RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 TIAM1Q13009 1591 aa20.83■□□□□ 0.92
TOP3B-201ENST00000357179 MAPKBP1O60336 1514 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 NEFLP07196 543 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 IGF1RP08069 1367 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
TOP3B-201ENST00000357179 SETD5Q9C0A6 1442 aa20.73■□□□□ 0.91
TOP3B-201ENST00000357179 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
TOP3B-201ENST00000357179 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
TOP3B-201ENST00000357179 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
TOP3B-201ENST00000357179 ITGAEP38570 1179 aa20.69■□□□□ 0.9
TOP3B-201ENST00000357179 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
TOP3B-201ENST00000357179 CFAP43Q8NDM7 1665 aa20.68■□□□□ 0.9
TOP3B-201ENST00000357179 TIMELESSQ9UNS1 1208 aa20.66■□□□□ 0.9
TOP3B-201ENST00000357179 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
TOP3B-201ENST00000357179 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
TOP3B-201ENST00000357179 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
TOP3B-201ENST00000357179 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
TOP3B-201ENST00000357179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.6■□□□□ 0.89
TOP3B-201ENST00000357179 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.88
TOP3B-201ENST00000357179 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
TOP3B-201ENST00000357179 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
TOP3B-201ENST00000357179 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
TOP3B-201ENST00000357179 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.884e-7■■■■■ 29.7
TOP3B-201ENST00000357179 FYCO1Q9BQS8 1478 aa20.54■□□□□ 0.88
TOP3B-201ENST00000357179 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
TOP3B-201ENST00000357179 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
TOP3B-201ENST00000357179 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.87
TOP3B-201ENST00000357179 TRIM52Q96A61 297 aa20.52■□□□□ 0.87
TOP3B-201ENST00000357179 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.87
TOP3B-201ENST00000357179 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
TOP3B-201ENST00000357179 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
TOP3B-201ENST00000357179 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
TOP3B-201ENST00000357179 CC2D2AQ9P2K1 1620 aa20.46■□□□□ 0.87
TOP3B-201ENST00000357179 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
TOP3B-201ENST00000357179 CUL7Q14999 1698 aa20.44■□□□□ 0.86
TOP3B-201ENST00000357179 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
TOP3B-201ENST00000357179 FHOD3Q2V2M9 1422 aa20.42■□□□□ 0.86
TOP3B-201ENST00000357179 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
TOP3B-201ENST00000357179 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
TOP3B-201ENST00000357179 ANP32CO43423 234 aa20.4■□□□□ 0.86
TOP3B-201ENST00000357179 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
TOP3B-201ENST00000357179 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
TOP3B-201ENST00000357179 P3H3Q8IVL6 736 aa20.35■□□□□ 0.85
TOP3B-201ENST00000357179 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
TOP3B-201ENST00000357179 ERICH6BQ5W0A0 696 aa20.34■□□□□ 0.85
TOP3B-201ENST00000357179 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
TOP3B-201ENST00000357179 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
TOP3B-201ENST00000357179 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
TOP3B-201ENST00000357179 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
TOP3B-201ENST00000357179 UACAQ9BZF9 1416 aa20.33■□□□□ 0.85
TOP3B-201ENST00000357179 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.84
TOP3B-201ENST00000357179 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
TOP3B-201ENST00000357179 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
TOP3B-201ENST00000357179 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
TOP3B-201ENST00000357179 PTPN23Q9H3S7 1636 aa20.3■□□□□ 0.84
TOP3B-201ENST00000357179 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
TOP3B-201ENST00000357179 SAMD9Q5K651 1589 aa20.27■□□□□ 0.84
TOP3B-201ENST00000357179 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.83
TOP3B-201ENST00000357179 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
TOP3B-201ENST00000357179 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
TOP3B-201ENST00000357179 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
TOP3B-201ENST00000357179 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
TOP3B-201ENST00000357179 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
TOP3B-201ENST00000357179 NAIPQ13075 1403 aa20.22■□□□□ 0.83
TOP3B-201ENST00000357179 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
TOP3B-201ENST00000357179 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
TOP3B-201ENST00000357179 SUPT6HQ7KZ85 1726 aaKnown RBP20.2■□□□□ 0.83
TOP3B-201ENST00000357179 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
TOP3B-201ENST00000357179 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
TOP3B-201ENST00000357179 HIRIP3Q9BW71 556 aaPredicted RBP20.2■□□□□ 0.82
TOP3B-201ENST00000357179 LRRIQ1Q96JM4 1722 aa20.2■□□□□ 0.82
TOP3B-201ENST00000357179 KDM5BQ9UGL1 1544 aa20.19■□□□□ 0.82
TOP3B-201ENST00000357179 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
TOP3B-201ENST00000357179 NBR1Q14596 966 aa20.17■□□□□ 0.82
TOP3B-201ENST00000357179 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
TOP3B-201ENST00000357179 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
TOP3B-201ENST00000357179 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
TOP3B-201ENST00000357179 PAK3O75914 559 aaPredicted RBP20.15■□□□□ 0.82
TOP3B-201ENST00000357179 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.82
TOP3B-201ENST00000357179 TCOF1Q13428 1488 aaKnown RBP20.12■□□□□ 0.81
TOP3B-201ENST00000357179 AKNAQ7Z591 1439 aa20.12■□□□□ 0.81
TOP3B-201ENST00000357179 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
TOP3B-201ENST00000357179 HECW1Q76N89 1606 aa20.11■□□□□ 0.81
TOP3B-201ENST00000357179 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
TOP3B-201ENST00000357179 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
TOP3B-201ENST00000357179 NESP48681 1621 aa20.08■□□□□ 0.81
TOP3B-201ENST00000357179 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.8
TOP3B-201ENST00000357179 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
TOP3B-201ENST00000357179 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
TOP3B-201ENST00000357179 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
TOP3B-201ENST00000357179 DENND4BO75064 1496 aaPredicted RBP20.02■□□□□ 0.8
TOP3B-201ENST00000357179 IL27Q8NEV9 243 aa20.01■□□□□ 0.79
TOP3B-201ENST00000357179 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
TOP3B-201ENST00000357179 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
TOP3B-201ENST00000357179 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
TOP3B-201ENST00000357179 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
TOP3B-201ENST00000357179 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
TOP3B-201ENST00000357179 CNTLNQ9NXG0 1405 aa19.97■□□□□ 0.79
TOP3B-201ENST00000357179 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms