM19Q9Y4C8 960 aaKnown RBP33.38■■■□□ 2.93
NPAS3-203ENST00000357798 AQRO60306 1485 aaKnown RBP eCLIP33.36■■■□□ 2.93
NPAS3-203ENST00000357798 EFCAB5A4FU69 1503 aa33.36■■■□□ 2.93
NPAS3-203ENST00000357798 CASKIN1Q8WXD9 1431 aa33.32■■■□□ 2.92
NPAS3-203ENST00000357798 TRIM52Q96A61 297 aa33.31■■■□□ 2.92
NPAS3-203ENST00000357798 TONSLQ96HA7 1378 aa33.27■■■□□ 2.92
NPAS3-203ENST00000357798 CADPSQ9ULU8 1353 aa33.27■■■□□ 2.92
NPAS3-203ENST00000357798 HIRIP3Q9BW71 556 aaPredicted RBP33.27■■■□□ 2.92
NPAS3-203ENST00000357798 FHOD3Q2V2M9 1422 aa33.25■■■□□ 2.91
NPAS3-203ENST00000357798 CCDC18Q5T9S5 1454 aa33.23■■■□□ 2.91
NPAS3-203ENST00000357798 FGD6Q6ZV73 1430 aa33.23■■■□□ 2.91
NPAS3-203ENST00000357798 UACAQ9BZF9 1416 aa33.21■■■□□ 2.91
NPAS3-203ENST00000357798 HFM1A2PYH4 1435 aa33.18■■■□□ 2.9
NPAS3-203ENST00000357798 P3H3Q8IVL6 736 aa33.18■■■□□ 2.9
NPAS3-203ENST00000357798 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
NPAS3-203ENST00000357798 PTPN23Q9H3S7 1636 aa33.17■■■□□ 2.9
NPAS3-203ENST00000357798 BCL11AQ9H165 835 aa33.17■■■□□ 2.9
NPAS3-203ENST00000357798 ATP1B4Q9UN42 357 aaPredicted RBP33.15■■■□□ 2.9
NPAS3-203ENST00000357798 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
NPAS3-203ENST00000357798 CUL7Q14999 1698 aa33.12■■■□□ 2.89
NPAS3-203ENST00000357798 FMN1Q68DA7 1419 aa33.1■■■□□ 2.89
NPAS3-203ENST00000357798 ABCA10Q8WWZ4 1543 aa33.08■■■□□ 2.89
NPAS3-203ENST00000357798 KDM5BQ9UGL1 1544 aa33.07■■■□□ 2.89
NPAS3-203ENST00000357798 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
NPAS3-203ENST00000357798 PTPRKQ15262 1439 aa33.04■■■□□ 2.88
NPAS3-203ENST00000357798 DNMBPQ6XZF7 1577 aa33.03■■■□□ 2.88
NPAS3-203ENST00000357798 NAIPQ13075 1403 aa33.02■■■□□ 2.88
NPAS3-203ENST00000357798 FANCIQ9NVI1 1328 aa33■■■□□ 2.87
NPAS3-203ENST00000357798 MTUS2Q5JR59 1369 aa32.98■■■□□ 2.87
NPAS3-203ENST00000357798 FANCD2Q9BXW9 1451 aa32.97■■■□□ 2.87
NPAS3-203ENST00000357798 HNRNPUQ00839 825 aaKnown RBP eCLIP32.96■■■□□ 2.87
NPAS3-203ENST00000357798 MSH5O43196 834 aa32.95■■■□□ 2.87
NPAS3-203ENST00000357798 ERICH6BQ5W0A0 696 aa32.95■■■□□ 2.87
NPAS3-203ENST00000357798 MYOM3Q5VTT5 1437 aa32.95■■■□□ 2.86
NPAS3-203ENST00000357798 LRRIQ1Q96JM4 1722 aa32.94■■■□□ 2.86
NPAS3-203ENST00000357798 THOC2Q8NI27 1593 aaKnown RBP32.94■■■□□ 2.86
NPAS3-203ENST00000357798 RAD54L2Q9Y4B4 1467 aa32.92■■■□□ 2.86
NPAS3-203ENST00000357798 SUPT6HQ7KZ85 1726 aaKnown RBP32.92■■■□□ 2.86
NPAS3-203ENST00000357798 CDK11AQ9UQ88 783 aaPredicted RBP32.92■■■□□ 2.86
NPAS3-203ENST00000357798 SAMD9Q5K651 1589 aa32.92■■■□□ 2.86
NPAS3-203ENST00000357798 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
NPAS3-203ENST00000357798 POLA1P09884 1462 aaPredicted RBP32.9■■■□□ 2.86
NPAS3-203ENST00000357798 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
NPAS3-203ENST00000357798 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
NPAS3-203ENST00000357798 HECW1Q76N89 1606 aa32.87■■■□□ 2.85
NPAS3-203ENST00000357798 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
NPAS3-203ENST00000357798 GCC2Q8IWJ2 1684 aa32.85■■■□□ 2.85
NPAS3-203ENST00000357798 WASHC2AQ641Q2 1341 aa32.83■■■□□ 2.85
NPAS3-203ENST00000357798 CNTLNQ9NXG0 1405 aa32.79■■■□□ 2.84
NPAS3-203ENST00000357798 HSPA5P11021 654 aaKnown RBP32.79■■■□□ 2.84
NPAS3-203ENST00000357798 UGGT2Q9NYU1 1516 aa32.79■■■□□ 2.84
NPAS3-203ENST00000357798 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
NPAS3-203ENST00000357798 KIF21AQ7Z4S6 1674 aa32.77■■■□□ 2.84
NPAS3-203ENST00000357798 PPP4R2Q9NY27 417 aa32.75■■■□□ 2.83
NPAS3-203ENST00000357798 AKNAQ7Z591 1439 aa32.75■■■□□ 2.83
NPAS3-203ENST00000357798 IRX6P78412 446 aaPredicted RBP32.75■■■□□ 2.83
NPAS3-203ENST00000357798 TCOF1Q13428 1488 aaKnown RBP32.74■■■□□ 2.83
NPAS3-203ENST00000357798 DENND4BO75064 1496 aaPredicted RBP32.72■■■□□ 2.83
NPAS3-203ENST00000357798 EIF4G2P78344 907 aaKnown RBP eCLIP32.71■■■□□ 2.83
NPAS3-203ENST00000357798 ERICH6Q7L0X2 663 aa32.69■■■□□ 2.82
NPAS3-203ENST00000357798 NCOA1Q15788 1441 aa32.65■■■□□ 2.82
NPAS3-203ENST00000357798 ABCA5Q8WWZ7 1642 aa32.64■■■□□ 2.82
NPAS3-203ENST00000357798 MAGI3Q5TCQ9 1506 aa32.61■■■□□ 2.81
NPAS3-203ENST00000357798 CCDC7Q96M83 1385 aa32.6■■■□□ 2.81
NPAS3-203ENST00000357798 ZBED9Q6R2W3 1325 aa32.59■■■□□ 2.81
NPAS3-203ENST00000357798 MYT1LQ9UL68 1186 aa32.58■■■□□ 2.81
NPAS3-203ENST00000357798 KDM6BO15054 1643 aa32.58■■■□□ 2.81
NPAS3-203ENST00000357798 POLR1AO95602 1720 aaPredicted RBP32.58■■■□□ 2.81
NPAS3-203ENST00000357798 PRKRIP1Q9H875 184 aaPredicted RBP32.58■■■□□ 2.81
NPAS3-203ENST00000357798 RRP7BPQ9NSQ0 103 aa32.57■■■□□ 2.8
NPAS3-203ENST00000357798 CCDC184Q52MB2 194 aa32.57■■■□□ 2.8
NPAS3-203ENST00000357798 MIA2Q96PC5 1412 aa32.5■■■□□ 2.79
NPAS3-203ENST00000357798 L3MBTL2Q969R5 705 aa32.49■■■□□ 2.79
NPAS3-203ENST00000357798 MPHOSPH9Q99550 1183 aa32.49■■■□□ 2.79
NPAS3-203ENST00000357798 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
NPAS3-203ENST00000357798 MRS2Q9HD23 443 aa32.47■■■□□ 2.79
NPAS3-203ENST00000357798 CHIC2Q9UKJ5 165 aa32.47■■■□□ 2.79
NPAS3-203ENST00000357798 URB2Q14146 1524 aaKnown RBP32.47■■■□□ 2.79
NPAS3-203ENST00000357798 C11orf95C9JLR9 678 aaPredicted RBP32.46■■■□□ 2.79
NPAS3-203ENST00000357798 FAM9BQ8IZU0 186 aa32.45■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms