RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 PEG3Q9GZU2 1588 aa5.18□□□□□ -1.58
USP33-201ENST00000357428 CFTRP13569 1480 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 RRP7BPQ9NSQ0 103 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 TOP2BQ02880 1626 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 MIER1Q8N108 512 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 FHOD3Q2V2M9 1422 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 CC2D2AQ9P2K1 1620 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 CUX1P39880 1505 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 RAD54L2Q9Y4B4 1467 aa5.17□□□□□ -1.58
USP33-201ENST00000357428 ANP32CO43423 234 aa5.16□□□□□ -1.58
USP33-201ENST00000357428 HIRIP3Q9BW71 556 aaPredicted RBP5.16□□□□□ -1.58
USP33-201ENST00000357428 DDX10Q13206 875 aaKnown RBP5.15□□□□□ -1.58
USP33-201ENST00000357428 IGF1RP08069 1367 aa5.15□□□□□ -1.58
USP33-201ENST00000357428 NESP48681 1621 aa5.15□□□□□ -1.58
USP33-201ENST00000357428 SIN3AQ96ST3 1273 aa5.14□□□□□ -1.59
USP33-201ENST00000357428 ARHGAP35Q9NRY4 1499 aa5.14□□□□□ -1.59
USP33-201ENST00000357428 SCAF1Q9H7N4 1312 aaKnown RBP5.14□□□□□ -1.59
USP33-201ENST00000357428 ERICH3Q5RHP9 1530 aa5.13□□□□□ -1.59
USP33-201ENST00000357428 BCANQ96GW7 911 aa5.13□□□□□ -1.59
USP33-201ENST00000357428 ARAP1Q96P48 1450 aa5.13□□□□□ -1.59
USP33-201ENST00000357428 PRXQ9BXM0 1461 aa5.13□□□□□ -1.59
USP33-201ENST00000357428 FMN1Q68DA7 1419 aa5.13□□□□□ -1.59
USP33-201ENST00000357428 RAB3GAP2Q9H2M9 1393 aa5.12□□□□□ -1.59
USP33-201ENST00000357428 CLSPNQ9HAW4 1339 aa5.12□□□□□ -1.59
USP33-201ENST00000357428 SETD5Q9C0A6 1442 aa5.12□□□□□ -1.59
USP33-201ENST00000357428 GAPVD1Q14C86 1478 aa5.11□□□□□ -1.59
USP33-201ENST00000357428 CFDP1Q9UEE9 299 aaPredicted RBP5.1□□□□□ -1.59
USP33-201ENST00000357428 TOPBP1Q92547 1522 aa5.1□□□□□ -1.59
USP33-201ENST00000357428 PLEKHD1A6NEE1 506 aa5.1□□□□□ -1.59
USP33-201ENST00000357428 SLC4A1APQ9BWU0 796 aaKnown RBP5.1□□□□□ -1.59
USP33-201ENST00000357428 DHX57Q6P158 1386 aaKnown RBP5.09□□□□□ -1.59
USP33-201ENST00000357428 BIVM-ERCC5R4GMW8 1640 aa5.09□□□□□ -1.59
USP33-201ENST00000357428 TSPY4P0CV99 314 aa5.09□□□□□ -1.59
USP33-201ENST00000357428 TSPY10P0CW01 314 aa5.09□□□□□ -1.59
USP33-201ENST00000357428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.09□□□□□ -1.594e-13■□□□□ 11.1
USP33-201ENST00000357428 POLA1P09884 1462 aaPredicted RBP5.09□□□□□ -1.59
USP33-201ENST00000357428 ERICH6Q7L0X2 663 aa5.09□□□□□ -1.59
USP33-201ENST00000357428 KCNH8Q96L42 1107 aa5.08□□□□□ -1.6
USP33-201ENST00000357428 DNAJC5BQ9UF47 199 aa5.08□□□□□ -1.6
USP33-201ENST00000357428 DNMBPQ6XZF7 1577 aa5.08□□□□□ -1.6
USP33-201ENST00000357428 AQRO60306 1485 aaKnown RBP eCLIP5.07□□□□□ -1.62e-6■■□□□ 13.6
USP33-201ENST00000357428 KDM2AQ9Y2K7 1162 aa5.07□□□□□ -1.6
USP33-201ENST00000357428 PHLDB1Q86UU1 1377 aa5.07□□□□□ -1.6
USP33-201ENST00000357428 LRRC9Q6ZRR7 1453 aa5.06□□□□□ -1.6
USP33-201ENST00000357428 EIF4G2P78344 907 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP33-201ENST00000357428 HNRNPUQ00839 825 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP33-201ENST00000357428 FOXD1Q16676 465 aa5.05□□□□□ -1.6
USP33-201ENST00000357428 CARMIL2Q6F5E8 1435 aa5.05□□□□□ -1.6
USP33-201ENST00000357428 FAM9BQ8IZU0 186 aa5.05□□□□□ -1.6
USP33-201ENST00000357428 ABCA10Q8WWZ4 1543 aa5.04□□□□□ -1.6
USP33-201ENST00000357428 FKBP8Q14318 412 aa5.04□□□□□ -1.6
USP33-201ENST00000357428 RRBP1Q9P2E9 1410 aaKnown RBP5.04□□□□□ -1.6
USP33-201ENST00000357428 CASKIN1Q8WXD9 1431 aa5.04□□□□□ -1.6
USP33-201ENST00000357428 TIAM1Q13009 1591 aa5.04□□□□□ -1.6
USP33-201ENST00000357428 CCDC18Q5T9S5 1454 aa5.04□□□□□ -1.6
USP33-201ENST00000357428 FYCO1Q9BQS8 1478 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 LAMC3Q9Y6N6 1575 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 FGD6Q6ZV73 1430 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 NPM1P06748 294 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP33-201ENST00000357428 MRC2Q9UBG0 1479 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 EFCAB5A4FU69 1503 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 CHGAP10645 457 aaKnown RBP5.03□□□□□ -1.6
USP33-201ENST00000357428 RGL3Q3MIN7 710 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 MRS2Q9HD23 443 aa5.03□□□□□ -1.6
USP33-201ENST00000357428 PCF11O94913 1555 aaKnown RBP5.03□□□□□ -1.6
USP33-201ENST00000357428 URB2Q14146 1524 aaKnown RBP5.02□□□□□ -1.61
USP33-201ENST00000357428 JPH4Q96JJ6 628 aa5.02□□□□□ -1.61
USP33-201ENST00000357428 PRDM2Q13029 1718 aa5.02□□□□□ -1.61
USP33-201ENST00000357428 GRIN2BQ13224 1484 aa5.02□□□□□ -1.61
USP33-201ENST00000357428 TIMELESSQ9UNS1 1208 aa5.02□□□□□ -1.61
USP33-201ENST00000357428 NCOA2Q15596 1464 aa5.02□□□□□ -1.61
USP33-201ENST00000357428 MPHOSPH9Q99550 1183 aa5.01□□□□□ -1.61
USP33-201ENST00000357428 MYOM3Q5VTT5 1437 aa5.01□□□□□ -1.61
USP33-201ENST00000357428 PPP1R15AO75807 674 aaPredicted RBP5.01□□□□□ -1.61
USP33-201ENST00000357428 CUL7Q14999 1698 aa5.01□□□□□ -1.61
USP33-201ENST00000357428 HSPA5P11021 654 aaKnown RBP5□□□□□ -1.61
USP33-201ENST00000357428 PKD2Q13563 968 aa5□□□□□ -1.61
USP33-201ENST00000357428 SENP3-EIF4A1A0A087X0R7 540 aa5□□□□□ -1.61
USP33-201ENST00000357428 IRX6P78412 446 aaPredicted RBP4.99□□□□□ -1.61
USP33-201ENST00000357428 CARD11Q9BXL7 1154 aa4.99□□□□□ -1.61
USP33-201ENST00000357428 SALL2Q9Y467 1007 aaPredicted RBP4.99□□□□□ -1.61
USP33-201ENST00000357428 SNAPC4Q5SXM2 1469 aa4.99□□□□□ -1.61
USP33-201ENST00000357428 IFT140Q96RY7 1462 aa4.99□□□□□ -1.61
USP33-201ENST00000357428 ZNF644Q9H582 1327 aaPredicted RBP4.99□□□□□ -1.61
USP33-201ENST00000357428 TMC1Q8TDI8 760 aa4.99□□□□□ -1.61
USP33-201ENST00000357428 ANKRD30AQ9BXX3 1397 aa4.99□□□□□ -1.61
USP33-201ENST00000357428 HNRNPMP52272 730 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP33-201ENST00000357428 L3MBTL2Q969R5 705 aa4.98□□□□□ -1.61
USP33-201ENST00000357428 EHBP1L1Q8N3D4 1523 aa4.98□□□□□ -1.61
USP33-201ENST00000357428 NUP155O75694 1391 aa4.98□□□□□ -1.61
USP33-201ENST00000357428 SENP3Q9H4L4 574 aaPredicted RBP4.97□□□□□ -1.61
USP33-201ENST00000357428 DCAF11Q8TEB1 546 aa4.97□□□□□ -1.61
USP33-201ENST00000357428 CDK13Q14004 1512 aaKnown RBP4.97□□□□□ -1.61
USP33-201ENST00000357428 PTPRGP23470 1445 aa4.97□□□□□ -1.61
USP33-201ENST00000357428 IQGAP2Q13576 1575 aa4.97□□□□□ -1.61
USP33-201ENST00000357428 HECW1Q76N89 1606 aa4.97□□□□□ -1.61
USP33-201ENST00000357428 UACAQ9BZF9 1416 aa4.96□□□□□ -1.61
USP33-201ENST00000357428 SUPT6HQ7KZ85 1726 aaKnown RBP4.96□□□□□ -1.62
USP33-201ENST00000357428 ZNF608Q9ULD9 1512 aaPredicted RBP4.96□□□□□ -1.62
USP33-201ENST00000357428 MAP3K1Q13233 1512 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms